Vladimir Brusic

Publication Activity (10 Years)

Years Active: 1996-2023
Publications (10 Years): 27

Top Topics

Machine Learning

Disease Progression

Top Venues

Publications

Wenshuo Wang, Xu Li, Xiuqin Qiu, Xiang Zhang, Jindong Zhao, Vladimir Brusic
A privacy preserving framework for federated learning in smart healthcare systems. Inf. Process. Manag. 60 (1) (2023)
Stuart McDonald, Dave Towey, Vladimir Brusic
Social Impact of Smart Environments: Software Engineering Perspectives and Challenges. COMPSAC (2022)
Shuyu Li, Sherif Welsen, Vladimir Brusic
Multi-AP and Test Point Accuracy of the Results in WiFi Indoor Localization. Sensors 22 (10) (2022)
Kun Shang, Stuart McDonald, Giampaolo Buticchi, Vladimir Brusic
The development of ethically informed standards for intelligent monitoring systems of electric machines. COMPSAC (2022)
Xiang Zhang, Matthew Pike, Nasser Mustafa, Vladimir Brusic
Ethically Informed Software Process for Smart Health Home. CBMS (2022)
Xin Lin, Minjie Lyu, Yihan Zhang, Derin B. Keskin, Lubomir T. Chitkushev, Guanglan Zhang, Vladimir Brusic
Correctness of Cell Labels in Public Single Cell Transcriptomics Datasets. BIBM (2021)
Shuyu Li, Sherif Welsen, Vladimir Brusic
Multi-Step Optimization of Indoor Localization Accuracy Using Commodity WiFi. PIMRC (2021)
Luning Yang, Yihan Zhang, Nenad Mitic, Derin B. Keskin, Guanglan Zhang, Lubomir T. Chitkushev, Richard Rankin, Vladimir Brusic
Applications of single cell profiles of PBMC: Improvements of cell type classification. BIBM (2021)
Minjie Lyu, Yihan Zhang, Luning Yang, Xin Lin, Yilin Li, Huan Jin, Anthony G. Bellotti, Nenad Mitic, Vladimir Brusic
PBMC Cell Classification from Single Cell mRNA Expression by Artificial Neural Networks, Profiles, Gene Markers, and Protein Markers. BIBM (2021)
Aleksandar Veljkovic, Mirjana Maljkovic, Nenad Mitic, Sasa N. Malkov, Minjie Lyu, Xin Lin, Marek Michalewicz, Guanglan Zhang, Vladimir Brusic
Classification of Single Cell Types using Small Sets of Expressed Genes: Comparative Analysis of Supervised Machine Learning Methods. BIBM (2021)
Guanglan Zhang, Lou Chitkushev, Lars Rønn Olsen, Derin B. Keskin, Vladimir Brusic
TANTIGEN 2.0: a knowledge base of tumor T cell antigens and epitopes. BMC Bioinform. (8) (2021)
Bangrui Zheng, Minjie Lyu, Sen Lin, Vladimir Brusic
Tissue of origin classification from single cell mRNA expression by Artificial Neural Networks. BIBM (2020)
Jiahui Zhong, Razin Abdulrauf Shaikh, Haoguo Wu, Xin Lin, Zhiwei Cao, Lou Chitkushev, Guanglan Zhang, Derin B. Keskin, Vladimir Brusic
Classification of PBMC cell types using scRNAseq, ANN, and incremental learning. BIBM (2020)
Luning Yang, Yihan Zhang, Nenad Mitic, Derin B. Keskin, Guanglan Zhang, Lou Chitkushev, Vladimir Brusic
Prediction of PBMC Cell Types Using scRNAseq Reference Profiles. BIBM (2020)
Xin Lin, Jiahui Zhong, Minjie Lyu, Sen Lin, Derin B. Keskin, Guanglan Zhang, Vladimir Brusic, Lou Chitkushev
Artificial Neural Network System for Cell Classification using Single Cell RNA Expression. BIBM (2020)
Yihan Zhang, Luning Yang, Vladimir Brusic
Automation of Gene Expression Profile Analysis in Single Cell Data. BIBM (2020)
Kun Shang, Michael Galea, Vladimir Brusic, Serhiy Korposh, Yaping Zhang
Polyimide-Coated Fibre Bragg Grating (FBG) Sensors for Thermal Mapping of Electric Machine Windings. ICTON (2020)
Luning Yang, Yihan Zhang, Nenad Mitic, Derin B. Keskin, Guanglan Zhang, Lou Chitkushev, Vladimir Brusic
Single-cell mRNA Profiles in PBMC. BIBM (2020)
Minjie Lyu, Milena Radenkovic, Derin B. Keskin, Vladimir Brusic
Classification of Single Cell Types During Leukemia Therapy using Artificial Neural Networks. BIBM (2020)
Guanglan Zhang, Lou Chitkushev, Derin B. Keskin, Vladimir Brusic
TANTIGEN 2.0: an online database and analysis platform for tumor T cell antigens. BIBM (2019)
Matthew Pike, Nasser Mustafa, Dave Towey, Vladimir Brusic
Sensor Networks and Data Management in Healthcare: Emerging Technologies and New Challenges. COMPSAC (1) (2019)
Razin Abdulrauf Shaikh, Jiahui Zhong, Minjie Lyu, Sen Lin, Derin B. Keskin, Guanglan Zhang, Lou Chitkushev, Vladimir Brusic
Classification of Five Cell Types from PBMC Samples using Single Cell Transcriptomics and Artificial Neural Networks. BIBM (2019)
Ping Zhang, Constantinos A. Georgiou, Vladimir Brusic
Elemental metabolomics. Briefings Bioinform. 19 (3) (2018)
Jingjie Xu, Razin Abdulrauf Shaikh, Vladimir Brusic
Single Cell Transcriptomics Reveals Summary Patterns Specific for PBMCs and Other Cell Types. BIBM (2018)
Guanglan Zhang, Derin B. Keskin, James A. DeCaprio, Catherine J. Wu, Lou Chitkushev, Vladimir Brusic
MCVdb: A database for knowledge discovery in Merkel cell polyomavirus with applications in T cell immunology and vaccinology. BIBM (2017)
Jon B. Long, Yingyuan Zhang, Vladimir Brusic, Lou Chitkushev, Guanglan Zhang
Antidote Application: An Educational System for Treatment of Common Toxin Overdose. BCB (2017)
Luke Vandewater, Vladimir Brusic, William J. Wilson, Lance S. Macaulay, Ping Zhang
An adaptive genetic algorithm for selection of blood-based biomarkers for prediction of Alzheimer's disease progression. BMC Bioinform. 16 (S18) (2015)
Jon Long, Yingyuan Zhang, Lubomir T. Chitkushev, Vladimir Brusic, Guanglan Zhang
Antidote application: an educational system for treatment of common toxin overdose. BCB (2014)
Guanglan Zhang, Angelika Riemer, Derin B. Keskin, Lou Chitkushev, Ellis L. Reinherz, Vladimir Brusic
HPVdb: a data mining system for knowledge discovery in human papillomavirus with applications in T cell immunology and vaccinology. Database J. Biol. Databases Curation 2014 (2014)
Jing Sun, Guanglan Zhang, Lars Rønn Olsen, Ellis L. Reinherz, Vladimir Brusic
Landscape of neutralizing assessment of monoclonal antibodies against dengue virus. BCB (2013)
Yongqun He, Zhiwei Cao, Anne S. De Groot, Vladimir Brusic, Christian Schönbach, Nikolai Petrovsky
Computational vaccinology and the ICoVax 2012 workshop. BMC Bioinform. 14 (S-4) (2013)
Ping Zhang, Lou Chitkushev, Vladimir Brusic, Guanglan Zhang
Biomarkers in Immunology: from Concepts to Applications. BCB (2013)
Guanglan Zhang, Angelika Riemer, Derin B. Keskin, Lou Chitkushev, Ellis L. Reinherz, Vladimir Brusic
HPVdb: a Data Mining System for Knowledge Discovery in Human Papillomavirus with Applications in T cell Immunology and Vaccinology. BCB (2013)
Francesco Pappalardo, Vladimir Brusic, Holger Fröhlich
Immune System Modeling and Related Pathologies. Comput. Math. Methods Medicine 2012 (2012)
Christian Schönbach, Sissades Tongsima, Jonathan H. Chan, Vladimir Brusic, Tin Wee Tan, Shoba Ranganathan
InCoB2012 Conference: from biological data to knowledge to technological breakthroughs. BMC Bioinform. 13 (S-17) (2012)
Guanglan Zhang, Melisa L. Budde, Jennifer J. Lhost, David H. O'Connor, William H. Hildebrand, Vladimir Brusic
: a system for prediction of peptide binding to several MHC class I molecules in cynomolgus macaques. BCB (2011)
David S. DeLuca, Derin B. Keskin, Guang Zhang, Ellis L. Reinherz, Vladimir Brusic
PB1-F2 Finder: scanning influenza sequences for PB1-F2 encoding RNA segments. BMC Bioinform. 12 (S-13) (2011)
Guanglan Zhang, Ellis L. Reinherz, Derin B. Keskin, Vladimir Brusic
A cDNA microarray for rapid and economical identification of HLA profiles of individuals. BIBM Workshops (2011)
Suresh Kalathur, Vladimir Brusic, Guanglan Zhang, Lubomir T. Chitkushev, Tanya Zlateva
Visualization tools for presenting and analysis of global landscapes of vaccine targets. BIBM Workshops (2011)
Esma Dilek, Tanya Zlateva, Guanglan Zhang, Lubomir T. Chitkushev, Jae Young Lee, Vladimir Brusic
Probe design optimization of HLA microarray: Data cleaning of probe signals from cDNA tiling microarray: Outlier detection, noise reduction, and identification of uninformative probes in HLA typing application. BIBM Workshops (2011)
Liwen You, Vladimir Brusic, Marcus Gallagher, Mikael Bodén
Using Gaussian Process with Test Rejection to Detect T-Cell Epitopes in Pathogen Genomes. IEEE ACM Trans. Comput. Biol. Bioinform. 7 (4) (2010)
Francesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pierluigi Lollini, Kaye E. Basford, Vladimir Brusic
ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. Briefings Bioinform. 10 (3) (2009)
Francesco Pappalardo, Mark D. Halling-Brown, Marzio Pennisi, Ferdinando Chiacchio, Clare Sansom, Adrian J. Shepherd, David S. Moss, Santo Motta, Vladimir Brusic
The ImmunoGrid Simulator: How to Use It. CIBB (2009)
Olivo Miotto, Tin Wee Tan, Vladimir Brusic
Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses. BMC Bioinform. 9 (S-1) (2008)
Olivo Miotto, A. T. Heiny, Tin Wee Tan, J. Thomas August, Vladimir Brusic
Identification of human-to-human transmissibility factors in PB2 proteins of influenza A by large-scale mutual information analysis. BMC Bioinform. 9 (S-1) (2008)
Vladimir Brusic, Shoba Ranganathan
Critical technologies for bioinformatics. Briefings Bioinform. 9 (4) (2008)
Honghuang Lin, Guanglan Zhang, Songsak Tongchusak, Ellis L. Reinherz, Vladimir Brusic
Evaluation of MHC-II peptide binding prediction servers: applications for vaccine research. BMC Bioinform. 9 (S-12) (2008)
Guanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, A. T. Heiny, Kenneth X. Lee, Chee Keong Kwoh, J. Thomas August, Vladimir Brusic
Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen proteomes. BMC Bioinform. 9 (S-1) (2008)
Ping Zhang, Vladimir Brusic, Kaye E. Basford
A Hybrid Model for Prediction of Peptide Binding to MHC Molecules. ICONIP (1) (2008)
Liwen You, Ping Zhang, Mikael Bodén, Vladimir Brusic
Understanding Prediction Systems for HLA-Binding Peptides and T-Cell Epitope Identification. PRIB (2007)
Vladimir Brusic
The growth of bioinformatics. Briefings Bioinform. 8 (2) (2007)
Menaka Rajapakse, Bertil Schmidt, Lin Feng, Vladimir Brusic
Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms. BMC Bioinform. 8 (2007)
Joo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan
Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides. Bioinform. 22 (10) (2006)
Seng Hong Seah, Chee Keong Kwoh, Vladimir Brusic, Meena Kishore Sakharkar, Geok See Ng
Functional Prediction of Snake Neurotoxins. ICARCV (2006)
Asif M. Khan, A. T. Heiny, Kenneth X. Lee, Kellathur N. Srinivasan, Tin Wee Tan, J. Thomas August, Vladimir Brusic
Large-scale analysis of antigenic diversity of T-cell epitopes in dengue virus. BMC Bioinform. 7 (S-5) (2006)
Kai-Tak Lam, Judice L. Y. Koh, Bharadwaj Veeravalli, Vladimir Brusic
Incremental Maintenance of Biological Databases Using Association Rule Mining. PRIB (2006)
Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Guanglan Zhang, Vladimir Brusic
Extreme Learning Machine for Predicting HLA-Peptide Binding. ISNN (2) (2006)
Menaka Rajapakse, Bertil Schmidt, Vladimir Brusic
Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs. EvoWorkshops (2006)
Ivana Bozic, Guanglan Zhang, Vladimir Brusic
Predictive Vaccinology: Optimisation of Predictions Using Support Vector Machine Classifiers. IDEAL (2005)
Guanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic
Neural Models for Predicting Viral Vaccine Targets. J. Bioinform. Comput. Biol. 3 (5) (2005)
Guanglan Zhang, Kellathur N. Srinivasan, Anitha Veeramani, J. Thomas August, Vladimir Brusic
molecules, a haplotype of the BALB/c mouse. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Guanglan Zhang, Asif M. Khan, Kellathur N. Srinivasan, J. Thomas August, Vladimir Brusic
MULTIPRED: a computational system for prediction of promiscuous HLA binding peptides. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Olivo Miotto, Tin Wee Tan, Vladimir Brusic
Extraction by Example: Induction of Structural Rules for the Analysis of Molecular Sequence Data from Heterogeneous Sources. IDEAL (2005)
Menaka Rajapakse, Lonce L. Wyse, Bertil Schmidt, Vladimir Brusic
Deriving Matrix of Peptide-MHC Interactions in Diabetic Mouse by Genetic Algorithm. IDEAL (2005)
Johann Lenffer, Paulo Lai, Wafaa El Mejaber, Asif M. Khan, Judice L. Y. Koh, Paul T. J. Tan, Seng Hong Seah, Vladimir Brusic
CysView: protein classification based on cysteine pairing patterns. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Joyce Phui Yee Siew, Asif M. Khan, Paul T. J. Tan, Judice L. Y. Koh, Seng Hong Seah, Chuay Yeng Koo, Siaw Ching Chai, Arunmozhiarasi Armugam, Vladimir Brusic, Kandiah Jeyaseelan
Systematic analysis of snake neurotoxins' functional classification using a data warehousing approach. Bioinform. 20 (18) (2004)
Manisha Brahmachary, S. P. T. Krishnan, Judice L. Y. Koh, Asif M. Khan, Seng Hong Seah, Tin Wee Tan, Vladimir Brusic, Vladimir B. Bajic
ANTIMIC: a database of antimicrobial sequences. Nucleic Acids Res. 32 (Database-Issue) (2004)
Kellathur N. Srinivasan, Guanglan Zhang, Asif M. Khan, J. Thomas August, Vladimir Brusic
Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens. ISMB/ECCB (Supplement of Bioinformatics) (2004)
Nikolai Petrovsky, Christian Schönbach, Vladimir Brusic
Bioinformatic strategies for better understanding of immune function. Silico Biol. 3 (4) (2003)
Vladimir Brusic
From Immunoinformatics to Immunomics. J. Bioinform. Comput. Biol. 1 (1) (2003)
Paul T. J. Tan, Asif M. Khan, Vladimir Brusic
Bioinformatics for Venom and Toxin Sciences. Briefings Bioinform. 4 (1) (2003)
Vladimir B. Bajic, Vladimir Brusic, Jinyan Li, See-Kiong Ng, Limsoon Wong
From Informatics to Bioinformatics. APBC (2003)
Christian Schönbach, Judice L. Y. Koh, Darren R. Flower, Limsoon Wong, Vladimir Brusic
FIMM, a database of functional molecular immunology: update 2002. Nucleic Acids Res. 30 (1) (2002)
Vladimir B. Bajic, Suisheng Tang, Hao Han, Vladimir Brusic, Artemis G. Hatzigeorgiou
Artificial Neural Networks Based Systems for Recognition of Genomic Signals and Regions: A Review. Informatica (Slovenia) 26 (4) (2002)
Vladimir B. Bajic, Allen Chong, Seng Hong Seah, Vladimir Brusic
An Intelligent System for Vertebrate Promoter Recognition. IEEE Intell. Syst. 17 (4) (2002)
Vladimir B. Bajic, Seng Hong Seah, Allen Chong, Guanglan Zhang, Judice L. Y. Koh, Vladimir Brusic
Dragon Promoter Finder: recognition of vertebrate RNA polymerase II promoters. Bioinform. 18 (1) (2002)
Christian Schönbach, Judice L. Y. Koh, Xin Sheng, Limsoon Wong, Vladimir Brusic
FIMM, a database of functional molecular immunology. Nucleic Acids Res. 28 (1) (2000)
Christian Schönbach, Peter Kowalski-Saunders, Vladimir Brusic
Data Warehousing in Molecular Biology. Briefings Bioinform. 1 (1) (2000)
Vladimir Brusic, John Zeleznikow
Knowledge discovery and data mining in biological databases. Knowl. Eng. Rev. 14 (3) (1999)
Vladimir Brusic, John Zeleznikow
Artificial neural network applications in immunology. IJCNN (1999)
Vladimir Brusic, George B. Rudy, Leonard C. Harrison
MHCPEP, a database of MHC-binding peptides: update 1997. Nucleic Acids Res. 26 (1) (1998)
Lawrence S. Hon, Neil F. Abernethy, Vladimir Brusic, Jenny Chai, Russ B. Altman
MHCWeb: converting a WWW database into a knowledge-based collaborative environment. AMIA (1998)
Vladimir Brusic, George B. Rudy, G. Honeyman, Jürgen Hammer, Leonard C. Harrison
Prediction of MHC class II-binding peptides using an evolutionary algorithm and artificial neural network. Bioinform. 14 (2) (1998)
Vladimir Brusic, Peter van Endert, John Zeleznikow, Soizic Daniel, Jürgen Hammer, Nikolai Petrovsky
A neural network model approach to the study of human TAP transporter. Silico Biol. 1 (2) (1998)
Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison
MHCPEP, a database of MHC-binding peptides: update 1996. Nucleic Acids Res. 25 (1) (1997)
Vladimir Brusic, Christian Schönbach, Masafumi Takiguchi, Victor Ciesielski, Leonard C. Harrison
Application of Genetic Search in Derivation of Matrix Models of Peptide Binding to MHC Molecules. ISMB (1997)
Vladimir Brusic, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison
MHCPEP--a database of MHC-binding peptides: update 1995. Nucleic Acids Res. 24 (1) (1996)