Creating regular expressions as mRNA motifs with GP to predict human exon splitting.
William B. LangdonJoanna RowsellAndrew P. HarrisonPublished in: GECCO (2009)
Keyphrases
- regular expressions
- dna sequences
- pattern matching
- genetic programming
- finite automata
- query language
- predicting protein
- binding sites
- tree automata
- semistructured data
- human genome
- xml schema
- comparative analysis
- matching algorithm
- molecular biology
- genome wide
- regular languages
- biological sequences
- rna sequences
- data model
- regulatory networks
- query processing
- motif discovery
- query evaluation
- building blocks
- data warehouse
- deterministic finite automata