Daniel Schober

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 5

Top Topics

Laboratory Setting

Top Venues

Publications

Daniel Schober, Ronja Güldenring, James Love, Lazaros Nalpantidis
Vision-based robot manipulation of transparent liquid containers in a laboratory setting. CoRR (2024)
Carole A. Goble, Sarah Cohen-Boulakia, Stian Soiland-Reyes, Daniel Garijo, Yolanda Gil, Michael R. Crusoe, Kristian Peters, Daniel Schober
FAIR Computational Workflows. Data Intell. 2 (1-2) (2020)
Payam Emami Khoonsari, Pablo Moreno, Sven Bergmann, Joachim Burman, Marco Capuccini, Matteo Carone, Marta Cascante, Pedro de Atauri, Carles Foguet, Alejandra N. González-Beltrán, Thomas Hankemeier, Kenneth Haug, Sijin He, Stephanie Herman, David Johnson, Namrata Kale, Anders Larsson, Steffen Neumann, Kristian Peters, Luca Pireddu, Philippe Rocca-Serra, Pierrick Roger, Rico Rueedi, Christoph Ruttkies, Noureddin Sadawi, Reza M. Salek, Susanna-Assunta Sansone, Daniel Schober, Vitaly A. Selivanov, Etienne A. Thévenot, Michael van Vliet, Gianluigi Zanetti, Christoph Steinbeck, Kim Kultima, Ola Spjuth
Interoperable and scalable data analysis with microservices: applications in metabolomics. Bioinform. 35 (19) (2019)
Merlijn N. van Rijswijk, Charlie Beirnaert, Christophe Caron, Marta Cascante, Victoria Dominguez Del Angel, Warwick B. Dunn, Timothy M. D. Ebbels, Franck Giacomoni, Alejandra N. González-Beltrán, Thomas Hankemeier, Kenneth Haug, Jose L. Izquierdo-García, Rafael C. Jimenez, Fabien Jourdan, Namrata Kale, Maria I. Klapa, Oliver Kohlbacher, Kairi Koort, Kim Kultima, Gildas Le Corguillé, Nicholas K. Moschonas, Steffen Neumann, Claire O'Donovan, Martin Reczko, Philippe Rocca-Serra, Antonio Rosato, Reza M. Salek, Susanna-Assunta Sansone, Venkata P. Satagopam, Daniel Schober, Ruth Shimmo, Rachel A. Spicer, Ola Spjuth, Etienne A. Thévenot, Mark R. Viant, Ralf J. M. Weber, Egon L. Willighagen, Gianluigi Zanetti, Christoph Steinbeck
The future of metabolomics in ELIXIR. F1000Research 6 (2017)
Daniel Schober, Reza M. Salek, Steffen Neumann
Towards standardized evidence descriptors for metabolite annotations. ODLS (2016)
Daniel Schober, Rémy Choquet, Kristof Depraetere, Frank Enders, Philipp Daumke, Marie-Christine Jaulent, Douglas Teodoro, Emilie Pasche, Christian Lovis, Martin Boeker
DebugIT: Ontology-mediated Layered Data Integration for Real-time Antibiotics Resistance Surveillance. SWAT4LS (2014)
Martin Boeker, Niels Grewe, Johannes Röhl, Daniel Schober, Stefan Schulz, Djamila Seddig-Raufie, Ludger Jansen
Measuring the Effect of a Guideline-based Training on Ontology Design with a Competency Questions based Evaluation Approach. GI-Jahrestagung (2013)
Daniel Schober, Gerhard Mayer, Annick Moing, Martin Eisenacher, Steffen Neumann
Ontological analysis of controlled vocabularies used in PSI/MSI supported XML standards. GI-Jahrestagung (2013)
Filipe Santana, Fred Freitas, Roberta Fernandes, Zulma Medeiros, Daniel Schober
Towards an ontological representation of morbidity and mortality in Description Logics. J. Biomed. Semant. 3 (S-2) (2012)
Djamila Seddig-Raufie, Ludger Jansen, Daniel Schober, Martin Boeker, Niels Grewe, Stefan Schulz
Proposed actions are no actions: re-modeling an ontology design pattern with a realist top-level ontology. J. Biomed. Semant. 3 (S-2) (2012)
Daniel Schober, Vojtech Svátek, Martin Boeker
Checking Class Labels against Naming Conventions: First experiences with the OntoCheck Protégé plugin. ICBO (2012)
Daniel Schober, Ilinca Tudose, Vojtech Svátek, Martin Boeker
OntoCheck: verifying ontology naming conventions and metadata completeness in Protégé 4. J. Biomed. Semant. 3 (S-2) (2012)
Martin Boeker, Daniel Schober, Djamila Raufie, Niels Grewe, Johannes Röhl, Ludger Jansen, Stefan Schulz
Teaching Good Biomedical Ontology Design. ICBO (2012)
Filipe Santana, Daniel Schober, Zulma Medeiros, Fred Freitas, Stefan Schulz
Ontology patterns for tabular representations of biomedical knowledge on neglected tropical diseases. Bioinform. 27 (13) (2011)
Mélanie Courtot, Frank Gibson, Allyson L. Lister, James Malone, Daniel Schober, Ryan Remy Brinkman, Alan Ruttenberg
MIREOT: The minimum information to reference an external ontology term. Appl. Ontology 6 (1) (2011)
Philippe Rocca-Serra, Alan Ruttenberg, Martin J. O'Connor, Patricia L. Whetzel, Daniel Schober, Jay Greenbaum, Mélanie Courtot, Ryan Remy Brinkman, Susanna-Assunta Sansone, Richard H. Scheuermann, Bjoern Peters
Overcoming the ontology enrichment bottleneck with Quick Term Templates. Appl. Ontology 6 (1) (2011)
Douglas Teodoro, Rémy Choquet, Daniel Schober, Giovanni Mels, Emilie Pasche, Patrick Ruch, Christian Lovis
Interoperability Driven Integration of Biomedical Data Sources. MIE (2011)
Martin Boeker, Ilinca Tudose, Janna Hastings, Daniel Schober, Stefan Schulz
Unintended consequences of existential quantifications in biomedical ontologies. BMC Bioinform. 12 (2011)
Martin Boeker, Janna Hastings, Daniel Schober, Stefan Schulz
A T-Box Generator for Testing Scalability of OWL Mereotopological Patterns. OWLED (2011)
Daniel Schober, Martin Boeker, Jessica Bullenkamp, Csaba Huszka, Kristof Depraetere, Douglas Teodoro, Nadia Nadah, Rémy Choquet, Christel Daniel, Stefan Schulz
The DebugIT Core Ontology: semantic integration of antibiotics resistance patterns. MedInfo (2010)
David Ouagne, Nadia Nadah, Daniel Schober, Rémy Choquet, Douglas Teodoro, Dirk Colaert, Stefan Schulz, Marie-Christine Jaulent, Christel Daniel
Ensuring HL7-based information model requirements within an ontology framework. MedInfo (2010)
Stefan Schulz, Daniel Schober, Christel Daniel, Marie-Christine Jaulent
Bridging the semantics gap between terminologies, ontologies, and information models. MedInfo (2010)
Daniel Schober, Martin Boeker, Stefan Schulz, Ilinca Tudose
Developing DCO: The DebugIT core ontology for antibiotics resistence modelling. Semantic Mining in Biomedicine (2010)
Daniel Schober, Barry Smith, Suzanna E. Lewis, Waclaw Kusnierczyk, Jane Lomax, Chris Mungall, Chris F. Taylor, Philippe Rocca-Serra, Susanna-Assunta Sansone
Survey-based naming conventions for use in OBO Foundry ontology development. BMC Bioinform. 10 (2009)
Mélanie Courtot, William J. Bug, Frank Gibson, Allyson L. Lister, James Malone, Daniel Schober, Ryan Remy Brinkman, Alan Ruttenberg
The OWL of Biomedical Investigations. OWLED (2008)
Irena Spasic, Daniel Schober, Susanna-Assunta Sansone, Dietrich Rebholz-Schuhmann, Douglas B. Kell, Norman W. Paton
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining. BMC Bioinform. 9 (S-5) (2008)
Barry Smith, Waclaw Kusnierczyk, Daniel Schober, Werner Ceusters
Towards a Reference Terminology for Ontology Research and Development in the Biomedical Domain. KR-MED (2006)
Daniel Schober, Ulf Leser, Martin Zenke, Jens G. Reich
GandrKB--ontological microarray annotation and visualization. Bioinform. 21 (11) (2005)