Fiona M. McCarthy

Publication Activity (10 Years)

Years Active: 2007-2019
Publications (10 Years): 2

Top Topics

Rules Discovered

Biomedical Ontologies

Top Venues

Database J. Biol. Databases Curation

J. Biomed. Informatics

Publications

Fiona M. McCarthy, Ken Pendarvis, Amanda M. Cooksey, Cathy R. Gresham, Matt Bomhoff, Sean Davey, Eric Lyons, Tad S. Sonstegard, Susan M. Bridges, Shane C. Burgess
Chickspress: a resource for chicken gene expression. Database J. Biol. Databases Curation 2019 (2019)
Mais G. Ammari, Cathy R. Gresham, Fiona M. McCarthy, Bindu Nanduri
HPIDB 2.0: a curated database for host-pathogen interactions. Database J. Biol. Databases Curation 2016 (2016)
Prashanti Manda, Fiona M. McCarthy, Bindu Nanduri, Susan M. Bridges
Information Theoretic Interestingness Measures for Cross-Ontology Data Mining in the Mouse Anatomy Ontology and the Gene Ontology. CoRR (2015)
Prashanti Manda, Fiona M. McCarthy, Susan M. Bridges
Interestingness measures and strategies for mining multi-ontology multi-level association rules from gene ontology annotations for the discovery of new GO relationships. J. Biomed. Informatics 46 (5) (2013)
Lakshmi R. Pillai, Philippe Chouvarine, Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker, Fiona M. McCarthy
Developing a biocuration workflow for AgBase, a non-model organism database. Database J. Biol. Databases Curation 2012 (2012)
Fiona M. McCarthy, Cathy R. Gresham, Teresia J. Buza, Philippe Chouvarine, Lakshmi R. Pillai, Ranjit Kumar, Seval Ozkan, Hui Wang, Prashanti Manda, Tony Arick, Susan M. Bridges, Shane C. Burgess
AgBase: supporting functional modeling in agricultural organisms. Nucleic Acids Res. 39 (Database-Issue) (2011)
William S. Sanders, Nan Wang, Susan M. Bridges, Brandon M. Malone, Yoginder S. Dandass, Fiona M. McCarthy, Bindu Nanduri, Mark L. Lawrence, Shane C. Burgess
The Proteogenomic Mapping Tool. BMC Bioinform. 12 (2011)
Mais G. Ammari, Fiona M. McCarthy, Bindu Nanduri, Lesya M. Pinchuk
Analysis of Bovine Viral Diarrhea Viruses-infected monocytes: identification of cytopathic and non-cytopathic biotype differences. BMC Bioinform. 11 (S-6) (2010)
Prashanti Manda, McKinley G. Freeman, Susan M. Bridges, T. J. Jankun-Kelly, Bindu Nanduri, Fiona M. McCarthy, Shane C. Burgess
GOModeler- A tool for hypothesis-testing of functional genomics datasets. BMC Bioinform. 11 (S-6) (2010)
Teresia J. Buza, Ranjit Kumar, Cathy R. Gresham, Shane C. Burgess, Fiona M. McCarthy
Facilitating functional annotation of chicken microarray data. BMC Bioinform. 10 (S-11) (2009)
Lauren A. Bright, Shane C. Burgess, Bhanu Chowdhary, Cyprianna E. Swiderski, Fiona M. McCarthy
Structural and functional-annotation of an equine whole genome oligoarray. BMC Bioinform. 10 (S-11) (2009)
Bart H. J. van den Berg, Jay H. Konieczka, Fiona M. McCarthy, Shane C. Burgess
: automated structural re-annotation pipeline for DNA microarrays. BMC Bioinform. 10 (2009)
William S. Sanders, Susan M. Bridges, Fiona M. McCarthy, Bindu Nanduri, Shane C. Burgess
Prediction of peptides observable by mass spectrometry applied at the experimental set level. BMC Bioinform. 8 (S-7) (2007)
Fiona M. McCarthy, Susan M. Bridges, Nan Wang, G. Bryce Magee, W. Paul Williams, Dawn S. Luthe, Shane C. Burgess
AgBase: a unified resource for functional analysis in agriculture. Nucleic Acids Res. 35 (Database-Issue) (2007)