Peter D. Karp

ORCID

Publication Activity (10 Years)

Years Active: 1990-2022
Publications (10 Years): 23

Top Venues

Database J. Biol. Databases Curation

Nucleic Acids Res.

BMC Bioinform.

Briefings Bioinform.

Publications

Peter D. Karp
Reviewing knowledgebase and database grant proposals in the life sciences: the role of innovation. Database J. Biol. Databases Curation 2022 (2022) (2022)
Valérie de Crécy-Lagard, Rocio Amorin de Hegedus, Cecilia N. Arighi, Jill Babor, Alex Bateman, Ian Blaby, Crysten Blaby-Haas, Alan Bridge, Stephen K. Burley, Stacey Cleveland, Lucy J. Colwell, Ana Conesa, Christian Dallago, Antoine Danchin, Anita de Waard, Adam Deutschbauer, Raquel Dias, Yousong Ding, Gang Fang, Iddo Friedberg, John Gerlt, Joshua Goldford, Mark Gorelik, Benjamin M. Gyori, Christopher Henry, Geoffrey Hutinet, Marshall Jaroch, Peter D. Karp, Liudmyla Kondratova, Zhiyong Lu, Aron Marchler-Bauer, Maria Jesus Martin, Claire D. McWhite, Gaurav D. Moghe, Paul Monaghan, Anne Morgat, Christopher J. Mungall, Darren A. Natale, William C. Nelson, Seán I. O'Donoghue, Christine A. Orengo, Katherine H. O'Toole, Predrag Radivojac, Colbie Reed, Richard J. Roberts, Dmitri Rodionov, Irina A. Rodionova, Jeffrey DePons, Lana Saleh, Gloria M. Sheynkman, Françoise Thibaud-Nissen, Paul D. Thomas, Peter Uetz, David Vallenet, Erica Watson Carter, Peter Weigele, Valerie Wood, Elisha M. Wood-Charlson, Jin Xu
A roadmap for the functional annotation of protein families: a community perspective. Database J. Biol. Databases Curation 2022 (2022) (2022)
Peter D. Karp, Suzanne M. Paley, Markus Krummenacker, Anamika Kothari, Michael J. Wannemuehler, Gregory J. Phillips
Pathway Tools Management of Pathway/Genome Data for Microbial Communities. Frontiers Bioinform. 2 (2022)
Peter D. Karp, Peter E. Midford, Richard Billington, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Wai Kit Ong, Pallavi Subhraveti, Ron Caspi, Carol A. Fulcher, Ingrid M. Keseler, Suzanne M. Paley
Pathway Tools version 23.0 update: software for pathway/genome informatics and systems biology. Briefings Bioinform. 22 (1) (2021)
Suzanne M. Paley, Peter D. Karp
The BioCyc Metabolic Network Explorer. BMC Bioinform. 22 (1) (2021)
Wai Kit Ong, Peter E. Midford, Peter D. Karp
Taxonomic weighting improves the accuracy of a gap-filling algorithm for metabolic models. Bioinform. 36 (6) (2020)
Ron Caspi, Richard Billington, Ingrid M. Keseler, Anamika Kothari, Markus Krummenacker, Peter E. Midford, Wai Kit Ong, Suzanne M. Paley, Pallavi Subhraveti, Peter D. Karp
The MetaCyc database of metabolic pathways and enzymes - a 2019 update. Nucleic Acids Res. 48 (Database-Issue) (2020)
Suzanne M. Paley, Peter D. Karp
The MultiOmics Explainer: explaining omics results in the context of a pathway/genome database. BMC Bioinform. 20 (1) (2019)
Peter D. Karp, Richard Billington, Ron Caspi, Carol A. Fulcher, Mario Latendresse, Anamika Kothari, Ingrid M. Keseler, Markus Krummenacker, Peter E. Midford, Quang Ong, Wai Kit Ong, Suzanne M. Paley, Pallavi Subhraveti
The BioCyc collection of microbial genomes and metabolic pathways. Briefings Bioinform. 20 (4) (2019)
Peter D. Karp, Daniel S. Weaver, Mario Latendresse
How accurate is automated gap filling of metabolic models? BMC Syst. Biol. 12 (1) (2018)
Mario Latendresse, Peter D. Karp
Evaluation of reaction gap-filling accuracy by randomization. BMC Bioinform. 19 (1) (2018)
Bohdan B. Khomtchouk, Edmund Weitz, Peter D. Karp, Claes Wahlestedt
How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications. Briefings Bioinform. 19 (3) (2018)
Ron Caspi, Richard Billington, Carol A. Fulcher, Ingrid M. Keseler, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Peter E. Midford, Quang Ong, Wai Kit Ong, Suzanne M. Paley, Pallavi Subhraveti, Peter D. Karp
The MetaCyc database of metabolic pathways and enzymes. Nucleic Acids Res. 46 (Database-Issue) (2018)
Bohdan B. Khomtchouk, Edmund Weitz, Peter D. Karp, Claes Wahlestedt
How the strengths of Lisp-family languages facilitate building complex and flexible bioinformatics applications. Briefings Bioinform. 18 (5) (2017)
Ingrid M. Keseler, Amanda Mackie, Alberto Santos-Zavaleta, Richard Billington, César Bonavides-Martínez, Ron Caspi, Carol A. Fulcher, Socorro Gama-Castro, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Luis Muñiz-Rascado, Quang Ong, Suzanne M. Paley, Martín Peralta-Gil, Pallavi Subhraveti, David A. Velázquez-Ramírez, Daniel S. Weaver, Julio Collado-Vides, Ian T. Paulsen, Peter D. Karp
The EcoCyc database: reflecting new knowledge about Escherichia coli K-12. Nucleic Acids Res. 45 (Database-Issue) (2017)
Suzanne M. Paley, Peter D. Karp
Update notifications for the BioCyc collection of databases. Database J. Biol. Databases Curation 2017 (2017)
Ron Caspi, Richard Billington, Luciana Ferrer, Hartmut Foerster, Carol A. Fulcher, Ingrid M. Keseler, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Lukas A. Mueller, Quang Ong, Suzanne M. Paley, Pallavi Subhraveti, Daniel S. Weaver, Peter D. Karp
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 44 (Database-Issue) (2016)
Peter D. Karp, Mario Latendresse, Suzanne M. Paley, Markus Krummenacker, Quang Ong, Richard Billington, Anamika Kothari, Daniel S. Weaver, Thomas J. Lee, Pallavi Subhraveti, Aaron Spaulding, Carol A. Fulcher, Ingrid M. Keseler, Ron Caspi
Pathway Tools version 19.0 update: software for pathway/genome informatics and systems biology. Briefings Bioinform. 17 (5) (2016)
Suzanne M. Paley, Paul E. O'Maille, Daniel S. Weaver, Peter D. Karp
Pathway collages: personalized multi-pathway diagrams. BMC Bioinform. 17 (2016)
Suzanne M. Paley, Markus Krummenacker, Peter D. Karp
Representation and inference of cellular architecture for metabolic reconstruction and modeling. Bioinform. 32 (7) (2016)
Peter D. Karp
How much does curation cost? Database J. Biol. Databases Curation 2016 (2016)
Peter D. Karp
Crowd-sourcing and author submission as alternatives to professional curation. Database J. Biol. Databases Curation 2016 (2016)
Peter D. Karp
Crowd-sourcing and author submission as alternatives to professional curation Database J. Biol. Databases Curation 2016 (2016)
Peter D. Karp, Bonnie Berger, Diane E. Kovats, Thomas Lengauer, Michal Linial, Pardis Sabeti, Winston Hide, Burkhard Rost
Message from the ISCB: ISCB Ebola award for important future research on the computational biology of Ebola virus. Bioinform. 31 (4) (2015)
Peter D. Karp, Bonnie Berger, Diane E. Kovats, Thomas Lengauer, Michal Linial, Pardis Sabeti, Winston Hide, Burkhard Rost
ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus. PLoS Comput. Biol. 11 (1) (2015)
James C. Hu, Gavin Sherlock, Deborah A. Siegele, Suzanne A. Aleksander, Catherine A. Ball, Janos Demeter, Sushanth Gouni, Timothy A. Holland, Peter D. Karp, John E. Lewis, Nathan M. Liles, Brenley K. McIntosh, Huaiyu Mi, Anushya Muruganujan, Farrell Wymore, Paul D. Thomas
PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools. Nucleic Acids Res. 42 (Database-Issue) (2014)
Mario Latendresse, Markus Krummenacker, Peter D. Karp
Optimal metabolic route search based on atom mappings. Bioinform. 30 (14) (2014)
Ron Caspi, Tomer Altman, Richard Billington, Kate Dreher, Hartmut Foerster, Carol A. Fulcher, Timothy A. Holland, Ingrid M. Keseler, Anamika Kothari, Aya Kubo, Markus Krummenacker, Mario Latendresse, Lukas A. Mueller, Quang Ong, Suzanne M. Paley, Pallavi Subhraveti, Daniel S. Weaver, Deepika Weerasinghe, Peifen Zhang, Peter D. Karp
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res. 42 (Database-Issue) (2014)
Ingrid M. Keseler, Marek S. Skrzypek, Deepika Weerasinghe, Albert Y. Chen, Carol A. Fulcher, Gene-Wei Li, Kimberly C. Lemmer, Katherine M. Mladinich, Edmond D. Chow, Gavin Sherlock, Peter D. Karp
Curation accuracy of model organism databases. Database J. Biol. Databases Curation 2014 (2014)
Daniel S. Weaver, Ingrid M. Keseler, Amanda Mackie, Ian T. Paulsen, Peter D. Karp
A genome-scale metabolic flux model of Escherichia coli K-12 derived from the EcoCyc database. BMC Syst. Biol. 8 (2014)
Michael Travers, Suzanne M. Paley, Jeff Shrager, Timothy A. Holland, Peter D. Karp
Groups: knowledge spreadsheets for symbolic biocomputing. Database J. Biol. Databases Curation 2013 (2013)
Ingrid M. Keseler, Amanda Mackie, Martín Peralta-Gil, Alberto Santos-Zavaleta, Socorro Gama-Castro, César Bonavides-Martínez, Carol A. Fulcher, Araceli M. Huerta, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Luis Muñiz-Rascado, Quang Ong, Suzanne M. Paley, Imke Schröder, Alexander Glennon Shearer, Pallavi Subhraveti, Michael Travers, Deepika Weerasinghe, Verena Weiss, Julio Collado-Vides, Robert P. Gunsalus, Ian T. Paulsen, Peter D. Karp
EcoCyc: fusing model organism databases with systems biology. Nucleic Acids Res. 41 (Database-Issue) (2013)
Steven Eker, Markus Krummenacker, Alexander Glennon Shearer, Ashish Tiwari, Ingrid M. Keseler, Carolyn L. Talcott, Peter D. Karp
Computing minimal nutrient sets from metabolic networks via linear constraint solving. BMC Bioinform. 14 (2013)
Tomer Altman, Michael Travers, Anamika Kothari, Ron Caspi, Peter D. Karp
A systematic comparison of the MetaCyc and KEGG pathway databases. BMC Bioinform. 14 (2013)
Mario Latendresse, Markus Krummenacker, Miles Trupp, Peter D. Karp
Construction and completion of flux balance models from pathway databases. Bioinform. 28 (3) (2012)
Ron Caspi, Tomer Altman, Kate Dreher, Carol A. Fulcher, Pallavi Subhraveti, Ingrid M. Keseler, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Lukas A. Mueller, Quang Ong, Suzanne M. Paley, Anuradha Pujar, Alexander Glennon Shearer, Michael Travers, Deepika Weerasinghe, Peifen Zhang, Peter D. Karp
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 40 (Database-Issue) (2012)
Suzanne M. Paley, Mario Latendresse, Peter D. Karp
Regulatory network operations in the Pathway Tools software. BMC Bioinform. 13 (2012)
Mario Latendresse, Jeremiah P. Malerich, Mike Travers, Peter D. Karp
Accurate Atom-Mapping Computation for Biochemical Reactions. J. Chem. Inf. Model. 52 (11) (2012)
Mario Latendresse, Peter D. Karp
Web-Based Metabolic Network Visualization with a Zooming User Interface. BMC Bioinform. 12 (2011)
Peter D. Karp, Mario Latendresse, Suzanne M. Paley
Using cellular network diagrams to interpret large-scale datasets: past progress and future challenges. Human Vision and Electronic Imaging (2011)
Ingrid M. Keseler, Julio Collado-Vides, Alberto Santos-Zavaleta, Martín Peralta-Gil, Socorro Gama-Castro, Luis Muñiz-Rascado, César Bonavides-Martínez, Suzanne M. Paley, Markus Krummenacker, Tomer Altman, Pallavi Kaipa, Aaron Spaulding, John Pacheco, Mario Latendresse, Carol A. Fulcher, Malabika Sarker, Alexander Glennon Shearer, Amanda Mackie, Ian T. Paulsen, Robert P. Gunsalus, Peter D. Karp
biology. Nucleic Acids Res. 39 (Database-Issue) (2011)
Luciana Ferrer, Alexander Glennon Shearer, Peter D. Karp
Discovering novel subsystems using comparative genomics. Bioinform. 27 (18) (2011)
Luciana Ferrer, Joseph M. Dale, Peter D. Karp
A systematic study of genome context methods: calibration, normalization and combination. BMC Bioinform. 11 (2010)
Mario Latendresse, Peter D. Karp
An advanced web query interface for biological databases. Database J. Biol. Databases Curation 2010 (2010)
Peter D. Karp
Development of Large Scientific Knowledge Bases. ICAART (1) (2010)
Joseph M. Dale, Liviu Popescu, Peter D. Karp
Machine learning methods for metabolic pathway prediction. BMC Bioinform. 11 (2010)
Peter D. Karp
Databases and Algorithms for Pathway Bioinformatics. HEALTHINF (2010)
Ron Caspi, Tomer Altman, Joseph M. Dale, Kate Dreher, Carol A. Fulcher, Fred Gilham, Pallavi Kaipa, Athikkattuvalasu S. Karthikeyan, Anamika Kothari, Markus Krummenacker, Mario Latendresse, Lukas A. Mueller, Suzanne M. Paley, Liviu Popescu, Anuradha Pujar, Alexander Glennon Shearer, Peifen Zhang, Peter D. Karp
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res. 38 (Database-Issue) (2010)
Peter D. Karp, Suzanne M. Paley, Markus Krummenacker, Mario Latendresse, Joseph M. Dale, Thomas J. Lee, Pallavi Kaipa, Fred Gilham, Aaron Spaulding, Liviu Popescu, Tomer Altman, Ian T. Paulsen, Ingrid M. Keseler, Ron Caspi
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology. Briefings Bioinform. 11 (1) (2010)
Ingrid M. Keseler, César Bonavides-Martínez, Julio Collado-Vides, Socorro Gama-Castro, Robert P. Gunsalus, D. Aaron Johnson, Markus Krummenacker, Laura M. Nolan, Suzanne M. Paley, Ian T. Paulsen, Martín Peralta-Gil, Alberto D. Santos-Zavaleta, Alexander Glennon Shearer, Peter D. Karp
biology. Nucleic Acids Res. 37 (Database-Issue) (2009)
Ron Caspi, Hartmut Foerster, Carol A. Fulcher, Pallavi Kaipa, Markus Krummenacker, Mario Latendresse, Suzanne M. Paley, Seung Yon Rhee, Alexander Glennon Shearer, Christophe Tissier, Thomas C. Walk, Peifen Zhang, Peter D. Karp
The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Res. 36 (Database-Issue) (2008)
Peter D. Karp, Thomas J. Lee, Valerie Wagner
BioWarehouse: Relational Integration of Eleven Bioinformatics Databases and Formats. DILS (2008)
Thomas J. Lee, Ian T. Paulsen, Peter D. Karp
Annotation-based inference of transporter function. ISMB (2008)
Michelle L. Green, Peter D. Karp
Using genome-context data to identify specific types of functional associations in pathway/genome databases. ISMB/ECCB (Supplement of Bioinformatics) (2007)
Yannick Pouliot, Peter D. Karp
A survey of orphan enzyme activities. BMC Bioinform. 8 (2007)
Ron Caspi, Hartmut Foerster, Carol A. Fulcher, Rebecca Hopkinson, John Ingraham, Pallavi Kaipa, Markus Krummenacker, Suzanne M. Paley, John Pick, Seung Yon Rhee, Christophe Tissier, Peifen Zhang, Peter D. Karp
MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res. 34 (Database-Issue) (2006)
Heladia Salgado, Alberto Santos-Zavaleta, Socorro Gama-Castro, Martín Peralta-Gil, Mónica I. Peñaloza-Spínola, Agustino Martínez-Antonio, Peter D. Karp, Julio Collado-Vides
K-12. BMC Bioinform. 7 (2006)
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Priyanka Gupta, David W. J. Stringer-Calvert, Jessica D. Tenenbaum, Peter D. Karp
BioWarehouse: a bioinformatics database warehouse toolkit. BMC Bioinform. 7 (2006)
Markus Krummenacker, Suzanne M. Paley, Lukas A. Mueller, Thomas Yan, Peter D. Karp
Querying and computing with BioCyc databases. Bioinform. 21 (16) (2005)
Ingrid M. Keseler, Julio Collado-Vides, Socorro Gama-Castro, John Ingraham, Suzanne M. Paley, Ian T. Paulsen, Martín Peralta-Gil, Peter D. Karp
. Nucleic Acids Res. 33 (Database-Issue) (2005)
Cynthia J. Krieger, Peifen Zhang, Lukas A. Mueller, Alfred Wang, Suzanne M. Paley, Martha Arnaud, John Pick, Seung Yon Rhee, Peter D. Karp
MetaCyc: a multiorganism database of metabolic pathways and enzymes. Nucleic Acids Res. 32 (Database-Issue) (2004)
Peter D. Karp, Suzanne M. Paley, Cynthia J. Krieger, Peifen Zhang
An Evidence Ontology for Use in Pathway/Genome Databases. Pacific Symposium on Biocomputing (2004)
Pedro Romero, Peter D. Karp
Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases. Bioinform. 20 (5) (2004)
Michelle L. Green, Peter D. Karp
A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases. BMC Bioinform. 5 (2004)
Peter D. Karp
Pathway Bioinformatics. CSB (2003)
Iwei Yeh, Peter D. Karp, Natalya Fridman Noy, Russ B. Altman
Knowledge acquisition, consistency checking and concurrency control for Gene Ontology (GO). Bioinform. 19 (2) (2003)
Peter D. Karp, Eric P. Neumann, Alexander J. Hartemink, Pedro Romero
Genome, Pathway, and Interaction Bioinformatics - Session Introduction. Pacific Symposium on Biocomputing (2003)
Peter D. Karp
What Database Management System(s) Should Be Employed in Bioinformatics Applications? OMICS 7 (1) (2003)
Suzanne M. Paley, Peter D. Karp
Evaluation of computational metabolic-pathway predictions for Helicobacter pylori. Bioinform. 18 (5) (2002)
Peter D. Karp, Monica Riley, Milton H. Saier Jr., Ian T. Paulsen, Julio Collado-Vides, Suzanne M. Paley, Alida Pellegrini-Toole, César Bonavides-Martínez, Socorro Gama-Castro
The EcoCyc Database. Nucleic Acids Res. 30 (1) (2002)
Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole
The MetaCyc Database. Nucleic Acids Res. 30 (1) (2002)
Peter D. Karp, Pedro Romero, Eric P. Neumann
Genome, Pathway and Interaction Bioinformatics - Session Introduction. Pacific Symposium on Biocomputing (2002)
Peter D. Karp, Suzanne M. Paley, Pedro Romero
The Pathway Tools software. ISMB (2002)
Pedro Romero, Peter D. Karp
Nutrition-Related Analysis of Pathway/Genome Databases. Pacific Symposium on Biocomputing (2001)
Peter D. Karp, Eric P. Neumann, Pedro Romero
Genome, Pathway and Interaction Bioinformatics - Session Introduction. Pacific Symposium on Biocomputing (2001)
Peter D. Karp, Suzanne M. Paley, Jingchun Zhu
Database verification studies of SWISS-PROT and GenBank. Bioinform. 17 (6) (2001)
Peter D. Karp, Monica Riley, Milton H. Saier Jr., Ian T. Paulsen, Suzanne M. Paley, Alida Pellegrini-Toole
The EcoCyc and MetaCyc databases. Nucleic Acids Res. 28 (1) (2000)
Robin McEntire, Peter D. Karp, Neil F. Abernethy, David Benton, Gregg Helt, Matt DeJongh, Robert Kent, Anthony Kosky, Suzanna Lewis, Dan Hodnett, Eric P. Neumann, Frank Olken, Dhiraj K. Pathak, Peter Tarczy-Hornoch, Luca Toldo, Thodoros Topaloglou
An Evaluation of Ontology Exchange Languages for Bioinformatics. ISMB (2000)
Peter D. Karp
An ontology for biological function based on molecular interactions. Bioinform. 16 (3) (2000)
Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker
Eco Cyc: encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Res. 27 (1) (1999)
Peter D. Karp, Vinay K. Chaudhri, Suzanne M. Paley
A Collaborative Environment for Authoring Large Knowledge Bases. J. Intell. Inf. Syst. 13 (3) (1999)
Vinay K. Chaudhri, Adam Farquhar, Richard Fikes, Peter D. Karp, James Rice
OKBC: A Programmatic Foundation for Knowledge Base Interoperability. AAAI/IAAI (1998)
Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker
EcoCyc: Encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Res. 26 (1) (1998)
Marie desJardins, Peter D. Karp, Markus Krummenacker, Thomas J. Lee, Christos A. Ouzounis
Prediction of Enzyme Classification from Protein Sequence without the Use of Sequence Similarity. ISMB (1997)
Ronald G. Forsythe Jr., Peter D. Karp, Michael L. Mavrovouniotis
Estimation of equilibrium constants using automated group contribution methods. Comput. Appl. Biosci. 13 (5) (1997)
Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole, Markus Krummenacker
EcoCyc: Enyclopedia of Escherichia coli Genes and Metabolism. Nucleic Acids Res. 25 (1) (1997)
Vinay K. Chaudhri, Peter D. Karp
Querying Schema Information. KRDB (1997)
Suzanne M. Paley, John D. Lowrance, Peter D. Karp
A Generic Knowledge-Base Browser and Editor. AAAI/IAAI (1997)
Peter D. Karp, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole
EcoCyc: an encyclopedia of Escherichia coli genes and metabolism. Nucleic Acids Res. 24 (1) (1996)
Peter D. Karp, Christos A. Ouzounis, Suzanne M. Paley
HinCyc: A Knowledge Base of the Complete Genome and Metabolic Pathways of H. influenzae. ISMB (1996)
Peter D. Karp, Suzanne M. Paley
Integrated Access to Metabolic and Genomic Data. J. Comput. Biol. 3 (1) (1996)
Araceli M. Huerta, Julio Collado-Vides, Peter D. Karp, Kathleen Klose
Three Models of Gene Regulation in E.coli. German Conference on Bioinformatics (1996)
Peter D. Karp, Karen L. Myers, Thomas R. Gruber
The Generic Frame Protocol. IJCAI (1) (1995)
Peter D. Karp, Suzanne M. Paley
Knowledge Representation in the Large. IJCAI (1) (1995)
Peter D. Karp
A Strategy for Database Interoperation. J. Comput. Biol. 2 (4) (1995)
Peter D. Karp, Michael L. Mavrovouniotis
Representing, Analyzing, and Synthesizing Biochemical Pathways. IEEE Expert 9 (2) (1994)
Peter D. Karp, Suzanne M. Paley
Representations of Metabolic Knowledge: Pathways. ISMB (1994)
Peter D. Karp, John D. Lowrance, Thomas M. Strat, David E. Wilkins
The Grasper-CL Graph Management System. LISP Symb. Comput. 7 (4) (1994)
Peter D. Karp, Suzanne M. Paley, Ira B. Greenberg
A Storage System for Scalable Knowledge Representation. CIKM (1994)
Peter D. Karp
Design Methods for Scientific Hypothesis Formation and Their Application to Molecular Biology. Mach. Learn. 12 (1993)

Peter D. Karp.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Peter D. Karp