Prashanti Manda

Publication Activity (10 Years)

Years Active: 2009-2023
Publications (10 Years): 24

Top Topics

Scientific Literature

Natural Language Processing Systems

Top Venues

Publications

Pratik Devkota, Somya D. Mohanty, Prashanti Manda
Ontology-Powered Boosting for Improved Recognition of Ontology Concepts from Biological Literature. BIOINFORMATICS (2023)
Ramin Homayouni, Prashanti Manda, Aik Choon Tan, Zhaohui S. Qin
Editorial: AI and data science in drug development and public health: Highlights from the MCBIOS 2022 conference. Frontiers Big Data 6 (2023)
Pratik Devkota, Somya D. Mohanty, Prashanti Manda
Using Ontology Embeddings With Deep Learning Architectures to Improve Prediction of Ontology Concepts From Literature. ICBO (2023)
Pratik Devkota, Somya D. Mohanty, Prashanti Manda
A Gated Recurrent Unit based architecture for recognizing ontology concepts from biological literature. BioData Min. 15 (1) (2022)
Somya D. Mohanty, Deborah Lekan, Thomas P. McCoy, Marjorie Jenkins, Prashanti Manda
Machine learning for predicting readmission risk among the frail: Explainable AI for healthcare. Patterns 3 (1) (2022)
Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T. Toby
Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference. Frontiers Artif. Intell. 5 (2022)
Prashanti Manda, Saed SayedAhmed, Somya D. Mohanty
Automated ontology-based annotation of scientific literature using deep learning. SBD@SIGMOD (2020)
Prashanti Manda
Data mining powered by the gene ontology. WIREs Data Mining Knowl. Discov. 10 (3) (2020)
Somya D. Mohanty, Thomas P. McCoy, Prashanti Manda, Deborah Lekan, Marjorie Jenkins
A multi-modal machine learning approach towards predicting patient readmission. BIBM (2020)
Prashanti Manda, Alexander Hahn, Katherine Beekman, Todd J. Vision
Avoiding "conflicts of interest": a computational approach to scheduling parallel conference tracks and its human evaluation. PeerJ Comput. Sci. 5 (2019)
Prashanti Manda, Alexander Hahn, Katherine Lamm, Scott Provan, Todd J. Vision
Avoiding "conflicts of interest": A computational approach to scheduling parallel conference tracks and its human evaluation. PeerJ Prepr. 7 (2019)
Prashanti Manda
Ontology-powered Semantic Similarity of Biological and Biomedical Entities - The Story So Far, and The Road Ahead. BIOINFORMATICS (2019)
Jonathan D. Wren, Robert J. Doerksen, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar
Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. BMC Bioinform. (2) (2019)
Lucas Beasley, Prashanti Manda
Comparison of natural language processing tools for automatic gene ontology annotation of scientific literature. PeerJ Prepr. 6 (2018)
Lucas Beasley, Prashanti Manda
Comparison of Natural Language Processing Tools for Automatic Gene Ontology Annotation of Scientific Literature. ICBO (2018)
Prashanti Manda, Lucas Beasley, Somya D. Mohanty
Taking a Dive: Experiments in Deep Learning for Automatic Ontology-Based Annotation of Scientific Literature. ICBO (2018)
Wasila M. Dahdul, Prashanti Manda, Hong Cui, James P. Balhoff, T. Alexander Dececchi, Nizar Ibrahim, Hilmar Lapp, Todd J. Vision, Paula M. Mabee
Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems. Database J. Biol. Databases Curation 2018 (2018)
Prashanti Manda, Todd J. Vision
On the Statistical Sensitivity of Semantic Similarity Metrics. ICBO (2018)
Prashanti Manda, Todd J. Vision
Evolution of anatomical concept usage over time: mining 200 years of biodiversity literature. SBD@SIGMOD (2017)
Alexander Hahn, Somya D. Mohanty, Prashanti Manda
What's Hot and What's Not? - Exploring Trends in Bioinformatics Literature Using Topic Modeling and Keyword Analysis. ISBRA (2017)
Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar
Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 18 (14) (2017)
Prashanti Manda, James P. Balhoff, Todd J. Vision
Measuring the Importance of Annotation Granularity to the Detection of Semantic Similarity Between Phenotype Profiles. ICBO/BioCreative (2016)
Anika Oellrich, Nigel Collier, Tudor Groza, Dietrich Rebholz-Schuhmann, Nigam Shah, Olivier Bodenreider, Mary Regina Boland, Ivo I. Georgiev, Hongfang Liu, Kevin M. Livingston, Augustin Luna, Ann-Marie Mallon, Prashanti Manda, Peter N. Robinson, Gabriella Rustici, Michelle Simon, Liqin Wang, Rainer Winnenburg, Michel Dumontier
The digital revolution in phenotyping. Briefings Bioinform. 17 (5) (2016)
Prashanti Manda, Christopher J. Mungall, James P. Balhoff, Hilmar Lapp, Todd J. Vision
Investigating the Importance of Anatomical Homology for Cross-Species Phenotype Comparisons Using Semantic Similarity. PSB (2016)
Prashanti Manda, Fiona M. McCarthy, Bindu Nanduri, Susan M. Bridges
Information Theoretic Interestingness Measures for Cross-Ontology Data Mining in the Mouse Anatomy Ontology and the Gene Ontology. CoRR (2015)
Prashanti Manda, Fiona M. McCarthy, Susan M. Bridges
Interestingness measures and strategies for mining multi-ontology multi-level association rules from gene ontology annotations for the discovery of new GO relationships. J. Biomed. Informatics 46 (5) (2013)
Fiona M. McCarthy, Cathy R. Gresham, Teresia J. Buza, Philippe Chouvarine, Lakshmi R. Pillai, Ranjit Kumar, Seval Ozkan, Hui Wang, Prashanti Manda, Tony Arick, Susan M. Bridges, Shane C. Burgess
AgBase: supporting functional modeling in agricultural organisms. Nucleic Acids Res. 39 (Database-Issue) (2011)
Prashanti Manda, McKinley G. Freeman, Susan M. Bridges, T. J. Jankun-Kelly, Bindu Nanduri, Fiona M. McCarthy, Shane C. Burgess
GOModeler- A tool for hypothesis-testing of functional genomics datasets. BMC Bioinform. 11 (S-6) (2010)
Bart H. J. van den Berg, Chamali Thanthiriwatte, Prashanti Manda, Susan M. Bridges
Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data. BMC Bioinform. 10 (S-11) (2009)