Lauren O'Donnell

Publication Activity (10 Years)

Years Active: 2001-2022
Publications (10 Years): 10

Top Topics

Sparse Reconstruction

Nonrigid Registration

Cell Segmentation

Top Venues

Medical Image Anal.

IEEE Trans. Medical Imaging

Publications

Tiange Xiang, Yang Song, Chaoyi Zhang, Dongnan Liu, Mei Chen, Fan Zhang, Heng Huang, Lauren O'Donnell, Weidong Cai
DSNet: A Dual-Stream Framework for Weakly-Supervised Gigapixel Pathology Image Analysis. IEEE Trans. Medical Imaging 41 (8) (2022)
Dongnan Liu, Donghao Zhang, Yang Song, Fan Zhang, Lauren O'Donnell, Heng Huang, Mei Chen, Weidong Cai
PDAM: A Panoptic-Level Feature Alignment Framework for Unsupervised Domain Adaptive Instance Segmentation in Microscopy Images. IEEE Trans. Medical Imaging 40 (1) (2021)
Yuqian Chen, Yang Song, Chaoyi Zhang, Fan Zhang, Lauren O'Donnell, Wojciech Chrzanowski, Weidong Cai
Celltrack R-CNN: A Novel End-To-End Deep Neural Network For Cell Segmentation And Tracking In Microscopy Images. ISBI (2021)
Yuqian Chen, Yang Song, Chaoyi Zhang, Fan Zhang, Lauren O'Donnell, Wojciech Chrzanowski, Weidong Cai
CellTrack R-CNN: A Novel End-To-End Deep Neural Network for Cell Segmentation and Tracking in Microscopy Images. CoRR (2021)
Tiange Xiang, Yang Song, Chaoyi Zhang, Dongnan Liu, Mei Chen, Fan Zhang, Heng Huang, Lauren O'Donnell, Weidong Cai
DSNet: A Dual-Stream Framework for Weakly-Supervised Gigapixel Pathology Image Analysis. CoRR (2021)
Dongnan Liu, Donghao Zhang, Yang Song, Fan Zhang, Lauren O'Donnell, Heng Huang, Mei Chen, Weidong Cai
Unsupervised Instance Segmentation in Microscopy Images via Panoptic Domain Adaptation and Task Re-Weighting. CVPR (2020)
Dongnan Liu, Donghao Zhang, Yang Song, Fan Zhang, Lauren O'Donnell, Heng Huang, Mei Chen, Weidong Cai
Unsupervised Instance Segmentation in Microscopy Images via Panoptic Domain Adaptation and Task Re-weighting. CoRR (2020)
Daniel Haehn, Loraine Franke, Fan Zhang, Suheyla Cetin Karayumak, Steve Pieper, Lauren O'Donnell, Yogesh Rathi
TRAKO: Efficient Transmission of Tractography Data for Visualization. CoRR (2020)
Dongnan Liu, Donghao Zhang, Yang Song, Chaoyi Zhang, Fan Zhang, Lauren O'Donnell, Weidong Cai
Nuclei Segmentation via a Deep Panoptic Model with Semantic Feature Fusion. IJCAI (2019)
Tina Kapur, Steve Pieper, Andriy Fedorov, Jean-Christophe Fillion-Robin, Michael Halle, Lauren O'Donnell, Andras Lasso, Tamas Ungi, Csaba Pinter, Julien Finet, Sonia Pujol, Jagadeesan Jayender, Junichi Tokuda, Isaiah Norton, Raúl San José Estépar, David T. Gering, Hugo J. W. L. Aerts, Marianna Jakab, Nobuhiko Hata, Luiz Ibáñez, Daniel J. Blezek, Jim Miller, Stephen R. Aylward, W. Eric L. Grimson, Gabor Fichtinger, William M. Wells III, William E. Lorensen, William J. Schroeder, Ron Kikinis
Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience. Medical Image Anal. 33 (2016)
Lipeng Ning, Frederik B. Laun, Yaniv Gur, Edward V. R. DiBella, Samuel Deslauriers-Gauthier, Thinhinane Megherbi, Aurobrata Ghosh, Mauro Zucchelli, Gloria Menegaz, Rutger Fick, Samuel St-Jean, Michael Paquette, Ramón Aranda, Maxime Descoteaux, Rachid Deriche, Lauren O'Donnell, Yogesh Rathi
Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use? Medical Image Anal. 26 (1) (2015)
Arish A. Qazi, Gordon L. Kindlmann, Lauren O'Donnell, Sharon Peled, Alireza Radmanesh, Stephen Whalen, Alexandra J. Golby, Carl-Fredrik Westin
Two-tensor streamline tractography through white matter intra-voxel fiber crossings: Assessed by fMRI. CVPR Workshops (2008)
Ulas Ziyan, Mert R. Sabuncu, Lauren O'Donnell, Carl-Fredrik Westin
Nonlinear Registration of Diffusion MR Images Based on Fiber Bundles. MICCAI (1) (2007)
Lauren O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby
Tract-Based Morphometry. MICCAI (2) (2007)
Lauren O'Donnell, Carl-Fredrik Westin
High-Dimensional White Matter Atlas Generation and Group Analysis. MICCAI (2) (2006)
Lauren O'Donnell, Carl-Fredrik Westin
White Matter Tract Clustering and Correspondence in Populations. MICCAI (2005)
Lauren O'Donnell, W. Eric L. Grimson, Carl-Fredrik Westin
Interface Detection in Diffusion Tensor MRI. MICCAI (1) (2004)
Ion-Florin Talos, Lauren O'Donnell, Carl-Fredrik Westin, Simon K. Warfield, William M. Wells III, Seung-Schik Yoo, Lawrence P. Panych, Alexandra J. Golby, Hatsuho Mamata, Stefan S. Maier, Peter Ratiu, Charles R. G. Guttmann, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis
Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-Guided Neurosurgery. MICCAI (1) (2003)
Simon K. Warfield, Ion-Florin Talos, Corey Kemper, Lauren O'Donnell, Carl-Fredrik Westin, William M. Wells III, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis
Capturing Brain Deformation. IS4TH (2003)
Lauren O'Donnell, Steven Haker, Carl-Fredrik Westin
New Approaches to Estimation of White Matter Connectivity in Diffusion Tensor MRI: Elliptic PDEs and Geodesics in a Tensor-Warped Space. MICCAI (1) (2002)
Lauren O'Donnell, Carl-Fredrik Westin, W. Eric L. Grimson, Juan Ruiz-Alzola, Martha Elizabeth Shenton, Ron Kikinis
Phase-Based User-Steered Image Segmentation. MICCAI (2001)