Frédérique Lisacek

Publication Activity (10 Years)

Years Active: 1999-2024
Publications (10 Years): 9

Top Topics

International Program Committee

Dynamic Taxonomies

Top Venues

Nucleic Acids Res.

Publications

Karina Martinez, Jon Agirre, Yukie Akune, Kiyoko F. Aoki-Kinoshita, Cecilia N. Arighi, Kristian B. Axelsen, Evan Bolton, Emily Bordeleau, Nathan J. Edwards, Elisa Fadda, Ten Feizi, Catherine A. Hayes, Callum M. Ives, Hiren J. Joshi, Khakurel Krishna Prasad, Sofia Kossida, Frédérique Lisacek, Yan Liu, Thomas Lütteke, Junfeng Ma, Adnan Malik, Maria Jesus Martin, Akul Y. Mehta, Sriram Neelamegham, Kalpana Panneerselvam, René Ranzinger, Sylvie Ricard-Blum, Gaoussou Sanou, Vijay Shanker, Paul D. Thomas, Michael Tiemeyer, James Urban, Randi Vita, Jeet Vora, Yasunori Yamamoto, Raja Mazumder
Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy. Database J. Biol. Databases Curation 2024 (2024)
Catherine A. Hayes, Vincenzo Daponte, Frédérique Lisacek
Linking glycan and protein data. SWAT4HCLS (2023)
Vincenzo Daponte, Catherine A. Hayes, Julien Mariethoz, Frédérique Lisacek
Glycan Semantic Model Applications in Substructure Search. SWAT4HCLS (2022)
François Bonnardel, Julien Mariethoz, Serge Pérez, Anne Imberty, Frédérique Lisacek
LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification. Nucleic Acids Res. 49 (Database-Issue) (2021)
Severine Duvaud, Chiara Gabella, Frédérique Lisacek, Heinz Stockinger, Vassilios Ioannidis, Christine Durinx
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users. Nucleic Acids Res. 49 (Webserver-Issue) (2021)
Areski Flissi, Emma Ricart, Clémentine Campart, Mickael Chevalier, Yoann Dufresne, Juraj Michalik, Philippe Jacques, Christophe Flahaut, Frédérique Lisacek, Valérie Leclère, Maude Pupin
Norine: update of the nonribosomal peptide resource. Nucleic Acids Res. 48 (Database-Issue) (2020)
François Bonnardel, Julien Mariethoz, Sebastian Salentin, Xavier Robin, Michael Schroeder, Serge Pérez, Frédérique Lisacek, Anne Imberty
UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands. Nucleic Acids Res. 47 (Database-Issue) (2019)
Emma Ricart, Valérie Leclère, Areski Flissi, Markus Müller, Maude Pupin, Frédérique Lisacek
rBAN: retro-biosynthetic analysis of nonribosomal peptides. J. Cheminformatics 11 (1) (2019)
Julien Mariethoz, Khaled Khatib, Davide Alocci, Matthew P. Campbell, Niclas G. Karlsson, Nicolle H. Packer, Elaine H. Mullen, Frédérique Lisacek
SugarBindDB, a resource of glycan-mediated host-pathogen interactions. Nucleic Acids Res. 44 (Database-Issue) (2016)
Davide Alocci, Julien Mariethoz, Frédérique Lisacek
Glycan Pattern Search. SWAT4LS (2015)
Matthew P. Campbell, René Ranzinger, Thomas Lütteke, Julien Mariethoz, Catherine A. Hayes, Jingyu Zhang, Yukie Akune, Kiyoko F. Aoki-Kinoshita, David Damerell, Giorgio Carta, William S. York, Stuart M. Haslam, Hisashi Narimatsu, Pauline M. Rudd, Niclas G. Karlsson, Nicolle H. Packer, Frédérique Lisacek
Toolboxes for a standardised and systematic study of glycans. BMC Bioinform. 15 (S-1) (2014)
Heinz Stockinger, Adrian M. Altenhoff, Konstantin Arnold, Amos Bairoch, Frederic B. Bastian, Sven Bergmann, Lydie Bougueleret, Philipp Bucher, Mauro Delorenzi, Lydie Lane, Philippe Le Mercier, Frédérique Lisacek, Olivier Michielin, Patricia M. Palagi, Jacques Rougemont, Torsten Schwede, Christian von Mering, Erik van Nimwegen, Daniel Walther, Ioannis Xenarios, Mihaela Zavolan, Evgeny M. Zdobnov, Vincent Zoete, Ron D. Appel
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Marco Masseroli, Barend Mons, Erik Bongcam-Rudloff, Stefano Ceri, Alexander E. Kel, François Rechenmann, Frédérique Lisacek, Paolo Romano
Integrated Bio-Search: challenges and trends for the integration, search and comprehensive processing of biological information. BMC Bioinform. 15 (S-1) (2014)
Lou Götz, Jodie L. Abrahams, Julien Mariethoz, Pauline M. Rudd, Niclas G. Karlsson, Nicolle H. Packer, Matthew P. Campbell, Frédérique Lisacek
GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination. Bioinform. 30 (21) (2014)
Matthew P. Campbell, Robyn Peterson, Julien Mariethoz, Elisabeth Gasteiger, Yukie Akune, Kiyoko F. Aoki-Kinoshita, Frédérique Lisacek, Nicolle H. Packer
UniCarbKB: building a knowledge platform for glycoproteomics. Nucleic Acids Res. 42 (Database-Issue) (2014)
Paolo Romano, Frédérique Lisacek, Marco Masseroli
NETTAB 2012 on "Integrated Bio-Search". BMC Bioinform. 15 (S-1) (2014)
Dominique Koua, Age Brauer, Silja Laht, Lauris Kaplinski, Philippe Favreau, Maido Remm, Frédérique Lisacek, Reto Stöcklin
ConoDictor: a tool for prediction of conopeptide superfamilies. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Frédérique Lisacek, Patrick Koks, Pascale Berthault, Grégoire Rossier, Guy Bottu, Jacques van Helden, Jean Sylvestre, Jean-Pierre Kraehenbuhl, Jack A. M. Leunissen
eBiomics - A Website Promoting Good Practices and Specific Methods for using Bioinformatics Resources. BIOINFORMATICS (2012)
Xavier Robin, Natacha Turck, Alexandre Hainard, Natalia Tiberti, Frédérique Lisacek, Jean-Charles Sanchez, Markus Müller
pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinform. 12 (2011)
Catherine A. Hayes, Niclas G. Karlsson, Weston B. Struwe, Frédérique Lisacek, Pauline M. Rudd, Nicolle H. Packer, Matthew P. Campbell
UniCarb-DB: a database resource for glycomic discovery. Bioinform. 27 (9) (2011)
Andreas Quandt, Patricia Hernandez, Alexandre Masselot, Céline Hernandez, Sergio Maffioletti, Cesare Pautasso, Ron D. Appel, Frédérique Lisacek
swissPIT: a novel approach for pipelined analysis of mass spectrometry data. Bioinform. 24 (11) (2008)
Christine Froidevaux, Frédérique Lisacek, Bastien Rance
Extracting Sequential Nuggets of Knowledge. DEXA (2007)
Imad Tbahriti, Christine Chichester, Frédérique Lisacek, Patrick Ruch
Using argumentation to retrieve articles with similar citations: An inquiry into improving related articles search in the MEDLINE digital library. Int. J. Medical Informatics 75 (6) (2006)
Patrick Ruch, Robert H. Baud, Christine Chichester, Antoine Geissbühler, Frédérique Lisacek, Johan Marty, Dietrich Rebholz-Schuhmann, Imad Tbahriti, Anne-Lise Veuthey
Extracting Key Sentences with Latent Argumentative Structuring. MIE (2005)
Imad Tbahriti, Christine Chichester, Frédérique Lisacek, Patrick Ruch
Using Argumentation to Retrieve Articles with Similar Citations from MEDLINE. NLPBA/BioNLP (2004)
Christine Chichester, Frédéric Nikitin, Jean-Christophe Ravarini, Frédérique Lisacek
Consistency checks for characterizing protein forms. Comput. Biol. Chem. 27 (1) (2003)
Frédéric Nikitin, Frédérique Lisacek
Investigating protein domain combinations in complete proteomes. Comput. Biol. Chem. 27 (4-5) (2003)
Pedro Gonnet, Frédérique Lisacek
Probabilistic alignment of motifs with sequences. Bioinform. 18 (8) (2002)
Frédérique Lisacek
Algorithms on Strings, Trees and Sequences: Dan Gusfield. Comput. Chem. 24 (1) (2000)
Laurence Vignal, Frédérique Lisacek, Joël Quinqueton, Yves D'Aubenton-Carafa, Claude Thermes
A Multi-agent System Simulating Human Splice Site Recognition. Comput. Chem. 23 (3-4) (1999)