Lloyd Allison

Publication Activity (10 Years)

Years Active: 1978-2024
Publications (10 Years): 22

Top Topics

Protein Structural

Statistical Models

Minimum Message Length

Top Venues

Publications

Lloyd Allison
Circular Programs and Self-Referential Structures. CoRR (2024)
Piyumi R. Amarasinghe, Lloyd Allison, Peter J. Stuckey, Maria Garcia de la Banda, Arthur M. Lesk, Arun Siddharth Konagurthu
Getting 'ϕψχal' with proteins: minimum message length inference of joint distributions of backbone and sidechain dihedral angles. Bioinform. 39 (Supplement-1) (2023)
Sandun Rajapaksa, Lloyd Allison, Peter J. Stuckey, Maria Garcia de la Banda, Arun Siddharth Konagurthu
The divergence time of protein structures modelled by Markov matrices and its relation to the divergence of sequences. CoRR (2023)
Lloyd Allison
Applications of Recursively Defined Data Structures. CoRR (2022)
Lloyd Allison
Subclasses of Class Function used to Implement Transformations of Statistical Models. CoRR (2022)
Lloyd Allison, Arun Siddharth Konagurthu, Daniel F. Schmidt
On Universal Codes for Integers: Wallace Tree, Elias Omega and Beyond. DCC (2021)
Yang Li, Kevin B. Korb, Lloyd Allison
Markov Blanket Discovery using Minimum Message Length. CoRR (2021)
Rodney T. O'Donnell, Kevin B. Korb, Lloyd Allison
Causal KL: Evaluating Causal Discovery. CoRR (2021)
Yang Li, Lloyd Allison, Kevin B. Korb
The difficulty of being moral. Theor. Comput. Sci. 885 (2021)
Sandun Rajapaksa, Dinithi Sumanaweera, Maria Garcia de la Banda, Peter J. Stuckey, David Abramson, Lloyd Allison, Arthur M. Lesk, Arun Siddharth Konagurthu
On identifying statistical redundancy at the level of amino acid subsequences. BIBM (2021)
Dinithi Sumanaweera, Lloyd Allison, Arun Siddharth Konagurthu
Bridging the Gaps in Statistical Models of Protein Alignment. CoRR (2020)
Lloyd Allison
On the complexity of graphs (networks) by information content, and conditional (mutual) information given other graphs. CoRR (2020)
Yang Li, Lloyd Allison, Kevin B. Korb
Proving the NP-completeness of optimal moral graph triangulation. CoRR (2019)
Lloyd Allison, Arun Siddharth Konagurthu, Daniel F. Schmidt
On Universal Codes for Integers: Wallace Tree, Elias Omega and Variations. CoRR (2019)
Dinithi Sumanaweera, Lloyd Allison, Arun Siddharth Konagurthu
Statistical compression of protein sequences and inference of marginal probability landscapes over competing alignments using finite state models and Dirichlet priors. Bioinform. 35 (14) (2019)
Yang Li, Kevin B. Korb, Lloyd Allison
The Complexity of Morality: Checking Markov Blanket Consistency with DAGs via Morality. CoRR (2019)
Dinithi Sumanaweera, Lloyd Allison, Arun Siddharth Konagurthu
The Bits Between Proteins. DCC (2018)
Ramanan Subramanian, Lloyd Allison, Peter J. Stuckey, Maria Garcia de la Banda, David Abramson, Arthur M. Lesk, Arun Siddharth Konagurthu
Statistical Compression of Protein Folding Patterns for Inference of Recurrent Substructural Themes. DCC (2017)
James H. Collier, Lloyd Allison, Arthur M. Lesk, Peter J. Stuckey, Maria Garcia de la Banda, Arun Siddharth Konagurthu
Statistical inference of protein structural alignments using information and compression. Bioinform. 33 (7) (2017)
Parthan Kasarapu, Lloyd Allison
Minimum message length estimation of mixtures of multivariate Gaussian and von Mises-Fisher distributions. Mach. Learn. 100 (2-3) (2015)
Parthan Kasarapu, Lloyd Allison
Minimum message length estimation of mixtures of multivariate Gaussian and von Mises-Fisher distributions. CoRR (2015)
Arun Siddharth Konagurthu, Parthan Kasarapu, Lloyd Allison, James H. Collier, Arthur M. Lesk
On Sufficient Statistics of Least-Squares Superposition of Vector Sets. J. Comput. Biol. 22 (6) (2015)
Arun Siddharth Konagurthu, Parthan Kasarapu, Lloyd Allison, James H. Collier, Arthur M. Lesk
On Sufficient Statistics of Least-Squares Superposition of Vector Sets. RECOMB (2014)
François Petitjean, Lloyd Allison, Geoffrey I. Webb
A Statistically Efficient and Scalable Method for Log-Linear Analysis of High-Dimensional Data. ICDM (2014)
James H. Collier, Lloyd Allison, Arthur M. Lesk, Maria Garcia de la Banda, Arun Siddharth Konagurthu
A new statistical framework to assess structural alignment quality using information compression. Bioinform. 30 (17) (2014)
Arun Siddharth Konagurthu, Lloyd Allison, David Abramson, Peter J. Stuckey, Arthur M. Lesk
Statistical Inference of Protein "LEGO Bricks". ICDM (2013)
Arun Siddharth Konagurthu, Arthur M. Lesk, Lloyd Allison
Minimum message length inference of secondary structure from protein coordinate data. Bioinform. 28 (12) (2012)
Arun Siddharth Konagurthu, Lloyd Allison, Peter J. Stuckey, Arthur M. Lesk
Piecewise linear approximation of protein structures using the principle of minimum message length. Bioinform. 27 (13) (2011)
Enes Makalic, Lloyd Allison
MMLD Inference of Multilayer Perceptrons. Algorithmic Probability and Friends (2011)
Arun Siddharth Konagurthu, Lloyd Allison, Thomas C. Conway, Bryan Beresford-Smith, Justin Zobel
Design of an Efficient Out-of-Core Read Alignment Algorithm. WABI (2010)
Minh Duc Cao, Trevor I. Dix, Lloyd Allison
A genome alignment algorithm based on compression. BMC Bioinform. 11 (2010)
Minh Duc Cao, Lloyd Allison, Trevor I. Dix
A Distance Measure for Genome Phylogenetic Analysis. Australasian Conference on Artificial Intelligence (2009)
Minh Duc Cao, Trevor I. Dix, Lloyd Allison
Computing Substitution Matrices for Genomic Comparative Analysis. PAKDD (2009)
Julie Bernal, Trevor I. Dix, Lloyd Allison, Angeline Bartholomeusz, Lilly Yuen
Modelling Hepatitis B Virus Antiviral Therapy and Drug Resistant Mutant Strains. ACAL (2009)
Trevor I. Dix, David R. Powell, Lloyd Allison, Julie Bernal, Samira Jaeger, Linda Stern
Comparative analysis of long DNA sequences by per element information content using different contexts. BMC Bioinform. 8 (S-2) (2007)
Minh Duc Cao, Trevor I. Dix, Lloyd Allison, Chris Mears
A Simple Statistical Algorithm for Biological Sequence Compression. DCC (2007)
Rodney T. O'Donnell, Lloyd Allison, Kevin B. Korb
Learning Hybrid Bayesian Networks by MML. Australian Conference on Artificial Intelligence (2006)
Lloyd Allison
A programming paradigm for machine learning, with a case study of Bayesian networks. ACSC (2006)
Lloyd Allison
Models for machine learning and data mining in functional programming. J. Funct. Program. 15 (1) (2005)
David R. Powell, Lloyd Allison, Trevor I. Dix
Modelling-Alignment for Non-random Sequences. Australian Conference on Artificial Intelligence (2004)
Lloyd Allison
Types and Classes of Machine Learning and Data Mining. ACSC (2003)
Leigh J. Fitzgibbon, Lloyd Allison, Joshua W. Comley
Probability Model Type Sufficiency. IDEAL (2003)
Joshua W. Comley, Lloyd Allison, Leigh J. Fitzgibbon
Flexible Decision Trees in a General Data-Mining Environment. IDEAL (2003)
Lloyd Allison
Longest Biased Interval and Longest Non-negative Sum Interval. Bioinform. 19 (10) (2003)
Leigh J. Fitzgibbon, David L. Dowe, Lloyd Allison
Univariate Polynomial Inference by Monte Carlo Message Length Approximation. ICML (2002)
Leigh J. Fitzgibbon, David L. Dowe, Lloyd Allison
Change-Point Estimation Using New Minimum Message Length Approximations. PRICAI (2002)
Lloyd Allison, Linda Stern, Timothy Edgoose, Trevor I. Dix
Sequence Complexity for Biological Sequence Analysis. Comput. Chem. 24 (1) (2000)
Leigh J. Fitzgibbon, Lloyd Allison, David L. Dowe
Minimum Message Length Grouping of Ordered Data. ALT (2000)
Lloyd Allison
Intelligent Systems in Molecular Biology (ISMB98), 27 June - 1 July, 1998, Montreal. Comput. Chem. 24 (1) (2000)
Lloyd Allison
Generator and Search Objects in Java. J. Res. Pract. Inf. Technol. 32 (1) (2000)
Lloyd Allison, David R. Powell, Trevor I. Dix
Compression and Approximate Matching. Comput. J. 42 (1) (1999)
Timothy Edgoose, Lloyd Allison
MML Markov classification of sequential data. Stat. Comput. 9 (4) (1999)
David R. Powell, Lloyd Allison, Trevor I. Dix
A Versatile Divide and Conquer Technique for Optimal String Alignment. Inf. Process. Lett. 70 (3) (1999)
Glen Pringle, Lloyd Allison, David L. Dowe
What is a Tall Poppy Among Web Pages? Comput. Networks 30 (1-7) (1998)
Timothy Edgoose, Lloyd Allison
Minimum Message Length Hidden Markov Modelling. Data Compression Conference (1998)
David L. Dowe, Lloyd Allison, Glen Pringle
The Hunter and the Hunted - Modelling the Relationship Between Web Pages and Search Engines. PAKDD (1998)
David R. Powell, Lloyd Allison, Trevor I. Dix, David L. Dowe
Alignment of Low Information Sequences. CATS (1998)
Lloyd Allison, Timothy Edgoose, Trevor I. Dix
Compression of Strings with Approximate Repeats. ISMB (1998)
Toni Kazic, David J. States, Lloyd Allison
Motifs in Biology: Analysis of Ambiguous Data: Introduction. HICSS (5) (1994)
Lloyd Allison
Using Hirschberg's Algorithm to Generate Random Alignments of Strings. Inf. Process. Lett. 51 (5) (1994)
Chut N. Yee, Lloyd Allison
Reconstruction of strings past. Comput. Appl. Biosci. 9 (1) (1993)
Lloyd Allison
Applications of Recursively Defined Data Structures. Aust. Comput. J. 25 (1) (1993)
Alan Finlay, Lloyd Allison
A Correction to the Denotational Semantics for the Prolog of Nicholson and Foo. ACM Trans. Program. Lang. Syst. 15 (1) (1993)
Lloyd Allison
Lazy Dynamic-Programming Can Be Eager. Inf. Process. Lett. 43 (4) (1992)
Lloyd Allison, Trevor I. Dix, Chut N. Yee
Shortest Path and Closure Algorithms for Banded Matrices. Inf. Process. Lett. 40 (6) (1991)
Lloyd Allison
Continuations Implement Generators and Streams. Comput. J. 33 (5) (1990)
S. T. Ho, Lloyd Allison, Chut N. Yee
Restriction site mapping for three or more enzymes. Comput. Appl. Biosci. 6 (3) (1990)
Lloyd Allison
Direct Semantics and Exceptions Define Jumps and Coroutines. Inf. Process. Lett. 31 (6) (1989)
C. McDonald, Lloyd Allison
Denotational Semantics of a Command Interpreter and Their Implementation in Standard ML. Comput. J. 32 (5) (1989)
Lloyd Allison
Circular Programs and Self-referential Structures. Softw. Pract. Exp. 19 (2) (1989)
Lloyd Allison
Some Applications of Continuations. Comput. J. 31 (1) (1988)
Lloyd Allison, Chut N. Yee
Restriction site mapping is in separation theory. Comput. Appl. Biosci. 4 (1) (1988)
Lloyd Allison, Trevor I. Dix
A Bit-String Longest-Common-Subsequence Algorithm. Inf. Process. Lett. 23 (6) (1986)
Lloyd Allison
Programming Denotational Semantics II. Comput. J. 28 (5) (1985)
Lloyd Allison
Programming Denotational Semantics. Comput. J. 26 (2) (1983)
Lloyd Allison
Stable Marriages by Coroutines. Inf. Process. Lett. 16 (2) (1983)
Lloyd Allison
Syntax Directed Program Editing. Softw. Pract. Exp. 13 (5) (1983)
Lloyd Allison
Generating Coset Representatives for Permutation Groups. J. Algorithms 2 (3) (1981)
Lloyd Allison
Phrase Structures, Non-Determinism and Backtracking. Inf. Process. Lett. 7 (3) (1978)
Lloyd Allison
On nondeterministic control structures. ACM SIGPLAN Notices 13 (7) (1978)