APBC

Keyphrases

Publications

2008

Jialiang Yang, Louxin Zhang
Run Probability of High-Order Seed Patterns and its Applications to Finding Good Transition Seeds. APBC (2008)
Yang Yang, Bao-Liang Lu, Wen-Yun Yang
Classification of Protein Sequences Based on Word Segmentation Methods. APBC (2008)
Juntao Li, Majid Eshaghi, Jianhua Liu, Karuturi R. Krishna Murthy
Near-sigmoid Modeling to Simultaneously Profile Genome-wide DNA Replication Timing and Efficiency in Single DNA Replication Microarray Studies. APBC (2008)
Alfonso Valencia
Protein Interactions Extracted from Genomes and Papers. APBC (2008)
Sebastian Böcker, Sebastian Briesemeister, Quang Bao Anh Bui, Anke Truß
A Fixed-Parameter Approach for Weighted Cluster Editing. APBC (2008)
Bhaskar DasGupta, Jin Jun, Ion I. Mandoiu
Primer Selection Methods for Detection of Genomic Inversions and Deletions via PAMP. APBC (2008)
Johannes Aßfalg, Jing Gong, Hans-Peter Kriegel, Alexey Pryakhin, Tiandi Wei, Arthur Zimek
Supervised Ensembles of Prediction Methods for Subcellular Localization. APBC (2008)
Dmitry A. Konovalov, Dik Heg
Estimation of Population Allele Frequencies from Small Samples Containing Multiple Generations. APBC (2008)
Cuong Than, Luay Nakhleh
SPR-based Tree Reconciliation: Non-binary Trees and Multiple Solutions. APBC (2008)
Aaron M. Smalter, Jun Huan, Gerald H. Lushington
Chemical Compound Classification with Automatically Mined Structure Patterns. APBC (2008)
Mohamed Ibrahim Abouelhoda, Robert Giegerich, Behshad Behzadi, Jean-Marc Steyaert
Alignment of Minisatellite Maps: A Minimum Spanning Tree-based Approach. APBC (2008)
Bin Ma, Hongyi Yao
Seed Optimization Is No Easier than Optimal Golomb Ruler Design. APBC (2008)
Alireza Hadj Khodabakhshi, Ján Manuch, Arash Rafiey, Arvind Gupta
Structure-Approximating Design of Stable Proteins in 2D HP Model Fortified by Cysteine Monomers. APBC (2008)
Satish Tadepalli, Naren Ramakrishnan, Layne T. Watson, Bhubaneswar Mishra, Richard F. Helm
Simultaneously Segmenting Multiple Gene Expression Time Courses by Analyzing Cluster Dynamics. APBC (2008)
Huzefa Rangwala, George Karypis
fRMSDAlign: Protein Sequence Alignment Using Predicted Local Structure Information for Pairs with Low Sequence Identity. APBC (2008)
Yunlei Li, Dick de Ridder, Marco J. L. de Groot, Marcel J. T. Reinders
Metabolic Pathway Alignment (M-Pal) Reveals Diversity and Alternatives in Conserved Networks. APBC (2008)
Andreas W. M. Dress
Recent Progress in Phylogenetic Combinatorics. APBC (2008)
Xing-Ming Zhao, Rui-Sheng Wang, Luonan Chen, Kazuyuki Aihara
Automatic Modeling of Signal Pathways from Protein-Protein Interaction Networks. APBC (2008)
Mikael Bodén
Predicting Nucleolar Proteins Using Support-Vector Machines. APBC (2008)
Krister M. Swenson, William Arndt, Jijun Tang, Bernard M. E. Moret
Phylogenetic Reconstruction from Complete Gene Orders of Whole Genomes. APBC (2008)
Jiayu Wen, Brian J. Parker, Georg F. Weiller
Analysis of Structural Strand Asymmetry in Non-coding RNAs. APBC (2008)
Huei-Hun Tseng, Zasha Weinberg, Jeremy Gore, Ronald R. Breaker, Walter L. Ruzzo
Finding Non-coding RNAs Through Genome-Scale Clustering. APBC (2008)
Suryani Lukman, Kelvin Sim, Jinyan Li, Yi-Ping Phoebe Chen
Interacting Amino Acid Preferences of 3D Pattern Pairs at the Binding Sites of Transient and Obligate Protein Complexes. APBC (2008)
Wen-Yun Yang, Bao-Liang Lu
String Kernels with Feature Selection for SVM Protein Classification. APBC (2008)
Tyler S. Alioto, Roderic Guigó, Ernesto Picardi, Graziano Pesole
GenePC and ASPIC Integrate Gene Predictions with Expressed Sequence Alignments To Predict Alternative Transcripts. APBC (2008)
Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Siu, Siu-Ming Yiu
Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency. APBC (2008)
Minoru Kanehisa
KEGG for Medical and Pharmaceutical Applications. APBC (2008)
Zhixiang Chen, Bin Fu, Robert T. Schweller, Boting Yang, Zhiyu Zhao, Binhai Zhu
Linear Time Probabilistic Algorithms for the Singular Haplotype Reconstruction Problem from SNP Fragments. APBC (2008)
Morihiro Hayashida, Tatsuya Akutsu
Image Compression-based Approach to Measuring the Similarity of Protein Structures. APBC (2008)
Robert Warren, David Sankoff
Genome Halving with Double Cut and Join. APBC (2008)
Yannick Haudry, Chuang Kee Ong, Laurence Ettwiller, Hugo Bérubé, Ivica Letunic, Misha Kapushesky, Paul-Daniel Weeber, Xi Wang, Julien Gagneur, Charles Girardot, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich
Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress. APBC (2008)
Thomas K. F. Wong, Y. S. Chiu, Tak Wah Lam, Siu-Ming Yiu
A Memory Efficient Algorithm for Structural Alignment of RNAs with Embedded Simple Pseudoknots. APBC (2008)
Alper Küçükural, Osman Ugur Sezerman, Aytül Erçil
Discrimination of Native Folds Using Network Properties of Protein Structures. APBC (2008)
Ryuichiro Nakato, Osamu Gotoh
A Novel Method for Reducing Computational Complexity of Whole Genome Sequence Alignment. APBC (2008)
Alvis Brazma, Satoru Miyano, Tatsuya Akutsu
Preface. APBC (2008)
Jin-Dong Kim, Tomoko Ohta, Kanae Oda, Jun'ichi Tsujii
From Text to Pathway: Corpus Annotation for Knowledge Acquisition from Biomedical Literature. APBC (2008)
Christopher James Langmead, Sumit Kumar Jha
Symbolic Approaches for Finding Control Strategies in Boolean Networks. APBC (2008)
Melissa J. Davis, Andrew F. Newman, Imran Khan, Jane Hunter, Mark A. Ragan
Integrating Hierarchical Controlled Vocabularies With OWL Ontology: A Case Study from the Domain of Molecular Interactions. APBC (2008)
Yuan-Peng Li, Bao-Liang Lu
Semantic Similarity Definition over Gene Ontology by Further Mining of the Information Content. APBC (2008)
Oliver Sander, Francisco S. Domingues, Hongbo Zhu, Thomas Lengauer, Ingolf Sommer
Structural Descriptors of Protein-Protein Binding Sites. APBC (2008)

volume 6, 2008

Proceedings of the 6th Asia-Pacific Bioinformatics Conference, APBC 2008, 14-17 January 2008, Kyoto, Japan APBC 6 (2008)

2007

volume 5, 2007

Proceedings of 5th Asia-Pacific Bioinformatics Conference, APBC 2007, 15-17 January 2007, Hong Kong, China APBC 5 (2007)