CSB

Keyphrases

Publications

2005

Preface. CSB (2005)
Jinbo Xu, Feng Jiao, Bonnie Berger
A Tree-Decomposition Approach to Protein Structure Prediction. CSB (2005)
Tu Minh Phuong, Zhen Lin, Russ B. Altman
Choosing SNPs Using Feature Selection. CSB (2005)
Pengjun Pei, Aidong Zhang
A Topological Measurement for Weighted Protein Interaction Network. CSB (2005)
Aswath Manohar, Serafim Batzoglou
TreeRefiner: A Tool for Refining a Multiple Alignment on a Phylogenetic Tree. CSB (2005)
Controlling Complexity. CSB (2005)
Dekel Tsur, Stephen Tanner, Ebrahim Zandi, Vineet Bafna, Pavel A. Pevzner
Identification of Post-Translational Modifications via Blind Search of Mass-Spectra. CSB (2005)
R. Nigam, S. Liang
A Pivoting Algorithm for Metabolic Networks in the Presence of Thermodynamic Constraints. CSB (2005)
Zhong Chen, Ying Xu
Multi-Scale Hierarchical Structure Prediction of Helical Transmembrane Proteins. CSB (2005)
Changyu Shen, Lang Li, Jake Yue Chen
Discover True Association Rates in Multi-protein Complex Proteomics Data Sets. CSB (2005)
Yuji Kawada, Yasubumi Sakakibara
Discriminative Discovery of Transcription Factor Binding Sites from Location Data. CSB (2005)
Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen Nuckolls, Daniel P. Miranker
On Optimizing Distance-Based Similarity Search for Biological Databases. CSB (2005)
Zheng Yun, Kwoh Chee Keong
Identifying Simple Discriminatory Gene Vectors with an Information Theory Approach. CSB (2005)
Roded Sharan, Bjarni V. Halldórsson, Sorin Istrail
Islands of Tractability for Parsimony Haplotyping. CSB (2005)
Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi
Estimating Time-Dependent Gene Networks from Time Series Microarray Data by Dynamic Linear Models with Markov Switching. CSB (2005)
Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos
Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data. CSB (2005)
Referees. CSB (2005)
BioSPICE and Use Cases. CSB (2005)
Russ B. Altman
Challenges in Creating an Infrastructure for Physics-Based Simulation of Biological Structures. CSB (2005)
Gabriela Alexe, Gyan Bhanot, Babu Venkataraghavan, Ramakrishna Ramaswamy, Jorge Lepre, Arnold J. Levine, Gustavo Stolovitzky
A Robust Meta-classification Strategy for Cancer Diagnosis from Gene Expression Data. CSB (2005)
BioImage Data Mining and Informatics. CSB (2005)
Anantharaman Kalyanaraman, Srinivas Aluru
Efficient Algorithms and Software for Detection of Full-Length LTR Retrotransposons. CSB (2005)
Tarek S. Najdi, Chin-Rang Yang, Bruce E. Shapiro, G. Wesley Hatfield, Eric Mjolsness
Application of a Generalized MWC Model for the Mathematical Simulation of Metabolic Pathways Regulated by Allosteric Enzymes. CSB (2005)
Will Sheffler, Eli Upfal, John Sedivy, William Stafford Noble
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays. CSB (2005)
Benjamin G. Jackson, Srinivas Aluru, Patrick S. Schnable
Consensus Genetic Maps: A Graph Theoretic Approach. CSB (2005)
Haifeng Li, Keshu Zhang, Tao Jiang
Robust and Accurate Cancer Classification with Gene Expression Profiling. CSB (2005)
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fangfang Pan, Liming Cai
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes. CSB (2005)
Arthur W. Toga
The Center for Computational Biology. CSB (2005)
Committees. CSB (2005)
Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu
Accurate Prediction of Orthologous Gene Groups in Microbes. CSB (2005)
Aaron A. Klammer, Christine C. Wu, Michael J. MacCoss, William Stafford Noble
Peptide Charge State Determination for Low-Resolution Tandem Mass Spectra. CSB (2005)
Vered Kunik, Zach Solan, Shimon Edelman, Eytan Ruppin, David Horn
Motif Extraction and Protein Classification. CSB (2005)
Tobias P. Mann, Richard Humbert, John A. Stamatoyannopoulos, William Stafford Noble
Automated Validation of Polymerase Chain Reactions Using Amplicon Melting Curves. CSB (2005)
Sun Kim, Jeong-Hyeon Choi, Jiong Yang
Gene Teams with Relaxed Proximity Constraint. CSB (2005)
Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005 CSB (2005)
Ron Kikinis
The National Alliance for Medical Imaging Computing (NA-MIC). CSB (2005)
Nalini Polavarapu, Shamkant B. Navathe, Ramprasad Ramnarayanan, Abrar ul Haque, Saurav Sahay, Ying Liu
Investigation into Biomedical Literature Classification Using Support Vector Machines. CSB (2005)
Ravi Vijaya Satya, Amar Mukherjee
An Efficient Algorithm for Perfect Phylogeny Haplotyping. CSB (2005)
Feng Gao, Mohammed Javeed Zaki
PSIST: Indexing Protein Structures Using Suffix Trees. CSB (2005)
Anya Tsalenko, Roded Sharan, Hege Edvardsen, Vessela N. Kristensen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini
Analysis of SNP-Expression Association Matrices. CSB (2005)
Luay Nakhleh, Guohua Jin, Fengmei Zhao, John M. Mellor-Crummey
Reconstructing Phylogenetic Networks Using Maximum Parsimony. CSB (2005)
Lincong Wang, Bruce Randall Donald
An Efficient and Accurate Algorithm for Assigning Nuclear Overhauser Effect Restraints Using a Rotamer Library Ensemble and Residual Dipolar Couplings. CSB (2005)
Chengyong Yang, Erliang Zeng, Tao Li, Giri Narasimhan
Clustering Genes Using Gene Expression and Text Literature Data. CSB (2005)
Susan L. Havre, Bobbie-Jo M. Webb-Robertson, Anuj R. Shah, Christian Posse, Banu Gopalan, Fred J. Brockman
Bioinformatic Insights from Metagenomics through Visualization. CSB (2005)
Xutao Deng, Huimin Geng, Hesham H. Ali
Learning Yeast Gene Functions from Heterogeneous Sources of Data Using Hybrid Weighted Bayesian Networks. CSB (2005)
Peter M. Kasson, Mark M. Davis, Axel T. Brünger
Deformable Modeling for Improved Calculation of Molecular Velocities from Single-Particle Tracking. CSB (2005)
Mohammed I. Rafiq, Martin J. O'Connor, Amar K. Das
Computational Method for Temporal Pattern Discovery in Biomedical Genomic Databases. CSB (2005)
Lincong Wang, Ramgopal R. Mettu, Bruce Randall Donald
An Algebraic Geometry Approach to Protein Structure Determination from NMR Data. CSB (2005)
Michael Ashburner
Ontologies for Biologists - A Community Model for the Annotation of Genomic Data. CSB (2005)

2004

Karuturi R. Krishna Murthy, Liu Jian Hua
Improved Fourier Transform Method for Unsupervised Cell-Cycle Regulated Gene Prediction. CSB (2004)