Getting 'ϕψχal' with proteins: minimum message length inference of joint distributions of backbone and sidechain dihedral angles.
Piyumi R. AmarasingheLloyd AllisonPeter J. StuckeyMaria Garcia de la BandaArthur M. LeskArun Siddharth KonagurthuPublished in: Bioinform. (2023)
Keyphrases
- minimum message length
- joint distribution
- protein backbone
- protein structure
- finite mixtures
- unsupervised learning
- maximum entropy
- random variables
- conditional probabilities
- marginal distributions
- secondary structure
- expectation maximization
- probabilistic inference
- bayesian networks
- factor graphs
- protein sequences
- probability distribution
- random fields
- protein protein interactions
- computer vision
- machine learning
- em algorithm
- active learning
- pattern recognition
- amino acids
- approximate inference
- training examples
- image processing