Eleftherios Garyfallidis

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 22

Top Topics

Corpus Callosum

Top Venues

Neuroinformatics

Frontiers Neuroinformatics

Publications

Praitayini Kanakaraj, Tianyuan Yao, Leon Y. Cai, Ho Hin Lee, Nancy R. Newlin, Michael E. Kim, Chenyu Gao, Kimberly R. Pechman, Derek B. Archer, Timothy J. Hohman, Angela L. Jefferson, Lori L. Beason-Held, Susan M. Resnick, Eleftherios Garyfallidis, Adam W. Anderson, Kurt G. Schilling, Bennett A. Landman, Daniel Moyer
DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images. Neuroinformatics 22 (2) (2024)
Soichi Hayashi, Bradley Caron, Anibal Solon Heinsfeld, Sophia Vinci-Booher, Brent C. McPherson, Daniel N. Bullock, Giulia Berto, J. Guiomar Niso, Sandra Hanekamp, Daniel Levitas, Lindsey Kitchell, Josiah Leong, Filipi N. Silva, Serge Koudoro, Hanna Willis, Jasleen Jolly, Derek Pisner, Taylor Zuidema, Jan Kurzwaski, Koulla Mikellidou, Aurore Bussalb, Christopher Rorden, Conner Victory, Dheeraj Bhatia, Dogu Baran Aydogan, Frank C. Yeh, Franco Delogu, Javier Guaje, Jelle Veraart, Jeremy Fischer, Joshua Faskowitz, Maximilien Chaumon, Ricardo Fabrega, David Hunt, Shawn McKee, Shaw T. Brown, Stephanie Heyman, Vittorio Iacovella, Amanda Mejia, Daniele Marinazzo, R. Cameron Craddock, Emanuele Olivetti, Jamie Hanson, Paolo Avesani, Eleftherios Garyfallidis, Daniel Stanzione, James P. Carson, Robert Henschel, David Y. Hancock, Craig A. Stewart, David M. Schnyer, Damian Eke, Russell A. Poldrack, Nathalie George, Holly Bridge, Ilaria Sani, Winrich Freiwald, Aina Puce, Nicholas Port, Franco Pestilli
brainlife.io: A decentralized and open source cloud platform to support neuroscience research. CoRR (2023)
Kurt G. Schilling, Shreyas Fadnavis, Joshua Batson, Mereze Visagie, Anna J. E. Combes, Samantha By, Colin D. Mcknight, Francesca Bagnato, Eleftherios Garyfallidis, Bennett A. Landman, Seth A. Smith, Kristin P. O'Grady
Denoising of diffusion MRI in the cervical spinal cord - effects of denoising strategy and acquisition on intra-cord contrast, signal modeling, and feature conspicuity. NeuroImage 266 (2023)
Felix Liu, Vanitha Sankaranarayanan, Javier E. Villanueva-Meyer, Shawn Hervey-Jumper, James Hawkins, Pablo F. Damasceno, Mauro Bisson, Joshua Romero, Thorsten Kurth, Massimiliano Fatica, Eleftherios Garyfallidis, Ariel Rokem, Jason C. Crane, Sharmila Majumdar
Clinical validation of rapid GPU-enabled DTI tractography of the brain. High Performance Computing for Imaging (2023)
Jong Sung Park, Shreyas Fadnavis, Eleftherios Garyfallidis
EVC-Net: Multi-scale V-Net with Conditional Random Fields for Brain Extraction. CoRR (2022)
Chantal M. W. Tax, Matteo Bastiani, Jelle Veraart, Eleftherios Garyfallidis, M. Okan Irfanoglu
What's new and what's next in diffusion MRI preprocessing. NeuroImage 249 (2022)
Bramsh Qamar Chandio, Tamoghna Chattopadhyay, Conor Owens-Walton, Julio E. Villalon-Reina, Leila Nabulsi, Sophia I. Thomopoulos, Eleftherios Garyfallidis, Paul M. Thompson
FiberNeat: Unsupervised White Matter Tract Filtering. EMBC (2022)
Shreyas Fadnavis, Jens Sjölund, Anders Eklund, Eleftherios Garyfallidis
NUQ: A Noise Metric for Diffusion MRI via Uncertainty Discrepancy Quantification. CoRR (2022)
Etienne St-Onge, Eleftherios Garyfallidis, D. Louis Collins
Fast Streamline Search: An Exact Technique for Diffusion MRI Tractography. Neuroinformatics 20 (4) (2022)
Etienne St-Onge, Eleftherios Garyfallidis, D. Louis Collins
Fast Tractography Streamline Search. CDMRI@MICCAI (2021)
Alberto De Luca, Andrada Ianus, Alexander Leemans, Marco Palombo, Noam Shemesh, Hui Zhang, Daniel C. Alexander, Markus Nilsson, Martijn Froeling, Geert Jan Biessels, Mauro Zucchelli, Matteo Frigo, Enes Albay, Sara Sedlar, Abib Alimi, Samuel Deslauriers-Gauthier, Rachid Deriche, Rutger Fick, Maryam Afzali, Tomasz Pieciak, Fabian Bogusz, Santiago Aja-Fernández, Evren Özarslan, Derek K. Jones, Haoze Chen, Mingwu Jin, Zhijie Zhang, Fengxiang Wang, Vishwesh Nath, Prasanna Parvathaneni, Jan Morez, Jan Sijbers, Ben Jeurissen, Shreyas Fadnavis, Stefan Endres, Ariel Rokem, Eleftherios Garyfallidis, Irina Sánchez, Vesna Prchkovska, Paulo Rodrigues, Bennett A. Landman, Kurt G. Schilling
On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: Chronicles of the MEMENTO challenge. NeuroImage 240 (2021)
Eleftherios Garyfallidis, Serge Koudoro, Javier Guaje, Marc-Alexis Côté, Soham Biswas, David Reagan, Nasim Anousheh, Filipi Silva, Geoffrey C. Fox, Fury Contributors
FURY: advanced scientific visualization. J. Open Source Softw. 6 (64) (2021)
Colin B. Hansen, Qi Yang, Ilwoo Lyu, Francois Rheault, Cailey I. Kerley, Bramsh Qamar Chandio, Shreyas Fadnavis, Owen A. Williams, Andrea T. Shafer, Susan M. Resnick, David H. Zald, Laurie E. Cutting, Warren D. Taylor, Brian D. Boyd, Eleftherios Garyfallidis, Adam W. Anderson, Maxime Descoteaux, Bennett A. Landman, Kurt G. Schilling
Pandora: 4-D White Matter Bundle Population-Based Atlases Derived from Diffusion MRI Fiber Tractography. Neuroinformatics 19 (3) (2021)
Eleftherios Garyfallidis, Shreyas Fadnavis, Jong Sung Park, Bramsh Qamar Chandio, Javier Guaje, Serge Koudoro, Nasim Anousheh
ThetA - fast and robust clustering via a distance parameter. CoRR (2021)
Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang-Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick Jorge Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio M. Innocenti, Jean-Philippe Thiran, Laura Mancini, Stephen J. Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attye, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied A. Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M. W. Tax, Ping Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan-Mou Yang, Jian Chen, Claire E. Kelly, Chun-Hung Yeh, Jérôme Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra J. Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramirez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean-François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Perez, Catherine Lebel, Jess E Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux
Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? NeuroImage 243 (2021)
Shreyas Fadnavis, Joshua Batson, Eleftherios Garyfallidis
Patch2Self: Denoising Diffusion MRI with Self-Supervised Learning. NeurIPS (2020)
Shreyas Fadnavis, Joshua Batson, Eleftherios Garyfallidis
Patch2Self: Denoising Diffusion MRI with Self-Supervised Learning. CoRR (2020)
Alexandra Badea, Wenlin Wu, Jordan Shuff, Michele Wang, Robert J. Anderson, Yi Qi, G. Allan Johnson, Joan G. Wilson, Serge Koudoro, Eleftherios Garyfallidis, Carol A. Colton, David B. Dunson
Identifying Vulnerable Brain Networks in Mouse Models of Genetic Risk Factors for Late Onset Alzheimer's Disease. Frontiers Neuroinformatics 13 (2019)
Shreyas Fadnavis, Hamza Farooq, Maryam Afzali, Christophe Lenglet, Tryphon T. Georgiou, Hu Cheng, Sharlene D. Newman, Shahnawaz Ahmed, Rafael Neto Henriques, Eric Peterson, Serge Koudoro, Ariel Rokem, Eleftherios Garyfallidis
Fitting IVIM with Variable Projection and Simplicial Optimization. CoRR (2019)
Eleftherios Garyfallidis, Marc-Alexandre Côté, Francois Rheault, Jasmeen Sidhu, Janice Hau, Laurent Petit, David Fortin, Stephen Cunanne, Maxime Descoteaux
Recognition of white matter bundles using local and global streamline-based registration and clustering. NeuroImage 170 (2018)
A. Chekir, Salima Hassas, Maxime Descoteaux, Marc-Alexandre Côté, Eleftherios Garyfallidis, Fatima Oulebsir-Boumghar
3D-SSF: A bio-inspired approach for dynamic multi-subject clustering of white matter tracts. Comput. Biol. Medicine 83 (2017)
Omar Ocegueda, Oscar Dalmau Cedeño, Eleftherios Garyfallidis, Maxime Descoteaux, Mariano Rivera
On the computation of integrals over fixed-size rectangles of arbitrary dimension. Pattern Recognit. Lett. 79 (2016)
Eleftherios Garyfallidis, Omar Ocegueda, Demian Wassermann, Maxime Descoteaux
Robust and efficient linear registration of white-matter fascicles in the space of streamlines. NeuroImage 117 (2015)
Diana Porro-Muñoz, Emanuele Olivetti, Nusrat Sharmin, Thien Bao Nguyen, Eleftherios Garyfallidis, Paolo Avesani
Tractome: a visual data mining tool for brain connectivity analysis. Data Min. Knowl. Discov. 29 (5) (2015)
Alessandro Daducci, Erick Jorge Canales-Rodríguez, Maxime Descoteaux, Eleftherios Garyfallidis, Yaniv Gur, Ying-Chia Lin, Merry Mani, Sylvain Merlet, Michael Paquette, Alonso Ramirez-Manzanares, Marco Reisert, Paulo Reis Rodrigues, Farshid Sepehrband, Emmanuel Caruyer, Jeiran Choupan, Rachid Deriche, Mathews Jacob, Gloria Menegaz, Vesna Prckovska, Mariano Rivera, Yves Wiaux, Jean-Philippe Thiran
Quantitative Comparison of Reconstruction Methods for Intra-Voxel Fiber Recovery From Diffusion MRI. IEEE Trans. Medical Imaging 33 (2) (2014)
Eleftherios Garyfallidis, Matthew Brett, Bagrat Amirbekian, Ariel Rokem, Stéfan van der Walt, Maxime Descoteaux, Ian Nimmo-Smith
Dipy, a library for the analysis of diffusion MRI data. Frontiers Neuroinformatics 8 (2014)
Emanuele Olivetti, Thien Bao Nguyen, Eleftherios Garyfallidis, Nivedita Agarwal, Paolo Avesani
Fast Clustering for Interactive Tractography Segmentation. PRNI (2013)
Marc-Alexandre Côté, Gabriel Girard, Arnaud Boré, Eleftherios Garyfallidis, Jean-Christophe Houde, Maxime Descoteaux
Tractometer: Towards validation of tractography pipelines. Medical Image Anal. 17 (7) (2013)
Emanuele Olivetti, Thien Bao Nguyen, Eleftherios Garyfallidis
The Approximation of the Dissimilarity Projection. PRNI (2012)
Vassilis Tsiaras, Panagiotis G. Simos, Roozbeh Rezaie, Bhavin R. Sheth, Eleftherios Garyfallidis, Eduardo M. Castillo, Andrew C. Papanicolaou
Extracting biomarkers of autism from MEG resting-state functional connectivity networks. Comput. Biol. Medicine 41 (12) (2011)