Mikhail G. Dozmorov

Publication Activity (10 Years)

Years Active: 2007-2024
Publications (10 Years): 16

Top Topics

Computational Biology

Top Venues

Briefings Bioinform.

Publications

Brydon P. G. Wall, My Nguyen, J. Chuck Harrell, Mikhail G. Dozmorov
Machine and deep learning methods for predicting 3D genome organization. CoRR (2024)
Jonathan D. Ogata, Wancen Mu, Eric S. Davis, Bingjie Xue, J. Chuck Harrell, Nathan C. Sheffield, Douglas H. Phanstiel, Michael I. Love, Mikhail G. Dozmorov
excluderanges: exclusion sets for T2T-CHM13, GRCm39, and other genome assemblies. Bioinform. 39 (4) (2023)
Eric S. Davis, Wancen Mu, Stuart Lee, Mikhail G. Dozmorov, Michael I. Love, Douglas H. Phanstiel
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling. Bioinform. 39 (5) (2023)
Wancen Mu, Eric S. Davis, Stuart Lee, Mikhail G. Dozmorov, Douglas H. Phanstiel, Michael I. Love
bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing. Bioinform. 39 (5) (2023)
Spiro C. Stilianoudakis, Maggie A. Marshall, Mikhail G. Dozmorov
preciseTAD: a transfer learning framework for 3D domain boundary prediction at base-pair resolution. Bioinform. 38 (3) (2022)
Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov
Correction to: SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering. BMC Bioinform. 21 (1) (2020)
Kellen Garrison Cresswell, John C. Stansfield, Mikhail G. Dozmorov
SpectralTAD: an R package for defining a hierarchy of topologically associated domains using spectral clustering. BMC Bioinform. 21 (1) (2020)
Mikhail G. Dozmorov, Kellen Garrison Cresswell, Silviu-Alin Bacanu, Carl F. Craver, Mark Reimers, Kenneth S. Kendler
A method for estimating coherence of molecular mechanisms in major human disease and traits. BMC Bioinform. 21 (1) (2020)
John C. Stansfield, Kellen Garrison Cresswell, Mikhail G. Dozmorov
multiHiCcompare: joint normalization and comparative analysis of complex Hi-C experiments. Bioinform. 35 (17) (2019)
Mikhail G. Dozmorov
Disease classification: from phenotypic similarity to integrative genomics and beyond. Briefings Bioinform. 20 (5) (2019)
John C. Stansfield, Kellen Garrison Cresswell, Vladimir I. Vladimirov, Mikhail G. Dozmorov
HiCcompare: an R-package for joint normalization and comparison of HI-C datasets. BMC Bioinform. 19 (1) (2018)
Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar
Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 18 (14) (2017)
Mikhail G. Dozmorov
Epigenomic annotation-based interpretation of genomic data: from enrichment analysis to machine learning. Bioinform. 33 (20) (2017)
Edmund R. Glass, Mikhail G. Dozmorov
Improving sensitivity of linear regression-based cell type-specific differential expression deconvolution with per-gene vs. global significance threshold. BMC Bioinform. 17 (S-13) (2016)
Jonathan D. Wren, Inimary T. Toby, Huxiao Hong, Bindu Nanduri, Rakesh Kaundal, Mikhail G. Dozmorov, Shraddha Thakkar
Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 17 (S-13) (2016)
Mikhail G. Dozmorov, Lukas R. Cara, Cory B. Giles, Jonathan D. Wren
GenomeRunner web server: regulatory similarity and differences define the functional impact of SNP sets. Bioinform. 32 (15) (2016)
Mikhail G. Dozmorov, Indra Adrianto, Cory B. Giles, Edmund R. Glass, Stuart B. Glenn, Courtney Montgomery, Kathy L. Sivils, Lorin E. Olson, Tomoaki Iwayama, Willard M. Freeman, Christopher J. Lessard, Jonathan D. Wren
Detrimental effects of duplicate reads and low complexity regions on RNA- and ChIP-seq data. BMC Bioinform. 16 (S13) (2015)
Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Andy D. Perkins, Chaoyang Zhang, Peter Hoyt, Rakesh Kaundal
Proceedings of the 2014 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 15 (S-11) (2014)
Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Rakesh Kaundal, Andy D. Perkins, Edward J. Perkins, Doris M. Kupfer, Gordon K. Springer
Proceedings of the 2013 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 14 (S-14) (2013)
Cory B. Giles, Reshmi Girijadevi, Mikhail G. Dozmorov, Jonathan D. Wren
mirCoX: a database of miRNA-mRNA expression correlations derived from RNA-seq meta-analysis. BMC Bioinform. 14 (S-14) (2013)
Mikhail G. Dozmorov, Cory B. Giles, Kristi A. Koelsch, Jonathan D. Wren
Systematic classification of non-coding RNAs by epigenomic similarity. BMC Bioinform. 14 (S-14) (2013)
Mikhail G. Dozmorov, Lukas R. Cara, Cory B. Giles, Jonathan D. Wren
: automating genome exploration. Bioinform. 28 (3) (2012)
Jonathan D. Wren, Mikhail G. Dozmorov, Dennis Burian, Rakesh Kaundal, Susan Bridges, Doris M. Kupfer
Proceedings of the 2012 MidSouth computational biology and bioinformatics society (MCBIOS) conference. BMC Bioinform. 13 (S-15) (2012)
Mikhail G. Dozmorov, Cory B. Giles, Jonathan D. Wren
Predicting gene ontology from a global meta-analysis of 1-color microarray experiments. BMC Bioinform. 12 (S-10) (2011)
Jonathan D. Wren, Doris M. Kupfer, Edward J. Perkins, Susan Bridges, Stephen Winters-Hilt, Mikhail G. Dozmorov, Ulisses M. Braga-Neto
Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 12 (S-10) (2011)
Mikhail G. Dozmorov, Jonathan D. Wren
High-throughput processing and normalization of one-color microarrays for transcriptional meta-analyses. BMC Bioinform. 12 (S-10) (2011)
Mikhail G. Dozmorov, Kimberly D. Kyker, Paul J. Hauser, Ricardo Saban, David D. Buethe, Igor Dozmorov, Michael Centola, Daniel J. Culkin, Robert E. Hurst
From microarray to biology: an integrated experimental, statistical and in silico analysis of how the extracellular matrix modulates the phenotype of cancer cells. BMC Bioinform. 9 (S-9) (2008)
Mikhail G. Dozmorov, Kimberly D. Kyker, Ricardo Saban, Nathan Shankar, Arto S. Baghdayan, Michael Centola, Robert E. Hurst
. BMC Bioinform. 8 (S-7) (2007)