Hugh P. Shanahan

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 13

Top Topics

Statistical Analysis

Systems Biology

Middle School Mathematics

Top Venues

J. Integr. Bioinform.

J. Comput. Biol.

Publications

Jamie J. Alnasir, Hugh P. Shanahan
Intra-Exon Motif Correlations as a Proxy Measure for Mean Per-Tile Sequence Quality Data in RNA-Seq. J. Comput. Biol. 30 (2) (2023)
Hugh P. Shanahan, Louise Bezuidenhout
Rethinking the A in FAIR Data: Issues of Data Access and Accessibility in Research. Frontiers Res. Metrics Anal. 7 (2022)
Louise Bezuidenhout, Sara Drummond-Curtis, Bridget Walker, Hugh P. Shanahan, Marcela Alfaro Cordoba
A School and a Network: CODATA-RDA Data Science Summer Schools Alumni Survey. Data Sci. J. 20 (2021)
Hugh P. Shanahan, Nancy Hoebelheinrich, Angus Whyte
Progress toward a comprehensive teaching approach to the FAIR data principles. Patterns 2 (10) (2021)
Daniel Bangert, Joy Davidson, Steve Diggs, Marjan Grootveld, Hugh P. Shanahan, Shanmugasundaram Venkataraman
The CODATA-RDA Data Steward School. Int. J. Digit. Curation 15 (1) (2020)
Louise Bezuidenhout, Robert Quick, Hugh P. Shanahan
"Ethics When You Least Expect It": A Modular Approach to Short Course Data Ethics Instruction. Sci. Eng. Ethics 26 (4) (2020)
Jamie J. Alnasir, Hugh P. Shanahan
The application of Hadoop in structural bioinformatics. Briefings Bioinform. 21 (1) (2020)
Peter McQuilton, Dominique Batista, Oya Beyan, Ramón Granell, Simon J. Coles, Massimiliano Izzo, Allyson L. Lister, Robert Pergl, Philippe Rocca-Serra, Ben Schaap, Hugh P. Shanahan, Milo Thurston, Susanna-Assunta Sansone
Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data. Data Intell. 2 (1-2) (2020)
Peter Wittenburg, Hana Pergl Sustkova, Annalisa Montesanti, Margreet Bloemers, S. H. de Waard, Mark A. Musen, John Graybeal, Kristina M. Hettne, Annika Jacobsen, Robert Pergl, Rob W. W. Hooft, Christine Staiger, Celia W. G. van Gelder, Sebastiaan L. Knijnenburg, A. C. van Arkel, Bert Meerman, Mark D. Wilkinson, Susanna-Assunta Sansone, Philippe Rocca-Serra, Peter McQuilton, Alejandra N. González-Beltrán, G. J. C. Aben, Patrícia Henning, Maria Simone de Menezes Alencar, C. Ribeiro, C. R. L. Silva, Luís Fernando Sayão, Luana Sales, Viviane Veiga, Jefferson Lima, Simone Dib, Paula Xavier dos Santos, R. Murtinho, Jakob Tendel, B. F. Schaap, P. M. Brouwer, A. K. Gavai, Yamine Bouzembrak, Hans J. P. Marvin, Albert Mons, Tobias Kuhn, A. A. Gambardella, Ricardo de Miranda Azevedo, Vesa Muhonen, Mira van der Naald, N. W. Smit, M. J. Buys, Taco F. de Bruin, Fieke Schoots, H. J. E. Goodson, Henry S. Rzepa, Keith G. Jeffery, Hugh P. Shanahan, M. Axton, Veniamin Tkachenko, Anne Deslattes Mays, Natalie Meyers, Michael Conlon, Laurel L. Haak, Erik A. Schultes
The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data. CoRR (2019)
Golestan Sally Radwan, Hugh P. Shanahan
Systems Metagenomics: Applying Systems Biology Thinking to Human Microbiome Analysis. CMSB (2018)
Jamie J. Alnasir, Hugh P. Shanahan
Transcriptomics: Quantifying Non-Uniform Read Distribution Using MapReduce. Int. J. Found. Comput. Sci. 29 (8) (2018)
Ming Chen, Andrew P. Harrison, Hugh P. Shanahan, Yuriy L. Orlov
Biological Big Bytes: Integrative Analysis of Large Biological Datasets. J. Integr. Bioinform. 14 (3) (2017)
Jamie J. Alnasir, Hugh P. Shanahan
A Novel Method to Detect Bias in Short Read NGS Data. J. Integr. Bioinform. 14 (3) (2017)
Hugh P. Shanahan
Can we improve on the identification of transcription factor binding sites? KDD Workshop on Statistical and Relational Learning in Bioinformatics (2009)
Carles Ferrer-Costa, Hugh P. Shanahan, Susan Jones, Janet M. Thornton
HTHquery: a method for detecting DNA-binding proteins with a helix-turn-helix structural motif. Bioinform. 21 (18) (2005)
Hugh P. Shanahan, Janet M. Thornton
An examination of the conservation of surface patch polarity for proteins. Bioinform. 20 (14) (2004)