Alexandra J. Golby

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 58

Top Topics

Rigid Registration

Top Venues

Int. J. Comput. Assist. Radiol. Surg.

Medical Imaging: Image-Guided Procedures

Publications

Yuqian Chen, Leo R. Zekelman, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Fan Zhang, Lauren J. O'Donnell
TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance. Medical Image Anal. 94 (2024)
Reuben Dorent, Erickson Torio, Nazim Haouchine, Colin Galvin, Sarah F. Frisken, Alexandra J. Golby, Tina Kapur, William M. Wells III
Patient-Specific Real-Time Segmentation in Trackerless Brain Ultrasound. CoRR (2024)
Yui Lo, Yuqian Chen, Dongnan Liu, Wan Liu, Leo R. Zekelman, Fan Zhang, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell
Cross-domain Fiber Cluster Shape Analysis for Language Performance Cognitive Score Prediction. CoRR (2024)
Kathleen Baur, Xin Xiong, Erickson Torio, Rose Du, Parikshit Juvekar, Reuben Dorent, Alexandra J. Golby, Sarah F. Frisken, Nazim Haouchine
Spatiotemporal Disentanglement of Arteriovenous Malformations in Digital Subtraction Angiography. CoRR (2024)
Nazim Haouchine, Reuben Dorent, Parikshit Juvekar, Erickson Torio, William M. Wells III, Tina Kapur, Alexandra J. Golby, Sarah F. Frisken
Learning Expected Appearances for Intraoperative Registration During Neurosurgery. MICCAI (9) (2023)
Ruben T. Lucassen, Mohammad H. Jafari, Nicole M. Duggan, Nick Jowkar, Alireza Mehrtash, Chanel E. Fischetti, Denie Bernier, Kira Prentice, Erik P. Duhaime, Mike Jin, Purang Abolmaesumi, Friso G. Heslinga, Mitko Veta, Maria Alejandra Duran Mendicuti, Sarah F. Frisken, Paul B. Shyn, Alexandra J. Golby, Edward W. Boyer, William M. Wells III, Andrew J. Goldsmith, Tina Kapur
Deep Learning for Detection and Localization of B-Lines in Lung Ultrasound. IEEE J. Biomed. Health Informatics 27 (9) (2023)
Reuben Dorent, Nazim Haouchine, Fryderyk Victor Kögl, Samuel Joutard, Parikshit Juvekar, Erickson Torio, Alexandra J. Golby, Sébastien Ourselin, Sarah F. Frisken, Tom Vercauteren, Tina Kapur, William M. Wells III
Unified Brain MR-Ultrasound Synthesis using Multi-Modal Hierarchical Representations. CoRR (2023)
Tengfei Xue, Yuqian Chen, Chaoyi Zhang, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell
TractCloud: Registration-Free Tractography Parcellation with a Novel Local-Global Streamline Point Cloud Representation. MICCAI (8) (2023)
Reuben Dorent, Nazim Haouchine, Fryderyk Victor Kögl, Samuel Joutard, Parikshit Juvekar, Erickson Torio, Alexandra J. Golby, Sébastien Ourselin, Sarah F. Frisken, Tom Vercauteren, Tina Kapur, William M. Wells III
Unified Brain MR-Ultrasound Synthesis Using Multi-modal Hierarchical Representations. MICCAI (10) (2023)
Jianzhong He, Fan Zhang, Yiang Pan, Yuanjing Feng, Jarrett Rushmore, Erickson Torio, Yogesh Rathi, Nikos Makris, Ron Kikinis, Alexandra J. Golby, Lauren J. O'Donnell
Reconstructing the somatotopic organization of the corticospinal tract remains a challenge for modern tractography methods. CoRR (2023)
Nazim Haouchine, Reuben Dorent, Parikshit Juvekar, Erickson Torio, William M. Wells III, Tina Kapur, Alexandra J. Golby, Sarah F. Frisken
Learning Expected Appearances for Intraoperative Registration during Neurosurgery. CoRR (2023)
Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell
Superficial white matter analysis: An efficient point-cloud-based deep learning framework with supervised contrastive learning for consistent tractography parcellation across populations and dMRI acquisitions. Medical Image Anal. 85 (2023)
Nikos Chrisochoides, Yixun Liu, Fotis Drakopoulos, Andriy Kot, Panagiotis A. Foteinos, Christos Tsolakis, Emmanuel Billias, Olivier Clatz, Nicholas Ayache, Andrey Fedorov, Alexandra J. Golby, Peter M. Black, Ron Kikinis
Comparison of physics-based deformable registration methods for image-guided neurosurgery. Frontiers Digit. Health 5 (2023)
Sipei Li, Jianzhong He, Tengfei Xue, Guoqiang Xie, Shun Yao, Yuqian Chen, Erickson F. Torio, Yuanjing Feng, Dhiego Chaves de Almeida Bastos, Yogesh Rathi, Nikos Makris, Ron Kikinis, Wenya Linda Bi, Alexandra J. Golby, Lauren J. O'Donnell, Fan Zhang
DEEPRGVP: A novel microstructure-informed supervised contrastive learning framework for automated identification of the retinogeniculate pathway using dMRI tractography. ISBI (2023)
Yuqian Chen, Leo R. Zekelman, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Fan Zhang, Lauren J. O'Donnell
TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance. CoRR (2023)
Matthew A. Haber, Giorgio Pietro Biondetti, Romane Gauriau, Donnella S. Comeau, John K. Chin, Bernardo C. Bizzo, Julia Strout, Alexandra J. Golby, Katherine P. Andriole
Detection of idiopathic normal pressure hydrocephalus on head CT using a deep convolutional neural network. Neural Comput. Appl. 35 (13) (2023)
Fryderyk Victor Kögl, Étienne Léger, Nazim Haouchine, Erickson Torio, Parikshit Juvekar, Nassir Navab, Tina Kapur, Steve Pieper, Alexandra J. Golby, Sarah F. Frisken
A tool-free neuronavigation method based on single-view hand tracking. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 11 (4) (2023)
Saima Safdar, Benjamin F. Zwick, Yue Yu, George C. Bourantas, Grand R. Joldes, Simon K. Warfield, Damon E. Hyde, Sarah F. Frisken, Tina Kapur, Ron Kikinis, Alexandra J. Golby, Arya Nabavi, Adam Wittek, Karol Miller
SlicerCBM: automatic framework for biomechanical analysis of the brain. Int. J. Comput. Assist. Radiol. Surg. 18 (10) (2023)
Tengfei Xue, Yuqian Chen, Chaoyi Zhang, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell
TractCloud: Registration-free tractography parcellation with a novel local-global streamline point cloud representation. CoRR (2023)
Yue Yu, Saima Safdar, George C. Bourantas, Benjamin Zwick, Grand R. Joldes, Tina Kapur, Sarah F. Frisken, Ron Kikinis, Arya Nabavi, Alexandra J. Golby, Adam Wittek, Karol Miller
Automatic framework for patient-specific modelling of tumour resection-induced brain shift. Comput. Biol. Medicine 143 (2022)
Yuqian Chen, Fan Zhang, Chaoyi Zhang, Tengfei Xue, Leo R. Zekelman, Jianzhong He, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Tom Weidong Cai, Lauren J. O'Donnell
White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. CoRR (2022)
Nazim Haouchine, Parikshit Juvekar, Michael Nercessian, William M. Wells III, Alexandra J. Golby, Sarah F. Frisken
Pose Estimation and Non-Rigid Registration for Augmented Reality During Neurosurgery. IEEE Trans. Biomed. Eng. 69 (4) (2022)
Leo R. Zekelman, Fan Zhang, Nikos Makris, Jianzhong He, Yuqian Chen, Tengfei Xue, Daniela Liera, Daniel L. Drane, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell
White matter association tracts underlying language and theory of mind: An investigation of 809 brains from the Human Connectome Project. NeuroImage 246 (2022)
Yuqian Chen, Fan Zhang, Chaoyi Zhang, Tengfei Xue, Leo R. Zekelman, Jianzhong He, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell
White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. MICCAI (1) (2022)
Étienne Léger, Samantha Horvath, Jean-Christophe Fillion-Robin, David Allemang, Samuel Gerber, Parikshit Juvekar, Erickson Torio, Tina Kapur, Steve Pieper, Sonia Pujol, Ryan S. Bardsley, Sarah F. Frisken, Alexandra J. Golby
NousNav: A low-cost neuronavigation system for deployment in lower-resource settings. Int. J. Comput. Assist. Radiol. Surg. 17 (9) (2022)
Sipei Li, Jianzhong He, Tengfei Xue, Guoqiang Xie, Shun Yao, Yuqian Chen, Erickson F. Torio, Yuanjing Feng, Dhiego Chaves de Almeida Bastos, Yogesh Rathi, Nikos Makris, Ron Kikinis, Wenya Linda Bi, Alexandra J. Golby, Lauren J. O'Donnell, Fan Zhang
DeepRGVP: A Novel Microstructure-Informed Supervised Contrastive Learning Framework for Automated Identification Of The Retinogeniculate Pathway Using dMRI Tractography. CoRR (2022)
Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell
Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learning for Consistent Tractography Parcellation across Populations and dMRI Acquisitions. CoRR (2022)
Sarah F. Frisken, Nazim Haouchine, Rose Du, Alexandra J. Golby
Using temporal and structural data to reconstruct 3D cerebral vasculature from a pair of 2D digital subtraction angiography sequences. Comput. Medical Imaging Graph. 99 (2022)
Sarah F. Frisken, Parikshit Juvekar, Wenya Linda Bi, Alexandra J. Golby
Mapping the progression of resection continuously during brain tumor surgery. Medical Imaging: Image-Guided Procedures (2021)
Fang-Cheng Yeh, Andrei Irimia, Dhiego Chaves de Almeida Bastos, Alexandra J. Golby
Tractography methods and findings in brain tumors and traumatic brain injury. NeuroImage 245 (2021)
Nazim Haouchine, Parikshit Juvekar, Alexandra J. Golby, Sarah F. Frisken
Predicted microscopic cortical brain images for optimal craniotomy positioning and visualisation. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 9 (4) (2021)
Michael Nercessiany, Nazim Haouchine, Parikshit Juvekar, Sarah F. Frisken, Alexandra J. Golby
Deep Cortical Vessel Segmentation Driven By Data Augmentation With Neural Image Analogy. ISBI (2021)
Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang-Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick Jorge Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio M. Innocenti, Jean-Philippe Thiran, Laura Mancini, Stephen J. Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attye, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied A. Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M. W. Tax, Ping Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan-Mou Yang, Jian Chen, Claire E. Kelly, Chun-Hung Yeh, Jérôme Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra J. Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramirez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean-François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Perez, Catherine Lebel, Jess E Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux
Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? NeuroImage 243 (2021)
Nazim Haouchine, Parikshit Juvekar, Xin Xiong, Jie Luo, Tina Kapur, Rose Du, Alexandra J. Golby, Sarah F. Frisken
Estimation of High Framerate Digital Subtraction Angiography Sequences at Low Radiation Dose. MICCAI (6) (2021)
Fan Zhang, Guoqiang Xie, Laura Leung, Michael A. Mooney, Lorenz Epprecht, Isaiah Norton, Yogesh Rathi, Ron Kikinis, Ossama Al-Mefty, Nikos Makris, Alexandra J. Golby, Lauren J. O'Donnell
Creation of a novel trigeminal tractography atlas for automated trigeminal nerve identification. NeuroImage 220 (2020)
Jie Luo, Sarah F. Frisken, Duo Wang, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III
Are Registration Uncertainty and Error Monotonically Associated? MICCAI (3) (2020)
Sarah F. Frisken, Ma Luo, Parikshit Juvekar, Adomas Bunevicius, Inês Machado, Prashin Unadkat, Melina M. Bertotti, Matthew Toews, William M. Wells III, Michael I. Miga, Alexandra J. Golby
A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection. Int. J. Comput. Assist. Radiol. Surg. 15 (1) (2020)
Fotis Drakopoulos, Christos Tsolakis, Angelos Angelopoulos, Yixun Liu, Chengjun Yao, Kyriaki Rafailia Kavazidi, Nicolas Foroglou, Andrey Fedorov, Sarah F. Frisken, Ron Kikinis, Alexandra J. Golby, Nikos Chrisochoides
Adaptive Physics-Based Non-Rigid Registration for Immersive Image-Guided Neuronavigation Systems. Frontiers Digit. Health 2 (2020)
Fan Zhang, Suheyla Cetin Karayumak, Nico Hoffmann, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell
Deep white matter analysis (DeepWMA): Fast and consistent tractography segmentation. Medical Image Anal. 65 (2020)
Nazim Haouchine, Parikshit Juvekar, William M. Wells III, Stephane Cotin, Alexandra J. Golby, Sarah F. Frisken
Deformation Aware Augmented Reality for Craniotomy Using 3D/2D Non-rigid Registration of Cortical Vessels. MICCAI (4) (2020)
Jie Luo, Guangshen Ma, Sarah F. Frisken, Parikshit Juvekar, Nazim Haouchine, Zhe Xu, Yiming Xiao, Alexandra J. Golby, Patrick J. Codd, Masashi Sugiyama, William M. Wells III
Do Public Datasets Assure Unbiased Comparisons for Registration Evaluation? CoRR (2020)
Nazim Haouchine, Parikshit Juvekar, Alexandra J. Golby, William M. Wells III, Stephane Cotin, Sarah F. Frisken
Alignment of cortical vessels viewed through the surgical microscope with preoperative imaging to compensate for brain shift. Medical Imaging: Image-Guided Procedures (2020)
Soumya Ghose, David Mills, Jhimli Mitra, L. Scott Smith, Desmond Teck-Beng Yeo, Alexandra J. Golby, Sarah F. Frisken, Thomas K. Foo
Automatic brain structure-guided registration of pre and intra-operative 3D ultrasound for neurosurgery. Medical Imaging: Image-Guided Procedures (2020)
Fan Zhang, Nico Hoffmann, Suheyla Cetin Karayumak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell
Deep White Matter Analysis: Fast, Consistent Tractography Segmentation Across Populations and dMRI Acquisitions. MICCAI (3) (2019)
Ma Luo, Sarah F. Frisken, Saramati Narasimhan, Logan W. Clements, Reid Carleton Thompson, Alexandra J. Golby, Michael I. Miga
A comprehensive model-assisted brain shift correction approach in image-guided neurosurgery: a case study in brain swelling and subsequent sag after craniotomy. Medical Imaging: Image-Guided Procedures (2019)
Sarah F. Frisken, Ma Luo, Inês Machado, Prashin Unadkat, Parikshit Juvekar, Adomas Bunevicius, Matthew Toews, William M. Wells III, Michael I. Miga, Alexandra J. Golby
Preliminary results comparing thin-plate splines with finite element methods for modeling brain deformation during neurosurgery using intraoperative ultrasound. Medical Imaging: Image-Guided Procedures (2019)
Jie Luo, Alireza Sedghi, Karteek Popuri, Dana Cobzas, Miaomiao Zhang, Frank Preiswerk, Matthew Toews, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III, Sarah F. Frisken
On the Applicability of Registration Uncertainty. MICCAI (2) (2019)
Inês Machado, Matthew Toews, Elizabeth George, Prashin Unadkat, Walid Essayed, Jie Luo, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III, Yangming Ou
Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data. NeuroImage 202 (2019)
Jie Luo, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III, Sarah F. Frisken
Pilot Study on Verifying the Monotonic Relationship between Error and Uncertainty in Deformable Registration for Neurosurgery. CoRR (2019)
Jie Luo, Sarah F. Frisken, Inês Machado, Miaomiao Zhang, Steve Pieper, Polina Golland, Matthew Toews, Prashin Unadkat, Alireza Sedghi, Haoyin Zhou, Alireza Mehrtash, Frank Preiswerk, Cheng-Chieh Cheng, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III
Using the variogram for vector outlier screening: application to feature-based image registration. Int. J. Comput. Assist. Radiol. Surg. 13 (12) (2018)
Jie Luo, Sarah F. Frisken, Karteek Popuri, Dana Cobzas, Frank Preiswerk, Matthew Toews, Miaomiao Zhang, Hongyi Ding, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III
On the Ambiguity of Registration Uncertainty. CoRR (2018)
Inês Machado, Matthew Toews, Jie Luo, Prashin Unadkat, Walid Essayed, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William Wells
Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching. Int. J. Comput. Assist. Radiol. Surg. 13 (10) (2018)
Inês Machado, Matthew Toews, Jie Luo, Prashin Unadkat, Walid Essayed, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III, Yangming Ou
Deformable MRI-Ultrasound Registration via Attribute Matching and Mutual-Saliency Weighting for Image-Guided Neurosurgery. POCUS/BIVPCS/CuRIOUS/CPM@MICCAI (2018)
Jie Luo, Matthew Toews, Inês Machado, Sarah F. Frisken, Miaomiao Zhang, Frank Preiswerk, Alireza Sedghi, Hongyi Ding, Steve Pieper, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III
A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation. MICCAI (4) (2018)
Jie Luo, Matthew Toews, Inês Machado, Sarah F. Frisken, Miaomiao Zhang, Frank Preiswerk, Alireza Sedghi, Hongyi Ding, Steve Pieper, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III
A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation. CoRR (2018)
Fan Zhang, Pegah Kahali, Yannick Suter, Isaiah Norton, Laura Rigolo, Peter Savadjiev, Yang Song, Yogesh Rathi, Tom Weidong Cai, William M. Wells III, Alexandra J. Golby, Lauren J. O'Donnell
Automated connectivity-based groupwise cortical atlas generation: Application to data of neurosurgical patients with brain tumors for cortical parcellation prediction. ISBI (2017)
Ma Luo, Sarah F. Frisken, Jared A. Weis, Logan W. Clements, Prashin Unadkat, Reid Carleton Thompson, Alexandra J. Golby, Michael I. Miga
Validation of model-based brain shift correction in neurosurgery via intraoperative magnetic resonance imaging: preliminary results. Medical Imaging: Image-Guided Procedures (2017)
Zhenrui Chen, Yanmei Tie, Olutayo I. Olubiyi, Fan Zhang, Alireza Mehrtash, Laura Rigolo, Pegah Kahali, Isaiah Norton, Ofer Pasternak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell
Corticospinal tract modeling for neurosurgical planning by tracking through regions of peritumoral edema and crossing fibers using two-tensor unscented Kalman filter tractography. Int. J. Comput. Assist. Radiol. Surg. 11 (8) (2016)
Georg Langs, Andrew Sweet, Danial Lashkari, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland
Decoupling function and anatomy in atlases of functional connectivity patterns: Language mapping in tumor patients. NeuroImage 103 (2014)
Matthew Toews, Alexandra J. Golby, William M. Wells III
Inter-slice Correspondence for 2D Ultrasound-Guided Procedures. CLIP (2013)
Lauren J. O'Donnell, Alexandra J. Golby, Carl-Fredrik Westin
Fiber clustering versus the parcellation-based connectome. NeuroImage 80 (2013)
Petter Risholm, Firdaus Janoos, Isaiah Norton, Alexandra J. Golby, William M. Wells III
Bayesian characterization of uncertainty in intra-subject non-rigid registration. Medical Image Anal. 17 (5) (2013)
Jan Egger, Tina Kapur, Andriy Fedorov, Steve Pieper, James V. Miller, Harini Veeraraghavan, Bernd Freisleben, Alexandra J. Golby, Christopher Nimsky, Ron Kikinis
GBM Volumetry using the 3D Slicer Medical Image Computing Platform CoRR (2013)
Lauren J. O'Donnell, William M. Wells III, Alexandra J. Golby, Carl-Fredrik Westin
Unbiased Groupwise Registration of White Matter Tractography. MICCAI (3) (2012)
Lauren J. O'Donnell, Laura Rigolo, Isaiah Norton, William M. Wells III, Carl-Fredrik Westin, Alexandra J. Golby
fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts. NeuroImage 60 (1) (2012)
Georg Langs, Danial Lashkari, Andrew Sweet, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland
Learning an Atlas of a Cognitive Process in Its Functional Geometry. IPMI (2011)
Claus Reinsberger, Naoaki Tanaka, Andrew J. Cole, Jong Woo Lee, Barbara A. Dworetzky, Edward Bromfield, Lorie Hamiwka, Blaise F. Bourgeois, Alexandra J. Golby, Joseph R. Madsen, Steven M. Stufflebeam
Current dipole orientation and distribution of epileptiform activity correlates with cortical thinning in left mesiotemporal epilepsy. NeuroImage 52 (4) (2010)
Lauren J. O'Donnell, Carl-Fredrik Westin, Isaiah Norton, Stephen Whalen, Laura Rigolo, Ruth E. Propper, Alexandra J. Golby
The Fiber Laterality Histogram: A New Way to Measure White Matter Asymmetry. MICCAI (2) (2010)
Georg Langs, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland
Functional Geometry Alignment and Localization of Brain Areas. NIPS (2010)
Lauren J. O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby
Tract-based morphometry for white matter group analysis. NeuroImage 45 (3) (2009)
Julien Dauguet, Simon K. Warfield, Edward Bromfield, Alexandra J. Golby, Jong Woo Lee
Comparison of the deformations of brain tissues caused by tumor in seizure and non-seizure patients. ISBI (2008)
Clare B. Poynton, Mark Jenkinson, Stephen Whalen, Alexandra J. Golby, William M. Wells III
Fieldmap-Free Retrospective Registration and Distortion Correction for EPI-Based Functional Imaging. MICCAI (2) (2008)
Yanmei Tie, Stephen Whalen, Ralph O. Suarez, Alexandra J. Golby
Group independent component analysis of language fMRI from word generation tasks. NeuroImage 42 (3) (2008)
Arish A. Qazi, Gordon L. Kindlmann, Lauren O'Donnell, Sharon Peled, Alireza Radmanesh, Stephen Whalen, Alexandra J. Golby, Carl-Fredrik Westin
Two-tensor streamline tractography through white matter intra-voxel fiber crossings: Assessed by fMRI. CVPR Workshops (2008)
Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Daniel Goldberg-Zimring, Daniel F. Kacher, Stephen Whalen, Ron Kikinis, Ferenc A. Jolesz, Olivier Clatz, Simon K. Warfield, Peter M. Black, Alexandra J. Golby
Grid-Enabled Software Environment for Enhanced Dynamic Data-Driven Visualization and Navigation During Image-Guided Neurosurgery. International Conference on Computational Science (1) (2007)
Lauren O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby
Tract-Based Morphometry. MICCAI (2) (2007)
Neculai Archip, Olivier Clatz, Stephen Whalen, Daniel F. Kacher, Andriy Fedorov, Andriy Kot, Nikos Chrisochoides, Ferenc A. Jolesz, Alexandra J. Golby, Peter M. Black, Simon K. Warfield
Non-rigid alignment of pre-operative MRI, fMRI, and DT-MRI with intra-operative MRI for enhanced visualization and navigation in image-guided neurosurgery. NeuroImage 35 (2) (2007)
James P. O'Shea, William M. Wells III, Alexandra J. Golby
Using surface normals to localize subdural intracranial electrodes placed during neurosurgery. ISBI (2006)
Neculai Archip, Andriy Fedorov, Bryn Lloyd, Nikos Chrisochoides, Alexandra J. Golby, Peter M. Black, Simon K. Warfield
Integration of patient specific modeling and advanced image processing techniques for image-guided neurosurgery. Medical Imaging: Image-Guided Procedures (2006)
Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter M. Black, Olivier Clatz, Alexandra J. Golby, Ron Kikinis, Simon K. Warfield
Imaging and visual analysis - Toward real-time image guided neurosurgery using distributed and grid computing. SC (2006)
Daniel M. Branco, Ralph O. Suarez, Stephen Whalen, James P. O'Shea, Aaron P. Nelson, Jaderson C. da Costa, Alexandra J. Golby
Functional MRI of memory in the hippocampus: Laterality indices may be more meaningful if calculated from whole voxel distributions. NeuroImage 32 (2) (2006)
Simon K. Warfield, Steven Haker, Ion-Florin Talos, Corey Kemper, Neil I. Weisenfeld, Andrea J. U. Mewes, Daniel Goldberg-Zimring, Kelly H. Zou, Carl-Fredrik Westin, William M. Wells III, Clare M. Tempany, Alexandra J. Golby, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis
Capturing intraoperative deformations: research experience at Brigham and Women's hospital. Medical Image Anal. 9 (2) (2005)
Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc A. Jolesz, Nicholas Ayache, Simon K. Warfield
Hybrid Formulation of the Model-Based Non-rigid Registration Problem to Improve Accuracy and Robustness. MICCAI (2) (2005)
Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc A. Jolesz, Nicholas Ayache, Simon K. Warfield
Robust nonrigid registration to capture brain shift from intraoperative MRI. IEEE Trans. Medical Imaging 24 (11) (2005)
Corey Kemper, Ion-Florin Talos, Alexandra J. Golby, Peter M. Black, Ron Kikinis, W. Eric L. Grimson, Simon K. Warfield
An Anisotropic Material Model for Image Guided Neurosurgery. MICCAI (2) (2004)
Ion-Florin Talos, Lauren O'Donnell, Carl-Fredrik Westin, Simon K. Warfield, William M. Wells III, Seung-Schik Yoo, Lawrence P. Panych, Alexandra J. Golby, Hatsuho Mamata, Stefan S. Maier, Peter Ratiu, Charles R. G. Guttmann, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis
Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-Guided Neurosurgery. MICCAI (1) (2003)