Heinz Stockinger

Publication Activity (10 Years)

Years Active: 2000-2022
Publications (10 Years): 7

Top Topics

Phylogenetic Trees

Approximate Matches

Top Venues

Nucleic Acids Res.

Publications

Dimitri Höhler, Wayne Pfeiffer, Vassilios Ioannidis, Heinz Stockinger, Alexandros Stamatakis
RAxML Grove: an empirical phylogenetic tree database. Bioinform. 38 (6) (2022)
Severine Duvaud, Chiara Gabella, Frédérique Lisacek, Heinz Stockinger, Vassilios Ioannidis, Christine Durinx
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users. Nucleic Acids Res. 49 (Webserver-Issue) (2021)
Diana Coman Schmid, Katrin Crameri, Sabine Oesterle, Bernd Rinn, Thierry Sengstag, Heinz Stockinger, Leila T. Alexander, Jonathan Barda, Christian Bolliger, Urban Borstnik, Gerhard Bräunlich, Olivier Byrde, Jérôme Dauvillier, Robin Engler, Pablo Escobar Lopez, Volker Flegel, Martin Fox, Sofia Georgakopoulou, Jani Heikkinen, Martin Jacquot, Nicolas Kowenski, Guillermo Losilla, Sergio Maffioletti, Jorge Molina, Diego Moreno, Allen Neeser, Michal Okoniewski, Warren Paulus, Kevin Sayers, Torsten Schwede, Jaroslaw Surkont, Richard Wartenburger, Thomas Wüst
SPHN - The BioMedIT Network: A Secure IT Platform for Research with Sensitive Human Data. MIE (2020)
Rachel Drysdale, Charles E. Cook, Robert Petryszak, Vivienne Baillie Gerritsen, Mary Barlow, Elisabeth Gasteiger, Franziska Gruhl, Jürgen Haas, Jerry Lanfear, Rodrigo Lopez, Nicole Redaschi, Heinz Stockinger, Daniel Teixeira, Aravind Venkatesan, Alex Bateman, Alan Bridge, Guy Cochrane, Robert D. Finn, Frank Oliver Glöckner, Marc Hanauer, Thomas M. Keane, Andrew Leach, Luana Licata, Per Oksvold, Sandra E. Orchard, Christine A. Orengo, Helen E. Parkinson, Bengt Persson, Pablo Porras, Jordi Rambla, Ana Rath, Charlotte Rodwell, Ugis Sarkans, Dietmar Schomburg, Ian Sillitoe, J. Dylan Spalding, Mathias Uhlén, Sameer Velankar, Juan Antonio Vizcaíno, Kalle von Feilitzen, Christian von Mering, Andrew D. Yates, Niklas Blomberg, Christine Durinx, Johanna R. McEntyre
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences. Bioinform. 36 (8) (2020)
Ana Claudia Sima, Tarcisio Mendes de Farias, Erich Zbinden, Maria Anisimova, Manuel Gil, Heinz Stockinger, Kurt Stockinger, Marc Robinson-Rechavi, Christophe Dessimoz
Enabling semantic queries across federated bioinformatics databases. Database J. Biol. Databases Curation 2019 (2019)
Erich Schikuta, Helmut Wanek, Heinz Stockinger, Kurt Stockinger, Thomas Fürle, Oliver Jorns, Christoph Löffelhardt, Peter Brezany, Minh Dang, Thomas A. Mück
ViPIOS - VIenna Parallel Input Output System: Language, Compiler and Advanced Data Structure Support for Parallel I/O Operations. CoRR (2018)
Jon C. Ison, Kristoffer Rapacki, Hervé Ménager, Matús Kalas, Emil Rydza, Piotr Chmura, Christian Anthon, Niall Beard, Karel Berka, Dan M. Bolser, Tim Booth, Anthony Bretaudeau, Jan Brezovsky, Rita Casadio, Gianni Cesareni, Frederik Coppens, Michael Cornell, Gianmauro Cuccuru, Kristian Davidsen, Gianluca Della Vedova, Tunca Dogan, Olivia Doppelt-Azeroual, Laura Emery, Elisabeth Gasteiger, Thomas Gatter, Tatyana Goldberg, Marie Grosjean, Björn A. Grüning, Manuela Helmer-Citterich, Hans Ienasescu, Vassilios Ioannidis, Martin Closter Jespersen, Rafael C. Jimenez, Nick S. Juty, Peter Juvan, Maximilian Koch, Camille Laibe, Jing-Woei Li, Luana Licata, Fabien Mareuil, Ivan Micetic, Rune Møllegaard Friborg, Sébastien Moretti, Chris Morris, Steffen Möller, Aleksandra Nenadic, Hedi Peterson, Giuseppe Profiti, Peter M. Rice, Paolo Romano, Paola Roncaglia, Rabie Saidi, Andrea Schafferhans, Veit Schwämmle, Callum Smith, Maria Maddalena Sperotto, Heinz Stockinger, Radka Svobodová Vareková, Silvio C. E. Tosatto, Victor de la Torre, Paolo Uva, Allegra Via, Guy Yachdav, Federico Zambelli, Gert Vriend, Burkhard Rost, Helen E. Parkinson, Peter Løngreen, Søren Brunak
Tools and data services registry: a community effort to document bioinformatics resources. Nucleic Acids Res. 44 (Database-Issue) (2016)
Linda Dib, Xavier Meyer, Panu Artimo, Vassilios Ioannidis, Heinz Stockinger, Nicolas Salamin
Coev-web: a web platform designed to simulate and evaluate coevolving positions along a phylogenetic tree. BMC Bioinform. 16 (2015)
Elke Schaper, Alexander Korsunsky, Julija Pecerska, Antonio Messina, Riccardo Murri, Heinz Stockinger, Stefan Zoller, Ioannis Xenarios, Maria Anisimova
TRAL: tandem repeat annotation library. Bioinform. 31 (18) (2015)
Heinz Stockinger, Adrian M. Altenhoff, Konstantin Arnold, Amos Bairoch, Frederic B. Bastian, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane, Philippe Le Mercier, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi, Jacques Rougemont, Torsten Schwede, Christian von Mering, Erik van Nimwegen, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Mario Valle, Hannes Schabauer, Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Nicolas Salamin
Optimization strategies for fast detection of positive selection on phylogenetic trees. Bioinform. 30 (8) (2014)
Sébastien Moretti, Balazs Laurenczy, Walid H. Gharib, Briséïs Castella, Arnold Kuzniar, Hannes Schabauer, Romain A. Studer, Mario Valle, Nicolas Salamin, Heinz Stockinger, Marc Robinson-Rechavi
Selectome update: quality control and computational improvements to a database of positive selection. Nucleic Acids Res. 42 (Database-Issue) (2014)
Peter Z. Kunszt, Sergio Maffioletti, Dean Flanders, Markus Eurich, Thomas Michael Bohnert, Andrew Edmonds, Heinz Stockinger, Sigve Haug, Almerima Jamakovic-Kapic, Placi Flury, Simon Leinen, Eryk Schiller
Towards a Swiss National Research Infrastructure. CoRR (2014)
Peter Z. Kunszt, Sergio Maffioletti, Dean Flanders, Markus Eurich, Eryk Schiller, Thomas Michael Bohnert, Andy Edmonds, Heinz Stockinger, Almerima Jamakovic-Kapic, Sigve Haug, Placi Flury, Simon Leinen
Towards a Swiss National Research Infrastructure. Euro-Par Workshops (2013)
Hannes Schabauer, Mario Valle, Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Ziheng Yang, Nicolas Salamin
SlimCodeML: An Optimized Version of CodeML for the Branch-Site Model. IPDPS Workshops (2012)
Sébastien Moretti, Riccardo Murri, Sergio Maffioletti, Arnold Kuzniar, Briséïs Castella, Nicolas Salamin, Marc Robinson-Rechavi, Heinz Stockinger
gcodeml: A Grid-enabled Tool for Detecting Positive Selection in Biological Evolution. HealthGrid (2012)
Panu Artimo, Manohar Jonnalagedda, Konstantin Arnold, Delphine Baratin, Gábor Csárdi, Edouard De Castro, Severine Duvaud, Volker Flegel, Arnaud Fortier, Elisabeth Gasteiger, Aurélien Grosdidier, Céline Hernandez, Vassilios Ioannidis, Dmitri Kuznetsov, Robin Liechti, Sébastien Moretti, Khaled Mostaguir, Nicole Redaschi, Grégoire Rossier, Ioannis Xenarios, Heinz Stockinger
ExPASy: SIB bioinformatics resource portal. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Thorsten Kleinjung, Joppe W. Bos, Arjen K. Lenstra, Dag Arne Osvik, Kazumaro Aoki, Scott Contini, Jens Franke, Emmanuel Thomé, Pascal Jermini, Michela Thiémard, Paul C. Leyland, Peter L. Montgomery, Andrey Timofeev, Heinz Stockinger
A heterogeneous computing environment to solve the 768-bit RSA challenge. Clust. Comput. 15 (1) (2012)
Sébastien Moretti, Riccardo Murri, Sergio Maffioletti, Arnold Kuzniar, Briséïs Castella, Nicolas Salamin, Marc Robinson-Rechavi, Heinz Stockinger
gcodeml: A Grid-enabled Tool for Detecting Positive Selection in Biological Evolution CoRR (2012)
Gianni Pucciani, Andrea Domenici, Flavia Donno, Heinz Stockinger
A performance study on the synchronisation of heterogeneous Grid databases using CONStanza. Future Gener. Comput. Syst. 26 (6) (2010)
Adam Kraut, Sébastien Moretti, Marc Robinson-Rechavi, Heinz Stockinger, Dean Flanders
Phylogenetic Code in the Cloud - Can it Meet the Expectations? HealthGrid (2010)
Steve Pettifer, Jon C. Ison, Matús Kalas, Dave Thorne, Philip McDermott, Inge Jonassen, Ali Liaquat, José María Fernández, Jose Manuel Rodriguez, David G. Pisano, Christophe Blanchet, Mahmut Uludag, Peter M. Rice, Edita Bartaseviciute, Kristoffer Rapacki, Maarten L. Hekkelman, Olivier Sand, Heinz Stockinger, Andrew B. Clegg, Erik Bongcam-Rudloff, Jean Salzemann, Vincent Breton, Teresa K. Attwood, Graham Cameron, Gert Vriend
The EMBRACE web service collection. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
George A. Gravvanis, John P. Morrison, Heinz Stockinger
Special Section: Defining the grid, experiences and future trends. Future Gener. Comput. Syst. 25 (4) (2009)
Heinz Stockinger, Alexander F. Auch, Markus Göker, Jan P. Meier-Kolthoff, Alexandros Stamatakis
Large-Scale Co-Phylogenetic Analysis on the Grid. Int. J. Grid High Perform. Comput. 1 (1) (2009)
Erich Schikuta, Thomas Weishäupl, Flavia Donno, Heinz Stockinger, Elisabeth Vinek, Helmut Wanek, Christoph Witzany, Irfan Ul Haq
Business in the Grid CoRR (2009)
Heinz Stockinger, Teresa K. Attwood, Shahid Nadeem Chohan, Richard G. Côté, Philippe Cudré-Mauroux, Laurent Falquet, Pedro L. Fernandes, Robert D. Finn, Taavi Hupponen, Eija Korpelainen, Alberto Labarga, Aurélie Laugraud, Tania Lima, Evangelos Pafilis, Marco Pagni, Steve Pettifer, Isabelle Phan, Nazim Rahman
Experience using web services for biological sequence analysis. Briefings Bioinform. 9 (6) (2008)
Marco Pagni, Jörg Hau, Heinz Stockinger
A Multi-protocol Bioinformatics Web Service: Use SOAP, Take a REST or Go with HTML. CCGRID (2008)
Nabil Abdennadher, Peter Engel, Derek Feichtinger, Dean Flanders, Placi Flury, Sigve Haug, Pascal Jermini, Sergio Maffioletti, Cesare Pautasso, Heinz Stockinger, Wibke Sudholt, Michela Thiémard, Nadya Williams, Christoph Witzig
Initializing a National Grid Infrastructure - Lessons Learned from the Swiss National Grid Association Seed Project. CCGRID (2008)
Heinz Stockinger
Defining the grid: a snapshot on the current view. J. Supercomput. 42 (1) (2007)
Ashiq Anjum, Richard McClatchey, Heinz Stockinger, Arshad Ali, Ian Willers, Michael Thomas, Muhammad Sagheer, Khawar Hasham, Omer Alvi
DIANA Scheduling Hierarchies for Optimizing Bulk Job Scheduling CoRR (2007)
Richard McClatchey, Ashiq Anjum, Heinz Stockinger, Arshad Ali, Ian Willers, Michael Thomas
Data Intensive and Network Aware (DIANA) Grid Scheduling. J. Grid Comput. 5 (1) (2007)
Richard McClatchey, Ashiq Anjum, Heinz Stockinger, Arshad Ali, Ian Willers, Michael Thomas
Scheduling in Data Intensive and Network Aware (DIANA) Grid Environments CoRR (2007)
Michael Podvinec, Sergio Maffioletti, Peter Z. Kunszt, Konstantin Arnold, Lorenzo Cerutti, Bruno Nyffeler, Ralph Schlapbach, Can Türker, Heinz Stockinger, Arthur J. Thomas, Manuel C. Peitsch, Torsten Schwede
The SwissBioGrid Project: Objectivse, Preliminary Results and Lessons Learned. e-Science (2006)
Ashiq Anjum, Richard McClatchey, Heinz Stockinger, Arshad Ali, Ian Willers, Michael Thomas, Muhammad Sagheer, Khawar Hasham, Omer Alvi
DIANA Scheduling Hierarchies for Optimizing Bulk Job Scheduling. e-Science (2006)
Andrea Domenici, Flavia Donno, Gianni Pucciani, Heinz Stockinger
Relaxed Data Consistency with CONStanza. CCGRID (2006)
Siegfried Benkner, Heinz Stockinger
Grid Data Management: Minisymposium Abstract. PARA (2006)
Heinz Stockinger
Grid Computing: A Critical Discussion on Business Applicability. IEEE Distributed Syst. Online 7 (6) (2006)
Heinz Stockinger, Marco Pagni, Lorenzo Cerutti, Laurent Falquet
Grid Approach to Embarrassingly Parallel CPU-Intensive Bioinformatics Problems. e-Science (2006)
Heinz Stockinger, Flavia Donno, Giulio Eulisse, Mirco Mazzucato, Conrad Steenberg
Matchmaking, Datasets and Physics Analysis. ICPP Workshops (2005)
Erwin Laure, Heinz Stockinger, Kurt Stockinger
Performance engineering in data Grids. Concurr. Pract. Exp. 17 (2-4) (2005)
Peter Z. Kunszt, Erwin Laure, Heinz Stockinger, Kurt Stockinger
File-based replica management. Future Gener. Comput. Syst. 21 (1) (2005)
David G. Cameron, James Casey, Leanne Guy, Peter Z. Kunszt, Sophie Lemaitre, Gavin McCance, Heinz Stockinger, Kurt Stockinger, Giuseppe Andronico, William H. Bell, Itzhak Ben-Akiva, Diana Bosio, Radovan Chytracek, Andrea Domenici, Flavia Donno, Wolfgang Hoschek, Erwin Laure, Levi Lucio, A. Paul Millar, Livio Salconi, Ben Segal, Mika Silander
Replica Management in the European DataGrid Project. J. Grid Comput. 2 (4) (2004)
Heinz Stockinger
Editorial. J. Grid Comput. 2 (1) (2004)
Paul Graham, Matti Heikkurinen, Jarek Nabrzyski, Ariel Oleksiak, Mark Parsons, Heinz Stockinger, Kurt Stockinger, Maciej Stroinski, Jan Weglarz
EU Funded Grid Development in Europe. European Across Grids Conference (2004)
Heinz Stockinger, Flavia Donno, Roberto Puccinelli, Kurt Stockinger
Data Grid tutorials with hands-on experience. CCGRID (2004)
Andrew Hanushevsky, Heinz Stockinger
A Proxy Service for the xrootd Data Server. SAG (2004)
Kurt Stockinger, Heinz Stockinger, Lukasz Dutka, Renata Slota, Darin Nikolow, Jacek Kitowski
Access Cost Estimation for Unified Grid Storage Systems. GRID (2003)
Heinz Stockinger, Flavia Donno, Erwin Laure, Shahzad Muzaffar, Peter Z. Kunszt, Giuseppe Andronico, A. Paul Millar
Grid Data Management in Action: Experience in Running and Supporting Data Management Services in the EU DataGrid Project CoRR (2003)
Peter Z. Kunszt, Erwin Laure, Heinz Stockinger, Kurt Stockinger
Advanced Replica Management with Reptor. PPAM (2003)
Heinz Stockinger, Asad Samar, Shahzad Muzaffar, Flavia Donno
Grid Data Mirroring Package (GDMP). Sci. Program. 10 (2) (2002)
Rajkumar Buyya, David Abramson, Jonathan Giddy, Heinz Stockinger
Economic models for resource management and scheduling in Grid computing. Concurr. Comput. Pract. Exp. 14 (13-15) (2002)
Heinz Stockinger, Asad Samar, Koen Holtman, William E. Allcock, Ian T. Foster, Brian Tierney
File and Object Replication in Data Grids. Clust. Comput. 5 (3) (2002)
Ann L. Chervenak, Ewa Deelman, Ian T. Foster, Leanne Guy, Wolfgang Hoschek, Adriana Iamnitchi, Carl Kesselman, Peter Z. Kunszt, Matei Ripeanu, Robert Schwartzkopf, Heinz Stockinger, Kurt Stockinger, Brian Tierney
Giggle: a framework for constructing scalable replica location services. SC (2002)
Heinz Stockinger, Andrew Hanushevsky
HTTP redirection for replica catalogue lookups in data grids. SAC (2002)
Heinz Stockinger, Omer F. Rana, Reagan Moore, André Merzky
Data Management for Grid Environments. HPCN Europe (2001)
Heinz Stockinger, Asad Samar, Koen Holtman, William E. Allcock, Ian T. Foster, Brian Tierney
File and Object Replication in Data Grids. HPDC (2001)
Rajkumar Buyya, Heinz Stockinger, Jonathan Giddy, David Abramson
Economic Models for Management of Resources in Grid Computing CoRR (2001)
Heinz Stockinger
Distributed Database Management Systems and the Data Grid. MSS (2001)
Dirk Düllmann, Wolfgang Hoschek, Francisco Javier Jaén-Martínez, Ben Segal, Heinz Stockinger, Kurt Stockinger, Asad Samar
Models for Replica Synchronisation and Consistency in a Data Grid. HPDC (2001)
Heinz Stockinger, Kurt Stockinger, Erich Schikuta, Ian Willers
Towards a Cost Model for Distributed and Replicated Data Stores. PDP (2001)
Wolfgang Hoschek, Francisco Javier Jaén-Martínez, Asad Samar, Heinz Stockinger, Kurt Stockinger
Data Management in an International Data Grid Project. GRID (2000)