Design of an Efficient Out-of-Core Read Alignment Algorithm.
Arun Siddharth KonagurthuLloyd AllisonThomas C. ConwayBryan Beresford-SmithJustin ZobelPublished in: WABI (2010)
Keyphrases
- improved algorithm
- computational complexity
- times faster
- preprocessing
- np hard
- learning algorithm
- recognition algorithm
- classification algorithm
- optimization algorithm
- high accuracy
- cost function
- experimental evaluation
- detection algorithm
- worst case
- probabilistic model
- data sets
- reinforcement learning
- case study
- motion estimation
- significant improvement
- computationally efficient
- theoretical analysis
- user interface
- optimal solution
- objective function
- bayesian networks
- memory efficient