Huixiao Hong

Publication Activity (10 Years)

Years Active: 1990-2023
Publications (10 Years): 18

Top Topics

Highly Imbalanced

Frequent Subsequences

Top Venues

J. Chem. Inf. Model.

Frontiers Artif. Intell.

Publications

Huyen Le, Ru Chen, Stephen C. Harris, Hong Fang, Beverly Lyn-Cook, Huixiao Hong, Weigong Ge, Paul Rogers, Weida Tong, Wen Zou
RxNorm for drug name normalization: a case study of prescription opioids in the FDA adverse events reporting system. Frontiers Bioinform. 3 (2023)
Meng Song, Jonathan Greenbaum, Joseph Luttrell IV, Weihua Zhou, Chong Wu, Zhe Luo, Chuan Qiu, Lan-Juan Zhao, Kuan-Jui Su, Qing Tian, Hui Shen, Huixiao Hong, Ping Gong, Xinghua Shi, Hong-Wen Deng, Chaoyang Zhang
An autoencoder-based deep learning method for genotype imputation. Frontiers Artif. Intell. 5 (2022)
Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T. Toby
Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference. Frontiers Artif. Intell. 5 (2022)
Weizhong Zhao, Huyen Le, James J. Chen, Hesha J. Duggirala, Richard Forshee, Taxiarchis Botsis, Henry Francis, Huixiao Hong, Weida Tong, Yi-Ting Hwang, Wen Zou
Discovering Drug-Drug Associations in the FDA Adverse Event Reporting System Database with Data Mining Approaches. BIBM (2021)
Srilatha Sakamuru, Jinghua Zhao, Menghang Xia, Huixiao Hong, Anton Simeonov, Iosif I. Vaisman, Ruili Huang
Predictive Models to Identify Small Molecule Activators and Inhibitors of Opioid Receptors. J. Chem. Inf. Model. 61 (6) (2021)
Huyen Le, Junxiu Zhou, Weizhong Zhao, Roger Perkins, Weigong Ge, Beverly Lyn-Cook, Henry Francis, Huixiao Hong, Weida Tong, Wen Zou
Text Fingerprinting and Topic Mining in the Prescription Opioid Use Literature. BIBM (2021)
Gabriel Idakwo, Sundar Thangapandian, Joseph Luttrell IV, Yan Li, Nan Wang, Zhaoxian Zhou, Huixiao Hong, Bei Yang, Chaoyang Zhang, Ping Gong
Structure-activity relationship-based chemical classification of highly imbalanced Tox21 datasets. J. Cheminformatics 12 (1) (2020)
Sugunadevi Sakkiah, Carmine Leggett, Bohu Pan, Wenjing Guo, Luis G. Valerio, Huixiao Hong
Development of a Nicotinic Acetylcholine Receptor nAChR α7 Binding Activity Prediction Model. J. Chem. Inf. Model. 60 (4) (2020)
Bohu Pan, Rebecca Kusko, Wenming Xiao, Yuanting Zheng, Zhichao Liu, Chunlin Xiao, Sugunadevi Sakkiah, Wenjing Guo, Ping Gong, Chaoyang Zhang, Weigong Ge, Leming Shi, Weida Tong, Huixiao Hong
Similarities and differences between variants called with human reference genome HG19 or HG38. BMC Bioinform. (2) (2019)
Bohu Pan, Rebecca Kusko, Wenming Xiao, Yuanting Zheng, Zhichao Liu, Chunlin Xiao, Sugunadevi Sakkiah, Wenjing Guo, Ping Gong, Chaoyang Zhang, Weigong Ge, Leming Shi, Weida Tong, Huixiao Hong
Correction to: Similarities and differences between variants called with human reference genome HG19 or HG38. BMC Bioinform. 20 (1) (2019)
Ping Gong, Keri B. Donohue, Anne M. Mayo, Yuping Wang, Huixiao Hong, Mitchell S. Wilbanks, Natalie D. Barker, Xin Guan, Kurt A. Gust
Comparative toxicogenomics of three insensitive munitions constituents 2, 4-dinitroanisole, nitroguanidine and nitrotriazolone in the soil nematode Caenorhabditis elegans. BMC Syst. Biol. 12 (7) (2018)
Chuipu Cai, Jiansong Fang, Pengfei Guo, Qi Wang, Huixiao Hong, Javid Moslehi, Feixiong Cheng
In Silico Pharmacoepidemiologic Evaluation of Drug-Induced Cardiovascular Complications Using Combined Classifiers. J. Chem. Inf. Model. 58 (5) (2018)
Feixiong Cheng, Huixiao Hong, Sheng-Yong Yang, Yuquan Wei
Individualized network-based drug repositioning infrastructure for precision oncology in the panomics era. Briefings Bioinform. 18 (4) (2017)
Huixiao Hong, Carmine Leggett, Suguna Sakkiah
Development of Nicotinic Acetylcholine Receptor nAChR α7 Binding Activity Prediction Model: Coupling Machine Learning with Competitive Molecular Docking. BCB (2017)
Andrew S. Maxwell, Runzhi Li, Bei Yang, Heng Weng, Aihua Ou, Huixiao Hong, Zhaoxian Zhou, Ping Gong, Chaoyang Zhang
Deep learning architectures for multi-label classification of intelligent health risk prediction. BMC Bioinform. 18 (14) (2017)
Isaac Akogwu, Nan Wang, Chaoyang Zhang, Hwanseok Choi, Huixiao Hong, Ping Gong
Factorial analysis of error correction performance using simulated next-generation sequencing data. BIBM (2016)
Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou
Erratum to: A novel procedure on next generation sequencing data analysis using text mining algorithm. BMC Bioinform. 17 (2016)
Weizhong Zhao, James J. Chen, Roger Perkins, Yuping Wang, Zhichao Liu, Huixiao Hong, Weida Tong, Wen Zou
A novel procedure on next generation sequencing data analysis using text mining algorithm. BMC Bioinform. 17 (2016)
Heng Luo, Hao Ye, Hui Wen Ng, Leming Shi, Weida Tong, William Mattes, Donna Mendrick, Huixiao Hong
Understanding and predicting binding between human leukocyte antigens (HLAs) and peptides by network analysis. BMC Bioinform. 16 (S13) (2015)
Wenqian Zhang, Joe Meehan, Zhenqiang Su, Hui Wen Ng, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong, Huixiao Hong
Whole genome sequencing of 35 individuals provides insights into the genetic architecture of Korean population. BMC Bioinform. 15 (S-11) (2014)
Hui Wen Ng, Wenqian Zhang, Mao Shu, Heng Luo, Weigong Ge, Roger Perkins, Weida Tong, Huixiao Hong
Competitive molecular docking approach for predicting estrogen receptor subtype α agonists and antagonists. BMC Bioinform. 15 (S-11) (2014)
Jie Shen, Wenqian Zhang, Hong Fang, Roger Perkins, Weida Tong, Huixiao Hong
Homology modeling, molecular docking, and molecular dynamics simulations elucidated α-fetoprotein binding modes. BMC Bioinform. 14 (S-14) (2013)
Huixiao Hong, Qilong Hong, Jie Liu, Weida Tong, Leming Shi
Estimating relative noise to signal in DNA microarray data. Int. J. Bioinform. Res. Appl. 9 (5) (2013)
Don Ding, Lei Xu, Hong Fang, Huixiao Hong, Roger Perkins, Steve Harris, Edward D. Bearden, Leming Shi, Weida Tong
The EDKB: an established knowledge base for endocrine disrupting chemicals. BMC Bioinform. 11 (S-6) (2010)
Zhining Wen, Charles Wang, Quan Shi, Ying Huang, Zhenqiang Su, Huixiao Hong, Weida Tong, Leming Shi
microarrays using MAQC reference RNA samples. BMC Bioinform. 11 (S-6) (2010)
Joshua Xu, Carolyn Wise, Vijayalakshmi Varma, Hong Fang, Baitang Ning, Huixiao Hong, Weida Tong, Jim Kaput
Two new ArrayTrack libraries for personalized biomedical research. BMC Bioinform. 11 (S-6) (2010)
Huixiao Hong, Qilong Hong, Roger Perkins, Leming M. Shi, Hong Fang, Zhenqiang Su, Yvonne P. Dragan, James C. Fuscoe, Weida Tong
The Accurate Prediction of Protein Family from Amino Acid Sequence by Measuring Features of Sequence Fragments. J. Comput. Biol. 16 (12) (2009)
Huixiao Hong, Qilong Hong, Weida Tong
Accurate Prediction and Recognition of Subfamilies of G Protein-Coupled Receptors from Amino Acid Sequences. BIOCOMP (2009)
Huixiao Hong, Zhenqiang Su, Weigong Ge, Leming M. Shi, Roger Perkins, Hong Fang, Joshua Xu, James J. Chen, Tao Han, Jim Kaput, James C. Fuscoe, Weida Tong
Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples. BMC Bioinform. 9 (S-9) (2008)
Zhenqiang Su, Huixiao Hong, Hong Fang, Leming M. Shi, Roger Perkins, Weida Tong
Very Important Pool (VIP) genes - an application for microarray-based molecular signatures. BMC Bioinform. 9 (S-9) (2008)
Huixiao Hong, Qian Xie, Weigong Ge, Feng Qian, Hong Fang, Leming Shi, Zhenqiang Su, Roger Perkins, Weida Tong
, Molecular Descriptors from 2D Structures for Chemoinformatics and Toxicoinformatics. J. Chem. Inf. Model. 48 (7) (2008)
Zhenqiang Su, Huixiao Hong, Roger Perkins, Xueguang Shao, Wensheng Cai, Weida Tong
Consensus analysis of multiple classifiers using non-repetitive variables: Diagnostic application to microarray gene expression data. Comput. Biol. Chem. 31 (1) (2007)
Hideyuki Masui, Huixiao Hong
H NMR and H-H COSY Spectra in Organic Chemistry. J. Chem. Inf. Model. 46 (2) (2006)
Leming M. Shi, Weida Tong, Hong Fang, Uwe Scherf, Jing Han, Raj K. Puri, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, Zhenqiang Su, Tao Han, James C. Fuscoe, Z. Alex Xu, Tucker A. Patterson, Huixiao Hong, Qian Xie, Roger Perkins, James J. Chen, Daniel A. Casciano
Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential. BMC Bioinform. 6 (S-2) (2005)
Leming M. Shi, Weida Tong, Zhenqiang Su, Tao Han, Jing Han, Raj K. Puri, Hong Fang, Felix W. Frueh, Federico M. Goodsaid, Lei Guo, William S. Branham, James J. Chen, Z. Alex Xu, Stephen C. Harris, Huixiao Hong, Qian Xie, Roger Perkins, James C. Fuscoe
Microarray scanner calibration curves: characteristics and implications. BMC Bioinform. 6 (S-2) (2005)
Qian Xie, Luke D. Ratnasinghe, Huixiao Hong, Roger Perkins, Ze-Zhong Tang, Nan Hu, Philip R. Taylor, Weida Tong
Decision Forest Analysis of 61 Single Nucleotide Polymorphisms in a Case-Control Study of Esophageal Cancer; a novel method. BMC Bioinform. 6 (S-2) (2005)
Huixiao Hong, Yvonne P. Dragan, Joshua Epstein, Candee Teitel, Bangzheng Chen, Qian Xie, Hong Fang, Leming M. Shi, Roger Perkins, Weida Tong
Quality control and quality assessment of data from surface-enhanced laser desorption/ionization (SELDI) time-of flight (TOF) mass spectrometry (MS). BMC Bioinform. 6 (S-2) (2005)
Hong Fang, Weida Tong, Roger Perkins, Leming M. Shi, Huixiao Hong, X. Cao, Qian Xie, S. H. Yim, J. M. Ward, Henry C. Pitot, Yvonne P. Dragan
Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling. BMC Bioinform. 6 (S-2) (2005)
Weida Tong, Huixiao Hong, Hong Fang, Qian Xie, Roger Perkins
Decision Forest: Combining the Predictions of Multiple Independent Decision Tree Models. J. Chem. Inf. Comput. Sci. 43 (2) (2003)
Huixiao Hong, Han Yinling, Xin Xinquan, Shi Yufeng
ESSESA: An expert system for structure elucidation from spectra, 6. Substructure constraints from analysis of 13C-NMR spectra. J. Chem. Inf. Comput. Sci. 35 (6) (1995)
Huixiao Hong, Xin Xinquan
ESSESA: An Expert System for Structure Elucidation from Spectra. 4. Canonical Representation of Structures. J. Chem. Inf. Comput. Sci. 34 (4) (1994)
Huixiao Hong, Xin Xinquan
ESSESA: An Expert System for Structure Elucidation from Spectra. 5. Substructure Constraints from Analysis of First-Order 1H-NMR Spectra. J. Chem. Inf. Comput. Sci. 34 (6) (1994)
Huixiao Hong, Xin Xinquan
ESSESA: An expert system for structure elucidation from spectra. 3. LNSCS for chemical knowledge representation. J. Chem. Inf. Comput. Sci. 32 (1) (1992)
Huixiao Hong, Xin Xinquan
ESSESA: an expert system for elucidation of structures from spectra. 1. Knowledge base of infrared spectra and analysis and interpretation programs. J. Chem. Inf. Comput. Sci. 30 (3) (1990)