James C. Hu

Publication Activity (10 Years)

Years Active: 1998-2021
Publications (10 Years): 4

Top Topics

Friendly Interface

Single Nucleotide Polymorphisms

Genome Annotation

Top Venues

Nucleic Acids Res.

PLoS Comput. Biol.

J. Biomed. Semant.

Publications

Jolene Ramsey, Brenley K. McIntosh, Daniel P. Renfro, Suzanne A. Aleksander, Sandra A. LaBonte, Curtis Ross, Adrienne E. Zweifel, Nathan Liles, Shabnam Farrar, Jason J. Gill, Ivan Erill, Sarah Ades, Tanya Z. Berardini, Jennifer A. Bennett, Siobhan M. Brady, Robert Britton, Seth Carbon, Steven M. Caruso, Dave Clements, Ritu Dalia, Meredith Defelice, Erin L. Doyle, Iddo Friedberg, Susan M. R. Gurney, Lee Hughes, Allison Johnson, Jason M. Kowalski, Donghui Li, Ruth C. Lovering, Tamara L. Mans, Fiona McCarthy, Sean D. Moore, Rebecca Murphy, Timothy D. Paustian, Sarah Perdue, Celeste N. Peterson, Birgit M. Prüß, Margaret S. Saha, Robert R. Sheehy, John T. Tansey, Louise Temple, Alexander William Thorman, Saul Trevino, Amy Cheng Vollmer, Virginia Walbot, Joanne Willey, Deborah A. Siegele, James C. Hu
Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO). PLoS Comput. Biol. 17 (10) (2021)
Jolene Ramsey, Helena Rasche, Cory Maughmer, Anthony Criscione, Eleni Mijalis, Mei Liu, James C. Hu, Ry Young, Jason J. Gill
Galaxy and Apollo as a biologist-friendly interface for high-quality cooperative phage genome annotation. PLoS Comput. Biol. 16 (11) (2020)
Michelle G. Giglio, Rebecca Tauber, Suvarna Nadendla, James B. Munro, Dustin Olley, Shoshannah Ball, Elvira Mitraka, Lynn M. Schriml, Pascale Gaudet, Elizabeth T. Hobbs, Ivan Erill, Deborah A. Siegele, James C. Hu, Chris Mungall, Marcus C. Chibucos
ECO, the Evidence & Conclusion Ontology: community standard for evidence information. Nucleic Acids Res. 47 (Database-Issue) (2019)
Deborah A. Siegele, Sandra A. LaBonte, Peter I-Fan Wu, Marcus C. Chibucos, Suvarna Nandendla, Michelle G. Giglio, James C. Hu
Phenotype annotation with the ontology of microbial phenotypes (OMP). J. Biomed. Semant. 10 (1) (2019)
James C. Hu, Gavin Sherlock, Deborah A. Siegele, Suzanne A. Aleksander, Catherine A. Ball, Janos Demeter, Sushanth Gouni, Timothy A. Holland, Peter D. Karp, John E. Lewis, Nathan M. Liles, Brenley K. McIntosh, Huaiyu Mi, Anushya Muruganujan, Farrell Wymore, Paul D. Thomas
PortEco: a resource for exploring bacterial biology through high-throughput data and analysis tools. Nucleic Acids Res. 42 (Database-Issue) (2014)
Brenley K. McIntosh, Daniel P. Renfro, Gwendowlyn S. Knapp, Chanchala R. Lairikyengbam, Nathan M. Liles, Lili Niu, Amanda M. Supak, Anand Venkatraman, Adrienne E. Zweifel, Deborah A. Siegele, James C. Hu
. Nucleic Acids Res. 40 (Database-Issue) (2012)
Daniel P. Renfro, Brenley K. McIntosh, Anand Venkatraman, Deborah A. Siegele, James C. Hu
GONUTS: the Gene Ontology Normal Usage Tracking System. Nucleic Acids Res. 40 (Database-Issue) (2012)
Marcus C. Chibucos, Adrienne E. Zweifel, Deborah A. Siegele, Peter Uetz, Michelle G. Giglio, James C. Hu
The Ontology of Microbial Phenotypes (OMP): A Precomposed Ontology Based on Cross Products from Multiple External Ontologies that is Used for Guiding Microbial Phenotype Annotation. ICBO (2011)
Douglas C. Schmidt, James C. Hu
Developing flexible and high-performance Web servers with frameworks and patterns. ACM Comput. Surv. 32 (1es) (2000)
James C. Hu, Irfan Pyarali, Douglas C. Schmidt
The Object-Oriented Design and Performance of JAWS: A High-performance Web Server Optimized for. Scalable Comput. Pract. Exp. 3 (1) (2000)
Gruia-Catalin Roman, James C. Hu
Plastic transformations: A method for building dependable distributed Applications. IEE Proc. Softw. 145 (2-3) (1998)
James C. Hu, Sumedh Mungee, Douglas C. Schmidt
Techniques for Developing and Measuring High Performance Web Servers over High Speed ATM Networks. INFOCOM (1998)