Maude Pupin

Publication Activity (10 Years)

Years Active: 2006-2022
Publications (10 Years): 8

Top Topics

Chemical Structures

Fingerprint Image Quality

Tandem Mass Spectra

Top Venues

J. Comput. Aided Mol. Des.

J. Cheminformatics

Nucleic Acids Res.

Publications

Ammar Abdo, Maude Pupin
Turbo prediction: a new approach for bioactivity prediction. J. Comput. Aided Mol. Des. 36 (1) (2022)
Ammar Abdo, Maude Pupin
LINGO-DL: a text-based approach for molecular similarity searching. J. Comput. Aided Mol. Des. 35 (5) (2021)
Ammar Abdo, Eissa Ghaleb, Naser K. A. Alajmi, Maude Pupin
Monomer structure fingerprints: an extension of the monomer composition version for peptide databases. J. Comput. Aided Mol. Des. 34 (11) (2020)
Loïc Meunier, Pierre Tocquin, Luc Cornet, Damien Sirjacobs, Valérie Leclère, Maude Pupin, Philippe Jacques, Denis Baurain
Palantir: a springboard for the analysis of secondary metabolite gene clusters in large-scale genome mining projects. Bioinform. 36 (15) (2020)
Areski Flissi, Emma Ricart, Clémentine Campart, Mickael Chevalier, Yoann Dufresne, Juraj Michalik, Philippe Jacques, Christophe Flahaut, Frédérique Lisacek, Valérie Leclère, Maude Pupin
Norine: update of the nonribosomal peptide resource. Nucleic Acids Res. 48 (Database-Issue) (2020)
Emma Ricart, Valérie Leclère, Areski Flissi, Markus Müller, Maude Pupin, Frédérique Lisacek
rBAN: retro-biosynthetic analysis of nonribosomal peptides. J. Cheminformatics 11 (1) (2019)
Areski Flissi, Yoann Dufresne, Juraj Michalik, Laurie Tonon, Stéphane Janot, Laurent Noé, Philippe Jacques, Valérie Leclère, Maude Pupin
Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing. Nucleic Acids Res. 44 (Database-Issue) (2016)
Yoann Dufresne, Laurent Noé, Valérie Leclère, Maude Pupin
Smiles2Monomers: a link between chemical and biological structures for polymers. J. Cheminformatics 7 (2015)
Ammar Abdo, Valérie Leclère, Philippe Jacques, Naomie Salim, Maude Pupin
Prediction of New Bioactive Molecules using a Bayesian Belief Network. J. Chem. Inf. Model. 54 (1) (2014)
Ammar Abdo, Ségolène Caboche, Valérie Leclère, Philippe Jacques, Maude Pupin
A new fingerprint to predict nonribosomal peptides activity. J. Comput. Aided Mol. Des. 26 (10) (2012)
Ségolène Caboche, Maude Pupin, Valérie Leclère, Arnaud Fontaine, Philippe Jacques, Gregory Kucherov
NORINE: a database of nonribosomal peptides. Nucleic Acids Res. 36 (Database-Issue) (2008)
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Zhang, Alexander Grossmann, Claudine Devauchelle, Ivan Laprevotte
Comparing sequences without using alignments: application to HIV/SIV subtyping. BMC Bioinform. 8 (2007)
Gilles Didier, Ivan Laprevotte, Maude Pupin, Alain Hénaut
Local Decoding of Sequences and Alignment-Free Comparison. J. Comput. Biol. 13 (8) (2006)