Justin Zobel

ORCID

Publication Activity (10 Years)

Years Active: 1987-2024
Publications (10 Years): 45

Top Venues

Publications

Peaker Guo, Patrick Eades, Anthony Wirth, Justin Zobel
Exploiting New Properties of String Net Frequency for Efficient Computation. CoRR (2024)
Lida Rashidi, Justin Zobel, Alistair Moffat
The Impact of Judgment Variability on the Consistency of Offline Effectiveness Measures. ACM Trans. Inf. Syst. 42 (1) (2024)
Lida Rashidi, Justin Zobel, Alistair Moffat
Query Variability and Experimental Consistency: A Concerning Case Study. ICTIR (2024)
Peaker Guo, Patrick Eades, Anthony Wirth, Justin Zobel
Exploiting New Properties of String Net Frequency for Efficient Computation. CPM (2024)
Meng Yuan, Pauline Lin, Lida Rashidi, Justin Zobel
Assessment of the Quality of Topic Models for Information Retrieval Applications. ICTIR (2023)
Christine Bauer, Ben Carterette, Nicola Ferro, Norbert Fuhr, Joeran Beel, Timo Breuer, Charles L. A. Clarke, Anita Crescenzi, Gianluca Demartini, Giorgio Maria Di Nunzio, Laura Dietz, Guglielmo Faggioli, Bruce Ferwerda, Maik Fröbe, Matthias Hagen, Allan Hanbury, Claudia Hauff, Dietmar Jannach, Noriko Kando, Evangelos Kanoulas, Bart P. Knijnenburg, Udo Kruschwitz, Meijie Li, Maria Maistro, Lien Michiels, Andrea Papenmeier, Martin Potthast, Paolo Rosso, Alan Said, Philipp Schaer, Christin Seifert, Damiano Spina, Benno Stein, Nava Tintarev, Julián Urbano, Henning Wachsmuth, Martijn C. Willemsen, Justin Zobel
Report on the Dagstuhl Seminar on Frontiers of Information Access Experimentation for Research and Education. SIGIR Forum 57 (1) (2023)
Justin Zobel
When Measurement Misleads: The Limits of Batch Assessment of Retrieval Systems. SIGIR Forum 56 (1) (2022)
Meng Yuan, Justin Zobel, Pauline Lin
Measurement of clustering effectiveness for document collections. Inf. Retr. J. 25 (3) (2022)
Benjamin Goudey, Nicholas Geard, Karin Verspoor, Justin Zobel
Propagation, detection and correction of errors using the sequence database network. Briefings Bioinform. 23 (6) (2022)
Patrick Eades, Anthony Wirth, Justin Zobel
Immediate Text Search on Streams Using Apoptosic Indexes. ECIR (1) (2022)
Meng Yuan, Pauline Lin, Justin Zobel
Document Clustering vs Topic Models: A Case Study. ADCS (2021)
Jiyu Chen, Nicholas Geard, Justin Zobel, Karin Verspoor
Automatic consistency assurance for literature-based gene ontology annotation. BMC Bioinform. 22 (1) (2021)
Lida Rashidi, Justin Zobel, Alistair Moffat
Evaluating the Predictivity of IR Experiments. SIGIR (2021)
Unni Krishnan, Alistair Moffat, Justin Zobel, Bodo Billerbeck
Generation of Synthetic Query Auto Completion Logs. ECIR (1) (2020)
William L. Holland, Anthony Wirth, Justin Zobel
Recency Queries with Succinct Representation. ISAAC (2020)
Qingyu Chen, Ramona Britto, Ivan Erill, Constance J. Jeffery, Arthur Liberzon, Michele Magrane, Jun-ichi Onami, Marc Robinson-Rechavi, Jana Sponarova, Justin Zobel, Karin Verspoor
Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases. Genom. Proteom. Bioinform. 18 (2) (2020)
Justin Zobel, Lida Rashidi
Corpus Bootstrapping for Assessment of the Properties of Effectiveness Measures. CIKM (2020)
Bodo Billerbeck, Justin Zobel, Nicholas Lester, Nick Craswell
Scalable Methods for Calculating Term Co-Occurrence Frequencies. CoRR (2020)
Qingyu Chen, Xiuzhen Zhang, Yu Wan, Justin Zobel, Karin Verspoor
Search Effectiveness in Nonredundant Sequence Databases: Assessments and Solutions. J. Comput. Biol. 26 (6) (2019)
Alfan Farizki Wicaksono, Alistair Moffat, Justin Zobel
Modeling User Actions in Job Search. ECIR (1) (2019)
Unni Krishnan, Bodo Billerbeck, Alistair Moffat, Justin Zobel
Abstraction of query auto completion logs for anonymity-preserving analysis. Inf. Retr. J. 22 (5) (2019)
Ziad Al Bkhetan, Justin Zobel, Adam Kowalczyk, Karin Verspoor, Benjamin Goudey
Exploring effective approaches for haplotype block phasing. BMC Bioinform. 20 (1) (2019)
Mohamed Reda Bouadjenek, Justin Zobel, Karin Verspoor
Automated assessment of biological database assertions using the scientific literature. BMC Bioinform. 20 (1) (2019)
Damiano Spina, Maria Maistro, Yongli Ren, Sargol Sadeghi, Wilson Wong, Timothy Baldwin, Lawrence Cavedon, Alistair Moffat, Mark Sanderson, Falk Scholer, Justin Zobel
A Preliminary Comparison of Job, Talent, and Web Search. IIR (2018)
Qingyu Chen, Yu Wan, Xiuzhen Zhang, Yang Lei, Justin Zobel, Karin Verspoor
Comparative Analysis of Sequence Clustering Methods for Deduplication of Biological Databases. ACM J. Data Inf. Qual. 9 (3) (2018)
Bahar Salehi, Damiano Spina, Alistair Moffat, Sargol Sadeghi, Falk Scholer, Timothy Baldwin, Lawrence Cavedon, Mark Sanderson, Wilson Wong, Justin Zobel
A Living Lab Study of Query Amendment in Job Search. SIGIR (2018)
Nicola Ferro, Norbert Fuhr, Gregory Grefenstette, Joseph A. Konstan, Pablo Castells, Elizabeth M. Daly, Thierry Declerck, Michael D. Ekstrand, Werner Geyer, Julio Gonzalo, Tsvi Kuflik, Krister Lindén, Bernardo Magnini, Jian-Yun Nie, Raffaele Perego, Bracha Shapira, Ian Soboroff, Nava Tintarev, Karin Verspoor, Martijn C. Willemsen, Justin Zobel
The Dagstuhl Perspectives Workshop on Performance Modeling and Prediction. SIGIR Forum 52 (1) (2018)
Nicola Ferro, Norbert Fuhr, Gregory Grefenstette, Joseph A. Konstan, Pablo Castells, Elizabeth M. Daly, Thierry Declerck, Michael D. Ekstrand, Werner Geyer, Julio Gonzalo, Tsvi Kuflik, Krister Lindén, Bernardo Magnini, Jian-Yun Nie, Raffaele Perego, Bracha Shapira, Ian Soboroff, Nava Tintarev, Karin Verspoor, Martijn C. Willemsen, Justin Zobel
From Evaluating to Forecasting Performance: How to Turn Information Retrieval, Natural Language Processing and Recommender Systems into Predictive Sciences (Dagstuhl Perspectives Workshop 17442). Dagstuhl Manifestos 7 (1) (2018)
Mohamed Reda Bouadjenek, Karin Verspoor, Justin Zobel
Automated detection of records in biological sequence databases that are inconsistent with the literature. J. Biomed. Informatics 71 (2017)
Damiano Spina, Maria Maistro, Yongli Ren, Sargol Sadeghi, Wilson Wong, Timothy Baldwin, Lawrence Cavedon, Alistair Moffat, Mark Sanderson, Falk Scholer, Justin Zobel
Understanding User Behavior in Job and Talent Search: An Initial Investigation. eCOM@SIGIR (2017)
Kevin Fray, Kerri Morgan, Anthony Wirth, Justin Zobel
Practical adaptive search trees with performance bounds. ACSW (2017)
James Allan, Nicholas J. Belkin, Paul N. Bennett, Jamie Callan, Charles L. A. Clarke, Fernando Diaz, Susan T. Dumais, Nicola Ferro, Donna Harman, Djoerd Hiemstra, Ian Ruthven, Tetsuya Sakai, Mark D. Smucker, Justin Zobel
Overview of Special Issue. SIGIR Forum 51 (2) (2017)
Qingyu Chen, Justin Zobel, Karin Verspoor
Duplicates, redundancies and inconsistencies in the primary nucleotide databases: a descriptive study. Database J. Biol. Databases Curation 2017 (2017)
Mohamed Reda Bouadjenek, Karin Verspoor, Justin Zobel
Learning Biological Sequence Types Using the Literature. CIKM (2017)
Yvette Graham, Timothy Baldwin, Alistair Moffat, Justin Zobel
Can machine translation systems be evaluated by the crowd alone. Nat. Lang. Eng. 23 (1) (2017)
Mohamed Reda Bouadjenek, Karin Verspoor, Justin Zobel
Literature consistency of bioinformatics sequence databases is effective for assessing record quality. Database J. Biol. Databases Curation 2017 (2017)
Justin Zobel
What We Talk About When We Talk About Information Retrieval. SIGIR Forum 51 (3) (2017)
Unni Krishnan, Alistair Moffat, Justin Zobel
A Taxonomy of Query Auto Completion Modes. ADCS (2017)
Qingyu Chen, Xiuzhen Zhang, Yu Wan, Justin Zobel, Karin Verspoor
Sequence Clustering Methods and Completeness of Biological Database Search. BAI@IJCAI (2017)
Qingyu Chen, Yu Wan, Yang Lei, Justin Zobel, Karin Verspoor
Evaluation of CD-HIT for constructing non-redundant databases. BIBM (2016)
Lorraine Goeuriot, Gareth J. F. Jones, Liadh Kelly, Henning Müller, Justin Zobel
Medical information retrieval: introduction to the special issue. Inf. Retr. J. 19 (1-2) (2016)
Miji Choi, Justin Zobel, Karin Verspoor
A categorical analysis of coreference resolution errors in biomedical texts. J. Biomed. Informatics 60 (2016)
Rodney McDonell, Justin Zobel, Bodo Billerbeck
How Informative is a Term?: Dispersion as a measure of Term Specificity. SIGIR (2016)
Miji Choi, Haibin Liu, William A. Baumgartner Jr., Justin Zobel, Karin Verspoor
Coreference resolution improves extraction of Biological Expression Language statements from texts. Database J. Biol. Databases Curation 2016 (2016)
Nicola Ferro, Norbert Fuhr, Kalervo Järvelin, Noriko Kando, Matthias Lippold, Justin Zobel
Increasing Reproducibility in IR: Findings from the Dagstuhl Seminar on "Reproducibility of Data-Oriented Experiments in e-Science". SIGIR Forum 50 (1) (2016)
Justin Zobel
Beyond The Thesis: Completing A Successful PhD. PIKM@CIKM (2015)
Benjamin Goudey, Mani Abedini, John L. Hopper, Michael Inouye, Enes Makalic, Daniel F. Schmidt, John Wagner, Zeyu Zhou, Justin Zobel, Matthias Reumann
High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies. Health Inf. Sci. Syst. 3 (1) (2015)
Qingyu Chen, Justin Zobel, Karin Verspoor
Evaluation of a Machine Learning Duplicate Detection Method for Bioinformatics Databases. DTMBIO@CIKM (2015)
Ryan R. Wick, Mark B. Schultz, Justin Zobel, Kathryn E. Holt
genome assemblies. Bioinform. 31 (20) (2015)
Jiancong Tong, Anthony Wirth, Justin Zobel
Compact Auxiliary Dictionaries for Incremental Compression of Large Repositories. CIKM (2014)
Jiancong Tong, Anthony Wirth, Justin Zobel
Principled dictionary pruning for low-memory corpus compression. SIGIR (2014)
Angelos Molfetas, Anthony Wirth, Justin Zobel
Scalability in Recursively Stored Delta Compressed Collections of Files. AWC (2014)
Angelos Molfetas, Anthony Wirth, Justin Zobel
Storing a Collection of Differentially Compressed Files Recursively. BigData Congress (2014)
Lorraine Goeuriot, Gareth J. F. Jones, Liadh Kelly, Henning Müller, Justin Zobel
MedIR14: medical information retrieval workshop. SIGIR (2014)
Yvette Graham, Timothy Baldwin, Alistair Moffat, Justin Zobel
Is Machine Translation Getting Better over Time? EACL (2014)
Lorraine Goeuriot, Liadh Kelly, Gareth J. F. Jones, Henning Müller, Justin Zobel
Report on the SIGIR 2014 Workshop on Medical Information Retrieval (MedIR). SIGIR Forum 48 (2) (2014)
Jiancong Tong, Anthony Wirth, Justin Zobel
Blended Dictionaries for Reduced-Memory Lempel-Ziv Corpus Compression. ADCS (2014)
Miji Choi, Karin Verspoor, Justin Zobel
Analysis of Coreference Relations in the Biomedical Literature. ALTA (2014)
Lorraine Goeuriot, Liadh Kelly, Gareth J. F. Jones, Henning Müller, Justin Zobel
Report on the SIGIR 2014 Workshop on Medical Information Retrieval (MedIR). MedIR@SIGIR (2014)
Miji Choi, Karin Verspoor, Justin Zobel
Evaluation of Coreference Resolution for Biomedical Text. MedIR@SIGIR (2014)
Angelos Molfetas, Anthony Wirth, Justin Zobel
Using Inter-file Similarity to Improve Intra-file Compression. BigData Congress (2014)
Yvette Graham, Timothy Baldwin, Alistair Moffat, Justin Zobel
Crowd-Sourcing of Human Judgments of Machine Translation Fluency. ALTA (2013)
Yvette Graham, Timothy Baldwin, Alistair Moffat, Justin Zobel
Continuous Measurement Scales in Human Evaluation of Machine Translation. LAW@ACL (2013)
Stefan Pohl, Alistair Moffat, Justin Zobel
Efficient Extended Boolean Retrieval. IEEE Trans. Knowl. Data Eng. 24 (6) (2012)
Thomas C. Conway, Jeremy Wazny, Andrew J. Bromage, Justin Zobel, Bryan Beresford-Smith
assembler. Bioinform. 28 (14) (2012)
Sarvnaz Karimi, Justin Zobel, Falk Scholer
Quantifying the impact of concept recognition on biomedical information retrieval. Inf. Process. Manag. 48 (1) (2012)
Gad Abraham, Adam Kowalczyk, Justin Zobel, Michael Inouye
SparSNP: Fast and memory-efficient analysis of all SNPs for phenotype prediction. BMC Bioinform. 13 (2012)
Yvette Graham, Timothy Baldwin, Aaron Harwood, Alistair Moffat, Justin Zobel
Measurement of Progress in Machine Translation. ALTA (2012)
Matthias Reumann, Enes Makalic, Benjamin W. Goudey, Michael Inouye, Adrian Bickerstaffe, Minh Bui, Daniel J. Park, Miroslaw K. Kapuscinski, Daniel F. Schmidt, Zeyu Zhou, Guoqi Q. Qian, Justin Zobel, John Wagner, John L. Hopper
Supercomputing enabling exhaustive statistical analysis of genome wide association study data: Preliminary results. EMBC (2012)
Shanika Kuruppu, Bryan Beresford-Smith, Thomas C. Conway, Justin Zobel
Iterative Dictionary Construction for Compression of Large DNA Data Sets. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (1) (2012)
Justin Zobel, William Webber, Mark Sanderson, Alistair Moffat
Principles for robust evaluation infrastructure. DESIRE@CIKM (2011)
Justin Zobel
Data, health, and algorithmics: computational challenges for biomedicine. CIKM (2011)
Christopher Hoobin, Simon J. Puglisi, Justin Zobel
Relative Lempel-Ziv Factorization for Efficient Storage and Retrieval of Web Collections. Proc. VLDB Endow. 5 (3) (2011)
Christopher Hoobin, Simon J. Puglisi, Justin Zobel
Sample selection for dictionary-based corpus compression. SIGIR (2011)
Christopher Hoobin, Simon J. Puglisi, Justin Zobel
Relative Lempel-Ziv Factorization for Efficient Storage and Retrieval of Web Collections CoRR (2011)
Andrew Peel, Anthony Wirth, Justin Zobel
Collection-based compression using discovered long matching strings. CIKM (2011)
Shanika Kuruppu, Simon J. Puglisi, Justin Zobel
Optimized Relative Lempel-Ziv Compression of Genomes. ACSC (2011)
Shanika Kuruppu, Simon J. Puglisi, Justin Zobel
Reference Sequence Construction for Relative Compression of Genomes CoRR (2011)
Shanika Kuruppu, Simon J. Puglisi, Justin Zobel
Reference Sequence Construction for Relative Compression of Genomes. SPIRE (2011)
William Webber, Alistair Moffat, Justin Zobel
A similarity measure for indefinite rankings. ACM Trans. Inf. Syst. 28 (4) (2010)
Shanika Kuruppu, Simon J. Puglisi, Justin Zobel
Relative Lempel-Ziv Compression of Genomes for Large-Scale Storage and Retrieval. SPIRE (2010)
William Webber, Alistair Moffat, Justin Zobel
The Effect of Pooling and Evaluation Depth on Metric Stability. EVIA@NTCIR (2010)
Gad Abraham, Adam Kowalczyk, Sherene Loi, Izhak Haviv, Justin Zobel
Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context. BMC Bioinform. 11 (2010)
Nikolas Askitis, Justin Zobel
Redesigning the string hash table, burst trie, and BST to exploit cache. ACM J. Exp. Algorithmics 15 (2010)
David Newman, Timothy Baldwin, Lawrence Cavedon, Eric Huang, Sarvnaz Karimi, David Martínez, Falk Scholer, Justin Zobel
Visualizing search results and document collections using topic maps. J. Web Semant. 8 (2-3) (2010)
Arun Siddharth Konagurthu, Lloyd Allison, Thomas C. Conway, Bryan Beresford-Smith, Justin Zobel
Design of an Efficient Out-of-Core Read Alignment Algorithm. WABI (2010)
Stefan Pohl, Justin Zobel, Alistair Moffat
Extended Boolean retrieval for systematic biomedical reviews. ACSC (2010)
Sarvnaz Karimi, Stefan Pohl, Falk Scholer, Lawrence Cavedon, Justin Zobel
Boolean versus ranked querying for biomedical systematic reviews. BMC Medical Informatics Decis. Mak. 10 (2010)
Milad Shokouhi, Justin Zobel
Robust result merging using sample-based score estimates. ACM Trans. Inf. Syst. 27 (3) (2009)
Nikolas Askitis, Justin Zobel
B-tries for disk-based string management. VLDB J. 18 (1) (2009)
Sarvnaz Karimi, Justin Zobel, Stefan Pohl, Falk Scholer
The challenge of high recall in biomedical systematic search. DTMBIO (2009)
Yohannes Tsegay, Simon J. Puglisi, Andrew Turpin, Justin Zobel
Document Compaction for Efficient Query Biased Snippet Generation. ECIR (2009)
Nicola Stokes, Yi Li, Lawrence Cavedon, Justin Zobel
Exploring criteria for successful query expansion in the genomic domain. Inf. Retr. 12 (1) (2009)
Justin Zobel, Alistair Moffat, Laurence Anthony F. Park
Against recall: is it persistence, cardinality, density, coverage, or totality? SIGIR Forum 43 (1) (2009)
Timothy G. Armstrong, Alistair Moffat, William Webber, Justin Zobel
Has adhoc retrieval improved since 1994? SIGIR (2009)
Timothy G. Armstrong, Alistair Moffat, William Webber, Justin Zobel
EvaluatIR: an online tool for evaluating and comparing IR systems. SIGIR (2009)
Timothy G. Armstrong, Alistair Moffat, William Webber, Justin Zobel
Improvements that don't add up: ad-hoc retrieval results since 1998. CIKM (2009)
Mingfang Wu, Andrew Turpin, Justin Zobel
Aggregated click-through data in a homogeneous user community. SIGIR (2008)
William Webber, Alistair Moffat, Justin Zobel
Statistical power in retrieval experimentation. CIKM (2008)
Alistair Moffat, Justin Zobel
Rank-biased precision for measurement of retrieval effectiveness. ACM Trans. Inf. Syst. 27 (1) (2008)

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Publication Activity (10 Years)

Top Topics

Top Venues

Justin Zobel