Lydie Lane

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 7

Top Topics

Protein Function

Undergraduate Students

Drosophila Melanogaster

Top Venues

Nucleic Acids Res.

Database J. Biol. Databases Curation

Publications

Maxat Kulmanov, Francisco J. Guzmán-Vega, Paula Duek Roggli, Lydie Lane, Stefan T. Arold, Robert Hoehndorf
Protein function prediction as approximate semantic entailment. Nat. Mac. Intell. 6 (2) (2024)
Lydie Lane, Kasun Samarasinghe, Pierre-André Michel
A federated query between neXtProt and OrthoDB retrieves 44 uncharacterized human proteins highly expressed in the brain and conserved in Drosophila melanogaster. SWAT4HCLS (2023)
Paula D. Duek, Camille Mary, Monique Zahn-Zabal, Amos Bairoch, Lydie Lane
Functionathon: a manual data mining workflow to generate functional hypotheses for uncharacterized human proteins and its application by undergraduate students. Database J. Biol. Databases Curation 2021 (2021)
Monique Zahn-Zabal, Pierre-André Michel, Alain Gateau, Frédéric Nikitin, Mathieu Schaeffer, Estelle Audot, Pascale Gaudet, Paula D. Duek, Daniel Dinis Teixeira, Valentine Rech de Laval, Kasun Samarasinghe, Amos Bairoch, Lydie Lane
The neXtProt knowledgebase in 2020: data, tools and usability improvements. Nucleic Acids Res. 48 (Database-Issue) (2020)
Mathieu Schaeffer, Alain Gateau, Daniel Dinis Teixeira, Pierre-André Michel, Monique Zahn-Zabal, Lydie Lane
The neXtProt peptide uniqueness checker: a tool for the proteomics community. Bioinform. 33 (21) (2017)
Pascale Gaudet, Pierre-André Michel, Monique Zahn-Zabal, Aurore Britan, Isabelle Cusin, Marcin Domagalski, Paula D. Duek, Alain Gateau, Anne Gleizes, Valérie Hinard, Valentine Rech de Laval, JinJin Lin, Frédéric Nikitin, Mathieu Schaeffer, Daniel Dinis Teixeira, Lydie Lane, Amos Bairoch
The neXtProt knowledgebase on human proteins: 2017 update. Nucleic Acids Res. 45 (Database-Issue) (2017)
Olivier Sallou, Paula D. Duek, Thomas A. Darde, Olivier Collin, Lydie Lane, Frédéric Chalmel
PepPSy: a web server to prioritize gene products in experimental and biocuration workflows. Database J. Biol. Databases Curation 2016 (2016)
Christine Chichester, Oliver Karch, Pascale Gaudet, Lydie Lane, Barend Mons, Amos Bairoch
Converting neXtProt into Linked Data and nanopublications. Semantic Web 6 (2) (2015)
Pascale Gaudet, Pierre-André Michel, Monique Zahn-Zabal, Isabelle Cusin, Paula D. Duek, Olivier Evalet, Alain Gateau, Anne Gleizes, Mario Pereira, Daniel Dinis Teixeira, Ying Zhang, Lydie Lane, Amos Bairoch
The neXtProt knowledgebase on human proteins: current status. Nucleic Acids Res. 43 (Database-Issue) (2015)
Heinz Stockinger, Adrian M. Altenhoff, Konstantin Arnold, Amos Bairoch, Frederic B. Bastian, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane, Philippe Le Mercier, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi, Jacques Rougemont, Torsten Schwede, Christian von Mering, Erik van Nimwegen, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Christine Chichester, Pascale Gaudet, Oliver Karch, Paul Groth, Lydie Lane, Amos Bairoch, Barend Mons, Antonis Loizou
Querying neXtProt nanopublications and their value for insights on sequence variants and tissue expression. J. Web Semant. 29 (2014)
Lydie Lane, Ghislaine Argoud-Puy, Aurore Britan, Isabelle Cusin, Paula D. Duek, Olivier Evalet, Alain Gateau, Pascale Gaudet, Anne Gleizes, Alexandre Masselot, Catherine Zwahlen, Amos Bairoch
neXtProt: a knowledge platform for human proteins. Nucleic Acids Res. 40 (Database-Issue) (2012)
Guido Bologna, Anne-Lise Veuthey, Marco Pagni, Lydie Lane, Amos Bairoch
A Preliminary Study on the Prediction of Human Protein Functions. IWINAC (1) (2011)
Pascale Gaudet, Lydie Lane, Petra Fey, Alan Bridge, Sylvain Poux, Andrea H. Auchincloss, Kristian B. Axelsen, Silvia Braconi-Quintaje, Emmanuel Boutet, P. Brown, Elisabeth Coudert, Ruchira S. Datta, W. C. de Lima, Tulio de Oliveira, Severine Duvaud, N. Farriol-Mathis, Serenella Ferro-Rojas, Marc Feuermann, Alain Gateau, Ursula Hinz, Chantal Hulo, Janet James, Silvia Jimenez, Florence Jungo, Guillaume Keller, Phillippe Lemercier, Damien Lieberherr, Madelaine Moinat, Anastasia N. Nikolskaya, Ivo Pedruzzi, Catherine Rivoire, Bernd Roechert, Michel Schneider, E. Stanley, Michael Tognolli, Kimmen Sjölander, Lydie Bougueleret, Rex L. Chisholm, Amos Bairoch
Collaborative annotation of genes and proteins between UniProtKB/Swiss-Prot and dictyBase. Database J. Biol. Databases Curation 2009 (2009)