Richard D. Boyce

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 34

Top Topics

Decision Support

Biomedical Informatics

Type Definitions

Top Venues

J. Biomed. Informatics

Publications

Tiffany J. Callahan, Adrianne L. Stefanski, Jordan M. Wyrwa, Chenjie Zeng, Anna Ostropolets, Juan M. Banda, William A. Baumgartner Jr., Richard D. Boyce, Elena Casiraghi, Ben D. Coleman, Janine H. Collins, Sara J. Deakyne Davies, James A. Feinstein, Asiyah Y. Lin, Blake Martin, Nicolas A. Matentzoglu, Daniella Meeker, Justin T. Reese, Jessica Sinclair, Sanya Bathla Taneja, Katy E. Trinkley, Nicole A. Vasilevsky, Andrew E. Williams, Xingmin Aaron Zhang, Joshua C. Denny, Patrick B. Ryan, George Hripcsak, Tellen D. Bennett, Melissa A. Haendel, Peter N. Robinson, Lawrence E. Hunter, Michael G. Kahn
Ontologizing health systems data at scale: making translational discovery a reality. npj Digit. Medicine 6 (2023)
Scott A. Malec, Sanya Bathla Taneja, Steven M. Albert, C. Elizabeth Shaaban, Helmet T. Karim, Arthur S. Levine, Paul Munro, Tiffany J. Callahan, Richard D. Boyce
Causal feature selection using a knowledge graph combining structured knowledge from the biomedical literature and ontologies: A use case studying depression as a risk factor for Alzheimer's disease. J. Biomed. Informatics 142 (2023)
Sanya Bathla Taneja, Tiffany J. Callahan, Mary F. Paine, Sandra L. Kane-Gill, Halil Kilicoglu, Marcin P. Joachimiak, Richard D. Boyce
Developing a Knowledge Graph for Pharmacokinetic Natural Product-Drug Interactions. J. Biomed. Informatics 140 (2023)
Tiffany J. Callahan, Ignacio J. Tripodi, Adrianne L. Stefanski, Luca Cappelletti, Sanya Bathla Taneja, Jordan M. Wyrwa, Elena Casiraghi, Nicolas A. Matentzoglu, Justin T. Reese, Jonathan C. Silverstein, Charles Tapley Hoyt, Richard D. Boyce, Scott A. Malec, Deepak R. Unni, Marcin P. Joachimiak, Peter N. Robinson, Christopher J. Mungall, Emanuele Cavalleri, Tommaso Fontana, Giorgio Valentini, Marco Mesiti, Lucas A. Gillenwater, Brook E. Santangelo, Nicole A. Vasilevsky, Robert Hoehndorf, Tellen D. Bennett, Patrick B. Ryan, George Hripcsak, Michael G. Kahn, Michael Bada, William A. Baumgartner Jr., Lawrence E. Hunter
An Open-Source Knowledge Graph Ecosystem for the Life Sciences. CoRR (2023)
Richard D. Boyce, Olga Kravchenko, Subashan Perera, Jordan F. Karp, Sandra L. Kane-Gill, Charles F. Reynolds, Steven M. Albert, Steven M. Handler
Falls prediction using the nursing home minimum dataset. J. Am. Medical Informatics Assoc. 29 (9) (2022)
Tiffany J. Callahan, Adrianne L. Stefanski, Jordan M. Wyrwa, Chenjie Zeng, Anna Ostropolets, Juan M. Banda, William A. Baumgartner Jr., Richard D. Boyce, Elena Casiraghi, Ben D. Coleman, Janine H. Collins, Sara J. Deakyne Davies, James A. Feinstein, Melissa A. Haendel, Asiyah Y. Lin, Blake Martin, Nicolas Matentzoglu, Daniella Meeker, Justin Reese, Jessica Sinclair, Sanya Bathla Taneja, Katy E. Trinkley, Nicole A. Vasilevsky, Andrew E. Williams, Xingman A. Zhang, Peter N. Robinson, Patrick Ryan, George Hripcsak, Tellen D. Bennett, Lawrence E. Hunter, Michael G. Kahn
Ontologizing Health Systems Data at Scale: Making Translational Discovery a Reality. CoRR (2022)
Tanupat Boonchalermvichien, Sanya Bathla Taneja, Sandra Clark Karcher, Richard D. Boyce
Standardizing Natural Products in Adverse Event Reports with Siamese Recurrent Networks. AMIA (2022)
Sanya Bathla Taneja, Tiffany J. Callahan, Mary F. Paine, Sandra L. Kane-Gill, Halil Kilicoglu, Marcin P. Joachimiak, Richard D. Boyce
Developing a Knowledge Graph Framework for Pharmacokinetic Natural Product-Drug Interactions. CoRR (2022)
Ainhoa Gomez Lumbreras, Thomas J. Reese, Guilherme Del Fiol, Jason Hurwitz, Kensaku Kawamoto, Mary Brown, Richard D. Boyce, Daniel C. Malone
Evaluation of Shared Decision-Making for Concomitant Warfarin and NSAID Medications using the DDInteract App. AMIA (2022)
Henrik Thiess, Guilherme Del Fiol, Daniel C. Malone, Ryan Cornia, Max Sibilla, Bryn Rhodes, Richard D. Boyce, Kensaku Kawamoto, Thomas J. Reese
Coordinated use of Health Level 7 standards to support clinical decision support: Case study with shared decision making and drug-drug interactions. Int. J. Medical Informatics 162 (2022)
Chenyu Li, Israel Dilan-Pantojas, Shyam Visweswaran, Michael J. Becich, Xia Jiang, Richard D. Boyce
Developing and Evaluation of Computational Phenotypes of Metastatic Breast Cancer Using All of Us Data. AMIA (2022)
Sanya Bathla Taneja, Richard D. Boyce, William T. Reynolds, Denis Newman-Griffis
Introducing Information Retrieval for Biomedical Informatics Students. CoRR (2021)
Scott A. Malec, Peng Wei, Elmer V. Bernstam, Richard D. Boyce, Trevor Cohen
Using computable knowledge mined from the literature to elucidate confounders for EHR-based pharmacovigilance. J. Biomed. Informatics 117 (2021)
Lorenzo Villa Zapata, Vignesh Subbian, Richard D. Boyce, Philip D. Hansten, John R. Horn, Sheila M. Gephart, Andrew Romero, Daniel C. Malone
Overriding Drug-Drug Interaction Alerts in Clinical Decision Support Systems: A Scoping Review. MedInfo (2021)
Linh K. Hoang, Richard D. Boyce, Nigel Bosch, Britney Stottlemyer, Mathias Brochhausen, Jodi Schneider
Automatically classifying the evidence type of drug-drug interaction research papers as a step toward computer supported evidence curation. AMIA (2020)
Yingci Liu, Smitha Edakalavan, Richard D. Boyce
Mapping Dental Diagnostic Concepts to SNOMED CT: A Pilot Study. AMIA (2020)
Amy J. Grizzle, Lisa E. Hines, Daniel C. Malone, Olga Kravchenko, Harry Hochheiser, Richard D. Boyce
Testing the face validity and inter-rater agreement of a simple approach to drug-drug interaction evidence assessment. J. Biomed. Informatics 101 (2020)
Y. Ye, Richard D. Boyce, M. K. Davis, K. Elliston, Christos Davatzikos, Andrey Fedorov, Jean-Christophe Fillion-Robin, Ian T. Foster, John R. Gilbertson, Mervi Heiskanen, Juli D. Klemm, Andras Lasso, James V. Miller, M. Morgan, Steve Pieper, B. Raumann, B. Sarachan, G. Savova, Jonathan C. Silverstein, D. Taylor, J. Zelnis, G. Q. Zhang, Michael J. Becich
Open Source Software Sustainability Models: Initial White Paper from the Information Technology for Cancer Research Sustainability and Industry Partnership Work Group. CoRR (2019)
Linh Hoang, Richard D. Boyce, Mathias Brochhausen, Joseph Utecht, Jodi Schneider
A Proposal for Determining the Evidence Types of Biomedical Documents Using a Drug-drug Interaction Ontology and Machine Learning. AAAI Spring Symposium: Combining Machine Learning with Knowledge Engineering (2019)
Binh-Phi Nguyen, Thomas J. Reese, Stefan Decker, Daniel C. Malone, Richard D. Boyce, Oya Beyan
Implementation of Clinical Decision Support Services to Detect Potential Drug-Drug Interaction Using Clinical Quality Language. MedInfo (2019)
Dina Demner-Fushman, Kin Wah Fung, Phong Do, Richard D. Boyce, Travis R. Goodwin
Overview of the TAC 2018 Drug-Drug Interaction Extraction from Drug Labels Track. TAC (2018)
Dina Demner-Fushman, Joseph M. Tonning, Kin Wah Fung, Phong Do, Richard D. Boyce, Kirk Roberts
Adverse Reactions and Drug-Drug Interaction Extraction tracks at the Text Analysis Conference (TAC). AMIA (2018)
Richard D. Boyce, Isabelle Ragueneau-Majlessi, Jingjing Yu, Jessica Sontheimer, Chris Kinsella, Eric Chou, Mathias Brochhausen, John Judkins, Brandon T. Gufford, Bruce Pinkleton, Rebecca L. Cooney, Mary Paine, Jeannine S. McCune
Developing User Personas to Aid in the Design of a User-Centered Natural Product-Drug Interaction Information Resource for Researchers. AMIA (2018)
John Judkins, Jessica Tay-Sontheimer, Richard D. Boyce, Mathias Brochhausen
Extending the DIDEO ontology to include entities from the natural product drug interaction domain of discourse. J. Biomed. Semant. 9 (1) (2018)
Katrina M. Romagnoli, Richard D. Boyce, Philip E. Empey, Yifan Ning, Solomon Adams, Harry Hochheiser
Design and evaluation of a pharmacogenomics information resource for pharmacists. J. Am. Medical Informatics Assoc. 24 (4) (2017)
Samuel C. Rosko, Philip Hansten, John R. Horn, Daniel C. Malone, Andrew Romero, Richard D. Boyce
Toward shareable individualized drug interaction alerts. CRI (2017)
Nikola Milosevic, Anay Gupta, Austin Chen, Steven DeMarco, Joshua P. Le, Jodi Schneider, Yifan Ning, Goran Nenadic, Richard D. Boyce
Extraction of Drug-Drug Interactions from Drug Product Labeling Tables. CRI (2017)
Erica A. Voss, Richard D. Boyce, Patrick B. Ryan, Johan van der Lei, Peter R. Rijnbeek, Martijn J. Schuemie
Accuracy of an automated knowledge base for identifying drug adverse reactions. J. Biomed. Informatics 66 (2017)
Richard D. Boyce, Erica A. Voss, Vojtech Huser, Lee Evans, Christian G. Reich, Jon D. Duke, Nicholas P. Tatonetti, Tal Lorberbaum, Michel Dumontier, Manfred Hauben, Magnus Wallberg, Lili Peng, Sara Dempster, Yongqun He, Anthony G. Sena, Vassilis Koutkias, Pantelis Natsiavas, Patrick B. Ryan
Large-scale adverse effects related to treatment evidence standardization (LAERTES): an open scalable system for linking pharmacovigilance evidence sources with clinical data. J. Biomed. Semant. 8 (1) (2017)
Joseph Utecht, Mathias Brochhausen, John Judkins, Jodi Schneider, Richard D. Boyce
Formalizing Evidence Type Definitions for Drug-Drug Interaction Studies to Improve Evidence Base Curation. MedInfo (2017)
Richard D. Boyce, Isabelle Ragueneau-Majlessi, Jingjing Yu, Jessica Sontheimer, Chris Kinsella, Mathias Brochhausen, John Judkins, Bruce Pinkleton, Rebecca L. Cooney, Mary Paine, Jeannine McCune
Toward a reliable and interoperable public repository for natural product drug interaction study data. AMIA (2017)
Katrina M. Romagnoli, Scott D. Nelson, Lisa Hines, Philip E. Empey, Richard D. Boyce, Harry Hochheiser
Information needs for making clinical recommendations about potential drug-drug interactions: a synthesis of literature review and interviews. BMC Medical Informatics Decis. Mak. 17 (1) (2017)
Katrina M. Romagnoli, Richard D. Boyce, Philip E. Empey, Solomon Adams, Harry Hochheiser
Bringing clinical pharmacogenomics information to pharmacists: A qualitative study of information needs and resource requirements. Int. J. Medical Informatics 86 (2016)
Mathias Brochhausen, Philip E. Empey, Jodi Schneider, William R. Hogan, Richard D. Boyce
Adding Evidence Type Representation to DIDEO. ICBO/BioCreative (2016)
Jon D. Duke, Frank J. DeFalco, Chris Knoll, Vojtech Huser, Richard D. Boyce, Patrick B. Ryan
OHDSI: An Open-Source Platform for Observational Data Analytics and Collaborative Research. AMIA (2015)
Jodi Schneider, Mathias Brochhausen, Samuel Rosko, Paolo Ciccarese, William R. Hogan, Daniel C. Malone, Yifan Ning, Tim Clark, Richard D. Boyce
Formalizing Knowledge and Evidence about Potential Drug-drug Interactions. BDM2I@ISWC (2015)
Matthias Samwald, José Antonio Miñarro-Giménez, Richard D. Boyce, Robert R. Freimuth, Klaus-Peter Adlassnig, Michel Dumontier
Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies. BMC Medical Informatics Decis. Mak. 15 (2015)
Serkan Ayvaz, John R. Horn, Oktie Hassanzadeh, Qian Zhu, Johann Stan, Nicholas P. Tatonetti, Santiago Vilar, Mathias Brochhausen, Matthias Samwald, Majid Rastegar-Mojarad, Michel Dumontier, Richard D. Boyce
Toward a complete dataset of drug-drug interaction information from publicly available sources. J. Biomed. Informatics 55 (2015)
Jodi Schneider, Paolo Ciccarese, Tim Clark, Richard D. Boyce
Using the Micropublications Ontology and the Open Annotation Data Model to Represent Evidence within a Drug-Drug Interaction Knowledge Base. LISC@ISWC (2014)
Matthias Samwald, Robert R. Freimuth, Joanne S. Luciano, Simon M. Lin, Robert L. Powers, M. Scott Marshall, Klaus-Peter Adlassnig, Michel Dumontier, Richard D. Boyce
An RDF/OWL Knowledge Base for Query Answering and Decision Support in Clinical Pharmacogenetics. MedInfo (2013)
Richard D. Boyce, John R. Horn, Oktie Hassanzadeh, Anita de Waard, Jodi Schneider, Joanne S. Luciano, Majid Rastegar-Mojarad, Maria Liakata
Dynamic enhancement of drug product labels to support drug safety, efficacy, and effectiveness. J. Biomed. Semant. 4 (2013)
Majid Rastegar-Mojarad, Richard D. Boyce, Rashmi Prasad
UWM-TRIADS: Classifying Drug-Drug Interactions with Two-Stage SVM and Post-Processing. SemEval@NAACL-HLT (2013)
M. Scott Marshall, Richard D. Boyce, Helena F. Deus, Jun Zhao, Egon L. Willighagen, Matthias Samwald, Elgar Pichler, Janos G. Hajagos, Eric Prud'hommeaux, Susie Stephens
Emerging practices for mapping and linking life sciences data using RDF - A case series. J. Web Semant. 14 (2012)
Richard D. Boyce, Carol Collins, John R. Horn, Ira Kalet
Computing with evidence: Part I: A drug-mechanism evidence taxonomy oriented toward confidence assignment. J. Biomed. Informatics 42 (6) (2009)
Richard D. Boyce, Carol Collins, John R. Horn, Ira Kalet
Computing with evidence: Part II: An evidential approach to predicting metabolic drug-drug interactions. J. Biomed. Informatics 42 (6) (2009)
Richard D. Boyce, Carol Collins, John R. Horn, Ira Kalet
Modeling Drug Mechanism Knowledge Using Evidence and Truth Maintenance. IEEE Trans. Inf. Technol. Biomed. 11 (4) (2007)
Richard D. Boyce, Carol Collins, John R. Horn, Ira J. Kalet
Qualitative Pharmacokinetic Modeling of Drugs. AMIA (2005)
Richard D. Boyce, Richard Chase
Conflation System MBP. CISST (2003)