Neil F. Abernethy

Publication Activity (10 Years)

Years Active: 1997-2019
Publications (10 Years): 5

Top Topics

Clinical Decision Support

Infectious Disease

Knowledge Resources

Top Venues

J. Biomed. Informatics

Publications

John E. Mittler, James T. Murphy, Sarah E. Stansfield, Kathryn Peebles, Geoffrey S. Gottlieb, Neil F. Abernethy, Molly C. Reid, Steven M. Goodreau, Joshua T. Herbeck
Large benefits to youth-focused HIV treatment-as-prevention efforts in generalized heterosexual populations: An agent-based simulation model. PLoS Comput. Biol. 15 (12) (2019)
Lucy Lu Wang, John H. Gennari, Neil F. Abernethy
Discovering representational differences between pathway knowledge bases for pathway resource merging. AMIA (2016)
Lucy Lu Wang, John H. Gennari, Neil F. Abernethy
An Analysis of Differences in Biological Pathway Resources. ICBO/BioCreative (2016)
Kate Zinszer, Anya Okhmatovskaia, Arash Shaban-Nejad, Lauren N. Carroll, Neil F. Abernethy, David L. Buckeridge
The SDIDS System for Integrating Global Health Surveillance Data: An Example Application to Malaria Surveillance in Uganda. AMIA (2015)
Casey Lynnette Overby, Emily Beth Devine, Neil F. Abernethy, Jeannine S. McCune, Peter Tarczy-Hornoch
Making pharmacogenomic-based prescribing alerts more effective: A scenario-based pilot study with physicians. J. Biomed. Informatics 55 (2015)
Lauren N. Carroll, Alan P. Au, Landon T. Detwiler, Tsung-chieh Fu, Ian S. Painter, Neil F. Abernethy
Visualization and analytics tools for infectious disease epidemiology: A systematic review. J. Biomed. Informatics 51 (2014)
Emily Beth Devine, Chia-Ju Lee, Casey Lynnette Overby, Neil F. Abernethy, Jeannine McCune, Joe W. Smith, Peter Tarczy-Hornoch
Usability evaluation of pharmacogenomics clinical decision support aids and clinical knowledge resources in a computerized provider order entry system: A mixed methods approach. Int. J. Medical Informatics 83 (7) (2014)
Deanna Petrochilos, Ali Shojaie, John H. Gennari, Neil F. Abernethy
Using random walks to identify cancer-associated modules in expression data. BioData Min. 6 (2013)
Daniel R. Masys, Gail P. Jarvik, Neil F. Abernethy, Nicholas R. Anderson, George J. Papanicolaou, Dina N. Paltoo, Mark A. Hoffman, Isaac S. Kohane, Howard P. Levy
Technical desiderata for the integration of genomic data into Electronic Health Records. J. Biomed. Informatics 45 (3) (2012)
Casey Lynnette Overby, Emily Beth Devine, Neil F. Abernethy, Jeannine McCune, Peter Tarczy-Hornoch
Assessing the effective communication of pharmacogenomics knowledge embedded in the electronic health record for drug therapy individualization. AMIA (2012)
Deanna Petrochilos, Neil F. Abernethy
Assessing network characteristics of cancer associated genes in metabolic and signaling networks. CIBCB (2012)
Rebecca A. Hills, Debra Revere, Rita Altamore, Neil F. Abernethy, William B. Lober
Timeliness and data element completeness of immunization data in Washington State in 2010: a comparison of data transfer methods. AMIA (2012)
Rebecca A. Hills, Blaine Reeder, Debra Revere, William B. Lober, Neil F. Abernethy
Immunization information and population data sources: the information needs of public health practitioners. IHI (2010)
Alicia F. Guidry, Judd L. Walson, Neil F. Abernethy
Linking information systems for HIV care and research in Kenya. IHI (2010)
Robin McEntire, Peter D. Karp, Neil F. Abernethy, David Benton, Gregg Helt, Matt DeJongh, Robert Kent, Anthony Kosky, Suzanna Lewis, Dan Hodnett, Eric P. Neumann, Frank Olken, Dhiraj K. Pathak, Peter Tarczy-Hornoch, Luca Toldo, Thodoros Topaloglou
An Evaluation of Ontology Exchange Languages for Bioinformatics. ISMB (2000)
Neil F. Abernethy, Julie J. Wu, Micheal Hewett, Russ B. Altman
Sophia: a flexible, Web-based knowledge server. IEEE Intell. Syst. 14 (4) (1999)
Russ B. Altman, Michael Bada, Xiaoqian J. Chai, Michelle Whirl Carrillo, Richard O. Chen, Neil F. Abernethy
RiboWeb: An Ontology-Based System for Collaborative Molecular Biology. IEEE Intell. Syst. 14 (5) (1999)
Neil F. Abernethy, Russ B. Altman
Sophia: Providing Basic Knowledge Services with a Common DBMS. KRDB (1998)
Lawrence S. Hon, Neil F. Abernethy, Vladimir Brusic, Jenny Chai, Russ B. Altman
MHCWeb: converting a WWW database into a knowledge-based collaborative environment. AMIA (1998)
Russ B. Altman, Neil F. Abernethy, Richard O. Chen
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data. ISMB (1997)