Probabilistic alignment of motifs with sequences.
Pedro GonnetFrédérique LisacekPublished in: Bioinform. (2002)
Keyphrases
- sequence alignment
- rna sequences
- biological sequences
- multiple sequence alignment
- binding sites
- probabilistic model
- bayesian networks
- global alignment
- dynamic time warping
- pairwise
- temporal patterns
- image alignment
- motif discovery
- secondary structure
- generative model
- data sets
- multiple alignment
- sequence analysis
- phylogenetic analysis
- recurring patterns
- rna secondary structures
- transcription factor binding sites
- long sequences
- hidden markov models
- uncertain data
- protein sequences
- smith waterman