Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data.
Bart H. J. van den BergChamali ThanthiriwattePrashanti MandaSusan M. BridgesPublished in: BMC Bioinform. (2009)
Keyphrases
- microarray data
- microarray
- gene function
- gene ontology
- gene expression
- biological information
- gene expression data
- gene selection
- saccharomyces cerevisiae
- gene clusters
- microarray technology
- gene networks
- meta analysis
- gene expression patterns
- relevant genes
- microarray gene expression data
- biologically meaningful
- dna microarray data
- gene expression profiles
- high throughput
- biologically significant
- cancer classification
- differentially expressed genes
- feature selection
- data sets
- gene sets
- informative genes
- microarray data analysis
- biologically relevant
- microarray datasets
- microarray analysis
- biological data
- gene expression analysis
- dna microarray
- molecular biology
- regulatory networks
- gene regulatory networks
- high dimensional
- small number of samples
- analysis of gene expression
- gene expression data sets
- experimental conditions
- nearest neighbor
- machine learning
- genomic data
- biological processes
- semantic similarity
- high dimensionality
- cluster analysis