Adrian J. Shepherd

ORCID

Publication Activity (10 Years)

Years Active: 1993-2020
Publications (10 Years): 3

Top Venues

Nucleic Acids Res.

BMC Bioinform.

PLoS Comput. Biol.

University College London, UK (PHD)

Education History

University College London, UK

PHD

Publications

Lenka Stejskal, William D. Lees, David S. Moss, Machaela Palor, Richard J. Bingham, Adrian J. Shepherd, Joe Grove
Flexibility and intrinsic disorder are conserved features of hepatitis C virus E2 glycoprotein. PLoS Comput. Biol. 16 (2) (2020)
Aviv Omer, Or Shemesh, Ayelet Peres, Pazit Polak, Adrian J. Shepherd, Corey T. Watson, Scott D. Boyd, Andrew M. Collins, William D. Lees, Gur Yaari
VDJbase: an adaptive immune receptor genotype and haplotype database. Nucleic Acids Res. 48 (Database-Issue) (2020)
William D. Lees, Christian E. Busse, Martin Corcoran, Mats Ohlin, Cathrine Scheepers, Frederick A. Matsen, Gur Yaari, Corey T. Watson, Andrew M. Collins, Adrian J. Shepherd
OGRDB: a reference database of inferred immune receptor genes. Nucleic Acids Res. 48 (Database-Issue) (2020)
Jan Czarnecki, Irene Nobeli, Adrian M. Smith, Adrian J. Shepherd
A text-mining system for extracting metabolic reactions from full-text articles. BMC Bioinform. 13 (2012)
William D. Lees, David S. Moss, Adrian J. Shepherd
A computational analysis of the antigenic properties of haemagglutinin in influenza A H3N2. Bioinform. 26 (11) (2010)
Fernando García-Alcalde, Armando Blanco, Adrian J. Shepherd
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs. BMC Bioinform. 11 (2010)
Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd
A realistic assessment of methods for extracting gene/protein interactions from free text. BMC Bioinform. 10 (2009)
Francesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pierluigi Lollini, Kaye E. Basford, Vladimir Brusic
ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization. Briefings Bioinform. 10 (3) (2009)
Francesco Pappalardo, Mark D. Halling-Brown, Marzio Pennisi, Ferdinando Chiacchio, Clare Sansom, Adrian J. Shepherd, David S. Moss, Santo Motta, Vladimir Brusic
The ImmunoGrid Simulator: How to Use It. CIBB (2009)
Mark D. Halling-Brown, David S. Moss, Adrian J. Shepherd
Towards a lightweight generic computational grid framework for biological research. BMC Bioinform. 9 (2008)
Andrew B. Clegg, Adrian J. Shepherd
Benchmarking natural-language parsers for biological applications using dependency graphs. BMC Bioinform. 8 (2007)
Frances M. G. Pearl, C. F. Bennett, James E. Bray, Andrew P. Harrison, Nigel J. Martin, Adrian J. Shepherd, Ian Sillitoe, Janet M. Thornton, Christine A. Orengo
The CATH database: an extended protein family resource for structural and functional genomics. Nucleic Acids Res. 31 (1) (2003)
Adrian J. Shepherd, Nigel J. Martin, Roger G. Johnson, Paul Kellam, Christine A. Orengo
PFDB: a generic protein family database integrating the CATH domain structure database with sequence based protein family resources. Bioinform. 18 (12) (2002)
Frances M. G. Pearl, Nigel J. Martin, James E. Bray, Daniel W. A. Buchan, Andrew P. Harrison, David A. Lee, Gabrielle A. Reeves, Adrian J. Shepherd, Ian Sillitoe, Annabel E. Todd, Janet M. Thornton, Christine A. Orengo
A rapid classification protocol for the CATH Domain Database to support structural genomics. Nucleic Acids Res. 29 (1) (2001)
M. Mar Albà, David A. Lee, Frances M. G. Pearl, Adrian J. Shepherd, Nigel J. Martin, Christine A. Orengo, Paul Kellam
VIDA: a virus database system for the organization of animal virus genome open reading frames. Nucleic Acids Res. 29 (1) (2001)
Denise Gorse, Adrian J. Shepherd, John G. Taylor
The New ERA in Supervised Learning. Neural Networks 10 (2) (1997)
Denise Gorse, Adrian J. Shepherd, John G. Taylor
Traking global minima using a range expansion algorithm. ESANN (1993)

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Publication Activity (10 Years)

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Adrian J. Shepherd