Tim Clark

Publication Activity (10 Years)

Years Active: 2000-2021
Publications (10 Years): 8

Top Topics

Top Venues

J. Biomed. Semant.

Publications

Tim Clark
The FAIRSCAPE digital commons framework and Evidence Graphs for reproducibility (keynote). DISCO@JCDL (2021)
Paul Groth, Helena Cousijn, Tim Clark, Carole A. Goble
FAIR Data Reuse - the Path through Data Citation. Data Intell. 2 (1-2) (2020)
Daniel S. Katz, Neil P. Chue Hong, Tim Clark, Martin Fenner, Maryann E. Martone
Software and Data Citation. Comput. Sci. Eng. 22 (2) (2020)
Nick S. Juty, Sarala M. Wimalaratne, Stian Soiland-Reyes, John A. Kunze, Carole A. Goble, Tim Clark
Unique, Persistent, Resolvable: Identifiers as the Foundation of FAIR. Data Intell. 2 (1-2) (2020)
Daniel S. Katz, Daina Bouquin, Neil P. Chue Hong, Jessica Hausman, Catherine Jones, Daniel Chivvis, Tim Clark, Mercè Crosas, Stephan Druskat, Martin Fenner, Tom Gillespie, Alejandra N. González-Beltrán, Morane Gruenpeter, Ted Habermann, Robert Haines, Melissa Harrison, Edwin A. Henneken, Lorraine J. Hwang, Matthew B. Jones, Alastair A. Kelly, David N. Kennedy, Katrin Leinweber, Fernando Rios, Carly Robinson, Ilian T. Todorov, Mingfang Wu, Qian Zhang
Software Citation Implementation Challenges. CoRR (2019)
Mark D. Wilkinson, Ruben Verborgh, Luiz Olavo Bonino da Silva Santos, Tim Clark, Morris A. Swertz, Fleur D. L. Kelpin, Alasdair J. G. Gray, Erik A. Schultes, Erik M. van Mulligen, Paolo Ciccarese, Arnold Kuzniar, Anand Gavai, Mark Thompson, Rajaram Kaliyaperumal, Jerven T. Bolleman, Michel Dumontier
Interoperability and FAIRness through a novel combination of Web technologies. PeerJ Prepr. 5 (2017)
Mark D. Wilkinson, Ruben Verborgh, Luiz Olavo Bonino da Silva Santos, Tim Clark, Morris A. Swertz, Fleur D. L. Kelpin, Alasdair J. G. Gray, Erik A. Schultes, Erik M. van Mulligen, Paolo Ciccarese, Arnold Kuzniar, Anand Gavai, Mark Thompson, Rajaram Kaliyaperumal, Jerven T. Bolleman, Michel Dumontier
Interoperability and FAIRness through a novel combination of Web technologies. PeerJ Comput. Sci. 3 (2017)
Mark D. Wilkinson, Ruben Verborgh, Luiz Olavo Bonino da Silva Santos, Tim Clark, Morris A. Swertz, Fleur D. L. Kelpin, Alasdair J. G. Gray, Erik A. Schultes, Erik M. van Mulligen, Paolo Ciccarese, Mark Thompson, Rajaram Kaliyaperumal, Jerven T. Bolleman, Michel Dumontier
Interoperability and FAIRness through a novel combination of Web technologies. PeerJ Prepr. 4 (2016)
Jodi Schneider, Mathias Brochhausen, Samuel Rosko, Paolo Ciccarese, William R. Hogan, Daniel C. Malone, Yifan Ning, Tim Clark, Richard D. Boyce
Formalizing Knowledge and Evidence about Potential Drug-drug Interactions. BDM2I@ISWC (2015)
Joan Starr, Eleni Castro, Mercè Crosas, Michel Dumontier, Robert R. Downs, Ruth E. Duerr, Laurel L. Haak, Melissa A. Haendel, Iván Herman, Simon Hodson, Joe Hourclé, John Ernest Kratz, Jennifer Lin, Lars Holm Nielsen, Amy Nurnberger, Stefan Pröll, Andreas Rauber, Simone Sacchi, Arthur P. Smith, Michael Taylor, Tim Clark
Achieving human and machine accessibility of cited data in scholarly publications. PeerJ Prepr. 3 (2015)
Joan Starr, Eleni Castro, Mercè Crosas, Michel Dumontier, Robert R. Downs, Ruth E. Duerr, Laurel L. Haak, Melissa A. Haendel, Iván Herman, Simon Hodson, Joe Hourclé, John Ernest Kratz, Jennifer Lin, Lars Holm Nielsen, Amy Nurnberger, Stefan Pröll, Andreas Rauber, Simone Sacchi, Arthur P. Smith, Michael Taylor, Tim Clark
Achieving human and machine accessibility of cited data in scholarly publications. PeerJ Comput. Sci. 1 (2015)
Tim Clark, Carsten Keßler, Hemant Purohit
Feasibility of Information Interoperability in the Humanitarian Domain. AAAI Spring Symposia (2015)
Tim Clark, Marco Roos
Recent applications of web semantics in eLifeScience. J. Web Semant. 29 (2014)
Tim Clark
Simulating "soft" electronics. J. Cheminformatics 6 (S-1) (2014)
Tim Clark, Paolo Ciccarese, Carole A. Goble
Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications. J. Biomed. Semant. 5 (2014)
Jodi Schneider, Paolo Ciccarese, Tim Clark, Richard D. Boyce
Using the Micropublications Ontology and the Open Annotation Data Model to Represent Evidence within a Drug-Drug Interaction Knowledge Base. LISC@ISWC (2014)
Tim Clark
Next Generation Scientific Publishing and the Web of Data. Semantic Web 5 (4) (2014)
Emily Merrill, Stephane Corlosquet, Paolo Ciccarese, Tim Clark, Sudeshna Das
Semantic Web repositories for genomics data using the eXframe platform. J. Biomed. Semant. 5 (S-1) (2014)
Paolo Ciccarese, David M. Shotton, Silvio Peroni, Tim Clark
CiTO + SWAN: The web semantics of bibliographic records, citations, evidence and discourse relationships. Semantic Web 5 (4) (2014)
Paolo Ciccarese, Tim Clark
Annotopia: An Open Source Universal Annotation Server for Biomedical Research. SWAT4LS (2014)
Emily Merrill, Shannan Ho Sui, Stephane Corlosquet, Tim Clark, Sudeshna Das
Using eXframe to Build Semantic Web Genomics Repositories. SWAT4LS (2014)
Sudeshna Das, Patricia G. Mccaffrey, Megan Talkington, Neil Andrews, Stephane Corlosquet, Adrian Ivinson, Tim Clark
Pain Research Forum: application of scientific social media frameworks in neuroscience. Frontiers Neuroinformatics 8 (2014)
Paolo Ciccarese, Stian Soiland-Reyes, Khalid Belhajjame, Alasdair J. G. Gray, Carole A. Goble, Tim Clark
PAV ontology: provenance, authoring and versioning. J. Biomed. Semant. 4 (2013)
Paolo Ciccarese, Stian Soiland-Reyes, Tim Clark
Web Annotation as a First-Class Object. IEEE Internet Comput. 17 (6) (2013)
Paolo Ciccarese, Stian Soiland-Reyes, Khalid Belhajjame, Alasdair J. G. Gray, Carole A. Goble, Tim Clark
PAV ontology: Provenance, Authoring and Versioning CoRR (2013)
Tim Clark, Paolo Ciccarese, Carole A. Goble
Micropublications: a Semantic Model for Claims, Evidence, Arguments and Annotations in Biomedical Communications CoRR (2013)
Paolo Ciccarese, Stian Soiland-Reyes, Tim Clark
Web Annotation as a First Class Object. CoRR (2013)
Anita E. Bandrowski, Jonathan Cachat, Yuling Li, Hans-Michael Müller, Paul W. Sternberg, Paolo Ciccarese, Tim Clark, Luis N. Marenco, Rixin Wang, Vadim Astakhov, Jeffrey S. Grethe, Maryann E. Martone
A hybrid human and machine resource curation pipeline for the Neuroscience Information Framework. Database J. Biol. Databases Curation 2012 (2012)
Paolo Ciccarese, Marco Ocana, Tim Clark
Open semantic annotation of scientific publications using DOMEO. J. Biomed. Semant. 3 (S-1) (2012)
Paolo Ciccarese, Marco Ocana, Leyla Jael García Castro, Sudeshna Das, Tim Clark
An open annotation ontology for science on web 3.0. J. Biomed. Semant. 2 (S-2) (2011)
Tim Clark, Anita de Waard, Ivan Herman, Eduard H. Hovy
The Future of Research Communication (Dagstuhl Perspectives Workshop 11331). Dagstuhl Reports 1 (8) (2011)
Joanne S. Luciano, Bosse Andersson, Colin R. Batchelor, Olivier Bodenreider, Tim Clark, Christine K. Denney, Christopher Domarew, Thomas Gambet, Lee Harland, Anja Jentzsch, Vipul Kashyap, Peter J. Kos, Julia Kozlovsky, Timothy Lebo, M. Scott Marshall, Jamie P. McCusker, Deborah L. McGuinness, Chimezie Ogbuji, Elgar Pichler, Robert L. Powers, Eric Prud'hommeaux, Matthias Samwald, Lynn M. Schriml, Peter J. Tonellato, Patricia L. Whetzel, Jun Zhao, Susie Stephens, Michel Dumontier
The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside. J. Biomed. Semant. 2 (S-2) (2011)
Stephane Corlosquet, Renaud Delbru, Tim Clark, Axel Polleres, Stefan Decker
Produce and Consume Linked Data with Drupal! ISWC (2009)
Mark Goetz, Tim Clark, Sudeshna Das, Lisa Girard
Scientific publications on Web 3.0. ELPUB (2009)
Sudeshna Das, Lisa Girard, Tom Green, Louis Weitzman, Alister Lewis-Bowen, Tim Clark
Building biomedical web communities using a semantically aware content management system. Briefings Bioinform. 10 (2) (2009)
Paolo Ciccarese, Elizabeth Wu, Gwendolyn T. Wong, Marco Ocana, June Kinoshita, Alan Ruttenberg, Tim Clark
The SWAN biomedical discourse ontology. J. Biomed. Informatics 41 (5) (2008)
Alan Ruttenberg, Tim Clark, William J. Bug, Matthias Samwald, Olivier Bodenreider, Helen Chen, Donald Doherty, Kerstin Forsberg, Yong Gao, Vipul Kashyap, June Kinoshita, Joanne Luciano, M. Scott Marshall, Chimezie Ogbuji, Jonathan Rees, Susie Stephens, Gwendolyn T. Wong, Elizabeth Wu, Davide Zaccagnini, Tonya Hongsermeier, Eric Neumann, Ivan Herman, Kei-Hoi Cheung
Advancing translational research with the Semantic Web. BMC Bioinform. 8 (S-3) (2007)
Tim Clark, June Kinoshita
Alzforum and SWAN: the present and future of scientific web communities. Briefings Bioinform. 8 (3) (2007)
Tim Clark
Knowledge Integration in Biomedicine: Technology and Community. Briefings Bioinform. 8 (5) (2007)
Tim Clark
Knowledge Integration in Biomedicine: Technology and Community. Briefings Bioinform. 8 (3) (2007)
Hugo Y. K. Lam, Luis N. Marenco, Tim Clark, Yong Gao, June Kinoshita, Gordon M. Shepherd, Perry L. Miller, Elizabeth Wu, Gwendolyn T. Wong, Nian Liu, Chiquito J. Crasto, Thomas M. Morse, Susie Stephens, Kei-Hoi Cheung
AlzPharm: integration of neurodegeneration data using RDF. BMC Bioinform. 8 (S-3) (2007)
Yong Gao, June Kinoshita, Elizabeth Wu, Eric L. Miller, Ryan Lee, Andy Seaborne, Steve Cayzer, Tim Clark
SWAN: A distributed knowledge infrastructure for Alzheimer disease research. J. Web Semant. 4 (3) (2006)
Tim Clark, Sean Martin, Ted Liefeld
Globally distributed object identification for biological knowledgebases. Briefings Bioinform. 5 (1) (2004)
David Ficenec, Mark Osborne, Joël R. Pradines, Daniel R. Richards, Ramon M. Felciano, Raymond J. Cho, Richard O. Chen, Ted Liefeld, James Owen, Alan Ruttenberg, Christian G. Reich, Joseph Horvath, Tim Clark
Computational knowledge integration in biopharmaceutical research. Briefings Bioinform. 4 (3) (2003)
Tim Clark
Editorial: Identity and Interoperability in Bioinformatics. Briefings Bioinform. 4 (1) (2003)
Tim Clark
Virtual Private Networks with QoS. Inf. Secur. J. A Glob. Perspect. 9 (2) (2000)