Ryan R. Wick

Publication Activity (10 Years)

Years Active: 2015-2023
Publications (10 Years): 5

Top Topics

Reference Genome

Convolutional Neural Networks

High Throughput Sequencing

Top Venues

PLoS Comput. Biol.

J. Open Source Softw.

Publications

Ryan R. Wick, Louise M. Judd, Kathryn E. Holt
Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing. PLoS Comput. Biol. 19 (3) (2023)
Ryan R. Wick, Kathryn E. Holt
Polypolish: Short-read polishing of long-read bacterial genome assemblies. PLoS Comput. Biol. 18 (1) (2022)
Ryan R. Wick
Badread: simulation of error-prone long reads. J. Open Source Softw. 4 (36) (2019)
Ryan R. Wick, Louise M. Judd, Kathryn E. Holt
Deepbinner: Demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks. PLoS Comput. Biol. 14 (11) (2018)
Ryan R. Wick, Louise M. Judd, Claire L. Gorrie, Kathryn E. Holt
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads. PLoS Comput. Biol. 13 (6) (2017)
Ryan R. Wick, Mark B. Schultz, Justin Zobel, Kathryn E. Holt
genome assemblies. Bioinform. 31 (20) (2015)