Andrew P. Harrison

Publication Activity (10 Years)

Years Active: 2000-2022
Publications (10 Years): 5

Top Topics

Biological Processes

Convolutional Neural Networks

Protein Interaction

Top Venues

Briefings Bioinform.

J. Cloud Comput.

J. Integr. Bioinform.

Publications

Xiaotian Hu, Cong Feng, Yincong Zhou, Andrew P. Harrison, Ming Chen
DeepTrio: a ternary prediction system for protein-protein interaction using mask multiple parallel convolutional neural networks. Bioinform. 38 (3) (2022)
Shiwei Ma, Qi Song, Huan Tao, Andrew P. Harrison, Shaobo Wang, Wei Liu, Shoukai Lin, Ziding Zhang, Yufang Ai, Huaqin He
Prediction of protein-protein interactions between fungus (Magnaporthe grisea) and rice (Oryza sativa L.). Briefings Bioinform. 20 (2) (2019)
Kuan Li, Chaoqun Xu, Jian Huang, Wei Liu, Lina Zhang, Weifeng Wan, Huan Tao, Ling Li, Shoukai Lin, Andrew P. Harrison, Huaqin He
Prediction and identification of the effectors of heterotrimeric G proteins in rice (Oryza sativa L.). Briefings Bioinform. 18 (2) (2017)
Ming Chen, Andrew P. Harrison, Hugh P. Shanahan, Yuriy L. Orlov
Biological Big Bytes: Integrative Analysis of Large Biological Datasets. J. Integr. Bioinform. 14 (3) (2017)
Youhuang Bai, Xiaozhuan Dai, Andrew P. Harrison, Caroline E. Johnston, Ming Chen
Toward a next-generation atlas of RNA secondary structure. Briefings Bioinform. 17 (1) (2016)
Ibrahim Kabiru Musa, Stuart D. Walker, Anne M. Owen, Andrew P. Harrison
Self-service infrastructure container for data intensive application. J. Cloud Comput. 3 (2014)
Olivia Sanchez-Graillet, Maria A. Stalteri, Joanna Rowsell, Graham J. G. Upton, Andrew P. Harrison
Using surveys of Affymetrix GeneChips to study antisense expression. J. Integr. Bioinform. 7 (2) (2010)
Joanna Rowsell, Renata da Silva Camargo, William B. Langdon, Maria A. Stalteri, Andrew P. Harrison
Uncovering the Expression Patterns of Chimeric Transcripts Using Surveys of Affymetrix GeneChips. J. Integr. Bioinform. 7 (3) (2010)
Farhat N. Memon, Anne M. Owen, Olivia Sanchez-Graillet, Graham J. G. Upton, Andrew P. Harrison
Identifying the impact of G-Quadruplexes on Affymetrix 3' Arrays using Cloud Computing. J. Integr. Bioinform. 7 (2) (2010)
William B. Langdon, Graham J. G. Upton, Renata da Silva Camargo, Andrew P. Harrison
A Survey of Spatial Defects in Homo Sapiens Affymetrix GeneChips. IEEE ACM Trans. Comput. Biol. Bioinform. 7 (4) (2010)
William B. Langdon, Joanna Rowsell, Andrew P. Harrison
Creating regular expressions as mRNA motifs with GP to predict human exon splitting. GECCO (2009)
William B. Langdon, Graham J. G. Upton, Andrew P. Harrison
Probes containing runs of guanines provide insights into the biophysics and bioinformatics of Affymetrix GeneChips. Briefings Bioinform. 10 (3) (2009)
William B. Langdon, Andrew P. Harrison
Evolving DNA motifs to predict GeneChip probe performance. Algorithms Mol. Biol. 4 (2009)
Ming Chen, Andrew P. Harrison
In Silico Analysis of Crop Science: Report on the First China-UK Workshop on Chips, Computers and Crops. Genom. Proteom. Bioinform. 6 (3-4) (2008)
William B. Langdon, Andrew P. Harrison
GP on SPMD parallel graphics hardware for mega Bioinformatics data mining. Soft Comput. 12 (12) (2008)
Olivia Sanchez-Graillet, Joanna Rowsell, William B. Langdon, Maria A. Stalteri, Jose M. Arteaga-Salas, Graham J. G. Upton, Andrew P. Harrison
Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips. J. Integr. Bioinform. 5 (2) (2008)
Jose M. Arteaga-Salas, Harry Zuzan, William B. Langdon, Graham J. G. Upton, Andrew P. Harrison
An overview of image-processing methods for Affymetrix GeneChips. Briefings Bioinform. 9 (1) (2008)
William B. Langdon, Andrew P. Harrison
Evolving Regular Expressions for GeneChip Probe Performance Prediction. PPSN (2008)
Andrew P. Harrison, Caroline E. Johnston, Christine A. Orengo
Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips. BMC Bioinform. 8 (2007)
Oliver Redfern, Andrew P. Harrison, Timothy Dallman, Frances M. G. Pearl, Christine A. Orengo
CATHEDRAL: A Fast and Effective Algorithm to Predict Folds and Domain Boundaries from Multidomain Protein Structures. PLoS Comput. Biol. 3 (11) (2007)
Maria A. Stalteri, Andrew P. Harrison
Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips. BMC Bioinform. 8 (2007)
Frances M. G. Pearl, Annabel E. Todd, Ian Sillitoe, Mark Dibley, Oliver Redfern, Tony E. Lewis, Christopher Bennett, Russell L. Marsden, Alastair Grant, David A. Lee, Adrian Akpor, Michael Maibaum, Andrew P. Harrison, Timothy Dallman, Gabrielle A. Reeves, Ilhem Diboun, Sarah Addou, Stefano Lise, Caroline E. Johnston, Antonio Sillero, Janet M. Thornton, Christine A. Orengo
The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis. Nucleic Acids Res. 33 (Database-Issue) (2005)
Frances M. G. Pearl, C. F. Bennett, James E. Bray, Andrew P. Harrison, Nigel J. Martin, Adrian J. Shepherd, Ian Sillitoe, Janet M. Thornton, Christine A. Orengo
The CATH database: an extended protein family resource for structural and functional genomics. Nucleic Acids Res. 31 (1) (2003)
Andrew P. Harrison, Frances M. G. Pearl, Ian Sillitoe, Tim Slidel, Richard Mott, Janet M. Thornton, Christine A. Orengo
Recognizing the fold of a protein structure. Bioinform. 19 (14) (2003)
Frances M. G. Pearl, Nigel J. Martin, James E. Bray, Daniel W. A. Buchan, Andrew P. Harrison, David A. Lee, Gabrielle A. Reeves, Adrian J. Shepherd, Ian Sillitoe, Annabel E. Todd, Janet M. Thornton, Christine A. Orengo
A rapid classification protocol for the CATH Domain Database to support structural genomics. Nucleic Acids Res. 29 (1) (2001)
Frances M. G. Pearl, David A. Lee, James E. Bray, Ian Sillitoe, Annabel E. Todd, Andrew P. Harrison, Janet M. Thornton, Christine A. Orengo
Assigning genomic sequences to CATH. Nucleic Acids Res. 28 (1) (2000)