David Campos

Publication Activity (10 Years)

Years Active: 2009-2019
Publications (10 Years): 7

Top Topics

Processing Pipeline

Scientific Documents

Top Venues

Database J. Biol. Databases Curation

J. Cheminformatics

Publications

Eduardo Duarte, Diogo Gomes, David Campos, Rui L. Aguiar
Distributed and Scalable Platform for Collaborative Analysis of Massive Time Series Data Sets. DATA (2019)
David Campos, Renato P. Pinho, Ute Neugebauer, Jürgen Popp, José Luís Oliveira
A Computational Pipeline for Sepsis Patients' Stratification and Diagnosis. HEALTHINF (2018)
Qinghua Wang, Shabbir S. Abdul, Lara Almeida, Sophia Ananiadou, Yalbi I. Balderas-Martínez, Riza Batista-Navarro, David Campos, Lucy Chilton, Hui-Jou Chou, Gabriela Contreras, Laurel Cooper, Hong-Jie Dai, Barbra Ferrell, Juliane Fluck, Socorro Gama-Castro, Nancy George, Georgios V. Gkoutos, Afroza Khanam Irin, Lars Juhl Jensen, Silvia Jimenez, Toni Rose Jue, Ingrid M. Keseler, Sumit Madan, Sérgio Matos, Peter McQuilton, Marija Milacic, Matthew E. Mort, Jeyakumar Natarajan, Evangelos Pafilis, Emiliano Pereira, Shruti Rao, Fabio Rinaldi, Karen Rothfels, David Salgado, Raquel M. Silva, Onkar Singh, Raymund Stefancsik, Chu-Hsien Su, Suresh Subramani, Hamsa D. Tadepally, Loukia Tsaprouni, Nicole A. Vasilevsky, Xiaodong Wang, Andrew Chatr-aryamontri, Stanley J. F. Laulederkind, Sherri Matis-Mitchell, Johanna R. McEntyre, Sandra E. Orchard, Sangya Pundir, Raul Rodriguez-Esteban, Kimberly Van Auken, Zhiyong Lu, Mary L. Schaeffer, Cathy H. Wu, Lynette Hirschman, Cecilia N. Arighi
Overview of the interactive task in BioCreative V. Database J. Biol. Databases Curation 2016 (2016)
Sérgio Matos, David Campos, Renato P. Pinho, Raquel M. Silva, Matthew E. Mort, David N. Cooper, José Luís Oliveira
Mining clinical attributes of genomic variants through assisted literature curation in Egas. Database J. Biol. Databases Curation 2016 (2016)
Eriksson J. Melicio Monteiro, Carlos Costa, José Luís Oliveira, David Campos, Luís A. Bastião Silva
Caching and Prefetching Images in a Web-Based DICOM Viewer. CBMS (2016)
André Santos, Sérgio Matos, David Campos, José Luís Oliveira
A Curation Pipeline and Web-Services for PDF Documents. SMBM (2016)
Sun Kim, Rezarta Islamaj Dogan, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu, Yifan Peng, Cecilia N. Arighi, Cathy H. Wu, K. Vijay-Shanker, Ferhat Aydin, Zehra Melce Hüsünbeyi, Arzucan Özgür, Soo-Yong Shin, Dongseop Kwon, Kara Dolinski, Mike Tyers, W. John Wilbur, Donald C. Comeau
BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID. Database J. Biol. Databases Curation 2016 (2016)
Martin Krallinger, Obdulia Rabal, Florian Leitner, Miguel Vazquez, David Salgado, Zhiyong Lu, Robert Leaman, Yanan Lu, Donghong Ji, Daniel M. Lowe, Roger A. Sayle, Riza Theresa Batista-Navarro, Rafal Rak, Torsten Huber, Tim Rocktäschel, Sérgio Matos, David Campos, Buzhou Tang, Hua Xu, Tsendsuren Munkhdalai, Keun Ho Ryu, S. V. Ramanan, P. Senthil Nathan, Slavko Zitnik, Marko Bajec, Lutz Weber, Matthias Irmer, Saber A. Akhondi, Jan A. Kors, Shuo Xu, Xin An, Utpal Kumar Sikdar, Asif Ekbal, Masaharu Yoshioka, Thaer M. Dieb, Miji Choi, Karin Verspoor, Madian Khabsa, C. Lee Giles, Hongfang Liu, Ravikumar Komandur Elayavilli, Andre Lamurias, Francisco M. Couto, Hong-Jie Dai, Richard Tzong-Han Tsai, Caglar Ata, Tolga Can, Anabel Usie, Rui Alves, Isabel Segura-Bedmar, Paloma Martínez, Julen Oyarzabal, Alfonso Valencia
The CHEMDNER corpus of chemicals and drugs and its annotation principles. J. Cheminformatics 7 (S-1) (2015)
David Campos, Sérgio Matos, José Luís Oliveira
A document processing pipeline for annotating chemical entities in scientific documents. J. Cheminformatics 7 (S-1) (2015)
Pedro Sernadela, Pedro Lopes, David Campos, Sérgio Matos, José Luís Oliveira
A Semantic Layer for Unifying and Exploring Biomedical Document Curation Results. IWBBIO (1) (2015)
David Campos, Jóni Lourenço, Sérgio Matos, José Luís Oliveira
Egas: a collaborative and interactive document curation platform. Database J. Biol. Databases Curation 2014 (2014)
David Campos, Quoc-Chinh Bui, Sérgio Matos, José Luís Oliveira
TrigNER: automatically optimized biomedical event trigger recognition on scientific documents. Source Code Biol. Medicine 9 (2014)
Quoc-Chinh Bui, David Campos, Erik M. van Mulligen, Jan A. Kors
A fast rule-based approach for biomedical event extraction. BioNLP@ACL (Shared Task) (2013)
David Campos, Sérgio Matos, José Luís Oliveira
A modular framework for biomedical concept recognition. BMC Bioinform. 14 (2013)
David Campos, Sérgio Matos, José Luís Oliveira
Gimli: open source and high-performance biomedical name recognition. BMC Bioinform. 14 (2013)
Tiago Nunes, David Campos, Sérgio Matos, José Luís Oliveira
BeCAS: biomedical concept recognition services and visualization. Bioinform. 29 (15) (2013)
David Campos, Sérgio Matos, Ian Lewin, José Luís Oliveira, Dietrich Rebholz-Schuhmann
Harmonization of gene/protein annotations: towards a gold standard MEDLINE. Bioinform. 28 (9) (2012)
Zhiyong Lu, Hung-Yu Kao, Chih-Hsuan Wei, Minlie Huang, Jingchen Liu, Cheng-Ju Kuo, Chun-Nan Hsu, Richard Tzong-Han Tsai, Hong-Jie Dai, Naoaki Okazaki, Han-Cheol Cho, Martin Gerner, Illés Solt, Shashank Agarwal, Feifan Liu, Dina Vishnyakova, Patrick Ruch, Martin Romacker, Fabio Rinaldi, Sanmitra Bhattacharya, Padmini Srinivasan, Hongfang Liu, Manabu Torii, Sérgio Matos, David Campos, Karin Verspoor, Kevin M. Livingston, W. John Wilbur
The gene normalization task in BioCreative III. BMC Bioinform. 12 (S-8) (2011)
David Campos, Sérgio Matos, José Luís Oliveira
Recognition of Gene/Protein Names using Conditional Random Fields. KDIR (2010)
Pedro Lopes, Davide Pinto, David Campos, José Luís Oliveira
Arabella - A Directed Web Crawler. KDIR (2009)