Todd J. Vision

Publication Activity (10 Years)

Years Active: 2000-2019
Publications (10 Years): 8

Top Topics

Semantic Similarity

Similarity Metrics

Top Venues

J. Biomed. Semant.

Publications

Prashanti Manda, Alexander Hahn, Katherine Beekman, Todd J. Vision
Avoiding "conflicts of interest": a computational approach to scheduling parallel conference tracks and its human evaluation. PeerJ Comput. Sci. 5 (2019)
Prashanti Manda, Alexander Hahn, Katherine Lamm, Scott Provan, Todd J. Vision
Avoiding "conflicts of interest": A computational approach to scheduling parallel conference tracks and its human evaluation. PeerJ Prepr. 7 (2019)
Wasila M. Dahdul, Prashanti Manda, Hong Cui, James P. Balhoff, T. Alexander Dececchi, Nizar Ibrahim, Hilmar Lapp, Todd J. Vision, Paula M. Mabee
Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems. Database J. Biol. Databases Curation 2018 (2018)
Prashanti Manda, Todd J. Vision
On the Statistical Sensitivity of Semantic Similarity Metrics. ICBO (2018)
Paula M. Mabee, James P. Balhoff, Wasila M. Dahdul, Hilmar Lapp, Christopher J. Mungall, Todd J. Vision
Reasoning over Anatomical Homology in the Phenoscape KB. ICBO (2018)
Prashanti Manda, Todd J. Vision
Evolution of anatomical concept usage over time: mining 200 years of biodiversity literature. SBD@SIGMOD (2017)
Prashanti Manda, James P. Balhoff, Todd J. Vision
Measuring the Importance of Annotation Granularity to the Detection of Semantic Similarity Between Phenotype Profiles. ICBO/BioCreative (2016)
Prashanti Manda, Christopher J. Mungall, James P. Balhoff, Hilmar Lapp, Todd J. Vision
Investigating the Importance of Anatomical Homology for Cross-Species Phenotype Comparisons Using Semantic Similarity. PSB (2016)
Shea Swauger, Todd J. Vision
What Factors Influence Where Researchers Deposit their Data? A Survey of Researchers Submitting to Data Repositories. Int. J. Digit. Curation 10 (1) (2015)
James P. Balhoff, Wasila M. Dahdul, Thomas Dececchi, Hilmar Lapp, Paula M. Mabee, Todd J. Vision
Annotation of phenotypic diversity: decoupling data curation and ontology curation using Phenex. J. Biomed. Semant. 5 (2014)
Martin Fenner, Laurel L. Haak, Gudmundur A. Thorisson, Sergio Ruiz, Todd J. Vision, Jan Brase
ODIN: the ORCID and DataCite interoperability network. Int. J. Knowl. Learn. 9 (4) (2014)
Peter E. Midford, Thomas Dececchi, James P. Balhoff, Wasila M. Dahdul, Nizar Ibrahim, Hilmar Lapp, John G. Lundberg, Paula M. Mabee, Paul C. Sereno, Monte Westerfield, Todd J. Vision, David C. Blackburn
The vertebrate taxonomy ontology: a framework for reasoning across model organism and species phenotypes. J. Biomed. Semant. 4 (2013)
Éva Czabarka, László A. Székely, Todd J. Vision
Minimizing the number of episodes and Gallai's theorem on intervals CoRR (2012)
William Michener, David Vieglais, Todd J. Vision, John A. Kunze, Patricia Cruse, Greg Janée
DataONE: Data Observation Network for Earth - Preserving Data and Enabling Innovation in the Biological and Environmental Sciences. D Lib Mag. 17 (1/2) (2011)
James P. Balhoff, Wasila M. Dahdul, Hilmar Lapp, Peter E. Midford, Todd J. Vision, Monte Westerfield, Paula M. Mabee
Employing Reasoning within the Phenoscape Knowledgebase. ICBO (2011)
Wasila M. Dahdul, James P. Balhoff, Hilmar Lapp, Peter E. Midford, Todd J. Vision, Monte Westerfield, Paula M. Mabee
Phenoscape: Use Cases and Anatomy Ontology Requirements for Linking Evolutionary and Model Organism Phenotypes. ICBO (2011)
Todd J. Vision, Judith A. Blake, Hilmar Lapp, Paula M. Mabee, Monte Westerfield
Similarity Between Semantic Description Sets: Addressing Needs Beyond Data Integration. LISC (2011)
Heather A. Piwowar, Jonathan D. Carlson, Todd J. Vision
Beginning to track 1000 datasets from public repositories into the published literature. ASIST (2011)
J. Gordon Burleigh, Mukul S. Bansal, Oliver Eulenstein, Todd J. Vision
Inferring species trees from gene duplication episodes. BCB (2010)
Nicholas M. Weber, Heather A. Piwowar, Todd J. Vision
Evaluating data citation and sharing policies in the environmental sciences. ASIST (2010)
Fuxia Cheng, Stefanie Hartmann, Mayetri Gupta, Joseph G. Ibrahim, Todd J. Vision
A hierarchical model for incomplete alignments in phylogenetic inference. Bioinform. 25 (5) (2009)
Bradley M. Hemminger, Billy Saelim, Patrick F. Sullivan, Todd J. Vision
Comparison of full-text searching to metadata searching for genes in two biomedical literature cohorts. J. Assoc. Inf. Sci. Technol. 58 (14) (2007)
Kyle J. Gaulton, Karen L. Mohlke, Todd J. Vision
A computational system to select candidate genes for complex human traits. Bioinform. 23 (9) (2007)
Stefanie Hartmann, Dihui Lu, Jason Phillips, Todd J. Vision
Phytome: a platform for plant comparative genomics. Nucleic Acids Res. 34 (Database-Issue) (2006)
Peter P. Calabrese, Sugata Chakravarty, Todd J. Vision
Fast identification and statistical evaluation of segmental homologies in comparative maps. ISMB (Supplement of Bioinformatics) (2003)
Jun Huan, Jan F. Prins, Wei Wang, Todd J. Vision
Reconstruction of Ancestral Gene Order after Segmental Duplication and Gene Loss. CSB (2003)
Daniel G. Brown, Todd J. Vision, Steven D. Tanksley
Selective mapping: a discrete optimization approach to selecting a population subset for use in a high-density genetic mapping project. SODA (2000)