Carl J. Schmidt

Publication Activity (10 Years)

Years Active: 2001-2018
Publications (10 Years): 4

Top Topics

Biological Pathways

Visualization Tool

Top Venues

Database J. Biol. Databases Curation

J. Biomed. Semant.

Publications

Modupeore O. Adetunji, Susan J. Lamont, Carl J. Schmidt
TransAtlasDB: an integrated database connecting expression data, metadata and variants. Database J. Biol. Databases Curation 2018 (2018)
Keqin Wu, Liang Sun, Carl J. Schmidt, Jian Chen
Graph query algebra and visual proximity rules for biological pathway exploration. Inf. Vis. 16 (3) (2017)
Liang Sun, Yongnan Zhu, A. S. M. Ashique Mahmood, Catalina O. Tudor, Jia Ren, K. Vijay-Shanker, Jian Chen, Carl J. Schmidt
WebGIVI: a web-based gene enrichment analysis and visualization tool. BMC Bioinform. 18 (1) (2017)
Samir Gupta, Karen E. Ross, Catalina O. Tudor, Cathy H. Wu, Carl J. Schmidt, K. Vijay-Shanker
miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases. J. Biomed. Semant. 7 (2016)
Yongnan Zhu, Liang Sun, Alexander Garbarino, Carl J. Schmidt, Jinglong Fang, Jian Chen
PathRings: a web-based tool for exploration of ortholog and expression data in biological pathways. BMC Bioinform. 16 (2015)
Lakshmi R. Pillai, Philippe Chouvarine, Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker, Fiona M. McCarthy
Developing a biocuration workflow for AgBase, a non-model organism database. Database J. Biol. Databases Curation 2012 (2012)
Keith Decker, Preeti Anday, Liang Sun, Carl J. Schmidt
Using expression data to help pathway curation. BIBM Workshops (2012)
Carl J. Schmidt, Liang Sun, Cecilia N. Arighi, Keith Decker, K. Vijay-Shanker, Manabu Torii, Catalina O. Tudor, Cathy H. Wu, Peter D'Eustachio
Pathway curation: Application of text-mining tools eGIFT and RLIMS-P. BIBM Workshops (2012)
Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker
eGIFT: Mining Gene Information from the Literature. BMC Bioinform. 11 (2010)
Li Jin, Keith S. Decker, Carl J. Schmidt
BioPlanner: A Plan Adaptation Approach for the Discovery of Biological Pathways across Species. IAAI (2009)
Catalina O. Tudor, K. Vijay-Shanker, Carl J. Schmidt
Mining the Biomedical Literature for Genic Information. BioNLP (2008)
Carl J. Schmidt, Michael Romanov, Oliver Ryder, Vincent J. Magrini, Matthew T. Hickenbotham, Jarret Glasscock, Sean McGrath, Elaine R. Mardis, Lincoln D. Stein
GBrowse: a unified genomic database for the chicken. Nucleic Acids Res. 36 (Database-Issue) (2008)
Salim Khan, William Gillis, Carl J. Schmidt, Keith Decker
A Multi-Agent System-driven AI Planning Approach to Biological Pathway Discovery. ICAPS (2003)
Salim Khan, Gang Situ, Keith Decker, Carl J. Schmidt
GoFigure: Automated Gene OntologyTM annotation. Bioinform. 19 (18) (2003)
Salim Khan, Ravi Makkena, Foster McGeary, Keith S. Decker, William Gillis, Carl J. Schmidt
A multi-agent system for the quantitative simulation of biological networks. AAMAS (2003)
Keith Decker, Salim Khan, Carl J. Schmidt, Gang Situ, Ravi Makkena, Dennis Michaud
BioMAS: A Multi-Agent System for Genomic Annotation. Int. J. Cooperative Inf. Syst. 11 (3) (2002)
Keith Decker, Salim Khan, Carl J. Schmidt, Dennis Michaud
Extending a Multi-agent System for Genomic Annotation. CIA (2001)
Keith Decker, Xiaojing Zheng, Carl J. Schmidt
A multi-agent system for automated genomic annotation. Agents (2001)