Nicolas Salamin

Publication Activity (10 Years)

Years Active: 2012-2019
Publications (10 Years): 5

Top Topics

Phylogenetic Trees

Protein Coding Regions

Top Venues

Nucleic Acids Res.

Publications

Xavier Meyer, Linda Dib, Nicolas Salamin
CoevDB: a database of intramolecular coevolution among protein-coding genes of the bony vertebrates. Nucleic Acids Res. 47 (Database-Issue) (2019)
Linda Dib, Nicolas Salamin, David Gfeller
Polymorphic sites preferentially avoid co-evolving residues in MHC class I proteins. PLoS Comput. Biol. 14 (5) (2018)
Iakov I. Davydov, Marc Robinson-Rechavi, Nicolas Salamin
State aggregation for fast likelihood computations in molecular evolution. Bioinform. 33 (3) (2017)
Xavier Meyer, Bastien Chopard, Nicolas Salamin
Accelerating Bayesian inference for evolutionary biology models. Bioinform. 33 (5) (2017)
Xavier Meyer, Bastien Chopard, Nicolas Salamin
Scheduling Finite Difference Approximations for DAG-Modeled Large Scale Applications. PASC (2017)
Linda Dib, Xavier Meyer, Panu Artimo, Vassilios Ioannidis, Heinz Stockinger, Nicolas Salamin
Coev-web: a web platform designed to simulate and evaluate coevolving positions along a phylogenetic tree. BMC Bioinform. 16 (2015)
Mario Valle, Hannes Schabauer, Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Nicolas Salamin
Optimization strategies for fast detection of positive selection on phylogenetic trees. Bioinform. 30 (8) (2014)
Linda Dib, Daniele Silvestro, Nicolas Salamin
Evolutionary footprint of coevolving positions in genes. Bioinform. 30 (9) (2014)
Sébastien Moretti, Balazs Laurenczy, Walid H. Gharib, Briséïs Castella, Arnold Kuzniar, Hannes Schabauer, Romain A. Studer, Mario Valle, Nicolas Salamin, Heinz Stockinger, Marc Robinson-Rechavi
Selectome update: quality control and computational improvements to a database of positive selection. Nucleic Acids Res. 42 (Database-Issue) (2014)
Hannes Schabauer, Mario Valle, Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Ziheng Yang, Nicolas Salamin
SlimCodeML: An Optimized Version of CodeML for the Branch-Site Model. IPDPS Workshops (2012)
Sébastien Moretti, Riccardo Murri, Sergio Maffioletti, Arnold Kuzniar, Briséïs Castella, Nicolas Salamin, Marc Robinson-Rechavi, Heinz Stockinger
gcodeml: A Grid-enabled Tool for Detecting Positive Selection in Biological Evolution. HealthGrid (2012)
Sébastien Moretti, Riccardo Murri, Sergio Maffioletti, Arnold Kuzniar, Briséïs Castella, Nicolas Salamin, Marc Robinson-Rechavi, Heinz Stockinger
gcodeml: A Grid-enabled Tool for Detecting Positive Selection in Biological Evolution CoRR (2012)