James P. Carson

Publication Activity (10 Years)

Years Active: 2003-2023
Publications (10 Years): 2

Top Topics

Interactive Visual

Gene Expression

Top Venues

J. Comput. Phys.

BMC Medical Imaging

Publications

Soichi Hayashi, Bradley Caron, Anibal Solon Heinsfeld, Sophia Vinci-Booher, Brent C. McPherson, Daniel N. Bullock, Giulia Berto, J. Guiomar Niso, Sandra Hanekamp, Daniel Levitas, Lindsey Kitchell, Josiah Leong, Filipi N. Silva, Serge Koudoro, Hanna Willis, Jasleen Jolly, Derek Pisner, Taylor Zuidema, Jan Kurzwaski, Koulla Mikellidou, Aurore Bussalb, Christopher Rorden, Conner Victory, Dheeraj Bhatia, Dogu Baran Aydogan, Frank C. Yeh, Franco Delogu, Javier Guaje, Jelle Veraart, Jeremy Fischer, Joshua Faskowitz, Maximilien Chaumon, Ricardo Fabrega, David Hunt, Shawn McKee, Shaw T. Brown, Stephanie Heyman, Vittorio Iacovella, Amanda Mejia, Daniele Marinazzo, R. Cameron Craddock, Emanuele Olivetti, Jamie Hanson, Paolo Avesani, Eleftherios Garyfallidis, Daniel Stanzione, James P. Carson, Robert Henschel, David Y. Hancock, Craig A. Stewart, David M. Schnyer, Damian Eke, Russell A. Poldrack, Nathalie George, Holly Bridge, Ilaria Sani, Winrich Freiwald, Aina Puce, Nicholas Port, Franco Pestilli
brainlife.io: A decentralized and open source cloud platform to support neuroscience research. CoRR (2023)
James P. Carson, Monique Y. Rennie, Michael Danilchik, Kent L. Thornburg, Sandra Rugonyi
A chicken embryo cardiac outflow tract atlas for registering changes due to abnormal blood flow. EMBC (2016)
Volodymyr Shcherbatyy, James P. Carson, Murat Yaylaoglu, Katharina Jäckle, Frauke Grabbe, Maren Brockmeyer, Halenur Yavuz, Gregor Eichele
A Digital Atlas of Ion Channel Expression Patterns in the Two-Week-Old Rat Brain. Neuroinformatics 13 (1) (2015)
Mathew Thomas, Matthew J. Marshall, Erin A. Miller, Andrew P. Kuprat, Kerstin Kleese van Dam, James P. Carson
3D imaging of microbial biofilms: Integration of synchrotron imaging and an interactive visualization interface. EMBC (2014)
Richard E. Jacob, James P. Carson
Automated measurement of heterogeneity in CT images of healthy and diseased rat lungs using variogram analysis of an octree decomposition. BMC Medical Imaging 14 (2014)
Lu Liu, Paul K. Commean, Charles Hildebolt, David R. Sinacore, Fred W. Prior, James P. Carson, Ioannis A. Kakadiaris, Tao Ju
Automated, Foot-Bone Registration Using Subdivision-Embedded Atlases for Spatial Mapping of Bone Mineral Density. J. Digit. Imaging 26 (3) (2013)
Andrew P. Kuprat, Senthil Kabilan, James P. Carson, Richard A. Corley, Daniel R. Einstein
A bidirectional coupling procedure applied to multiscale respiratory modeling. J. Comput. Phys. 244 (2013)
James P. Carson, Andrew P. Kuprat, Sean M. Colby, Cassi A. Davis, Christopher A. Basciano, Kevin Greene, John T. Feo, Andrew Kennedy
Detecting distance between injected microspheres and target tumor via 3D reconstruction of tissue sections. EMBC (2012)
Kerstin Kleese van Dam, James P. Carson, Abigail L. Corrigan, Daniel R. Einstein, Zoe Guillen, Brandi Heath, Andrew P. Kuprat, Ingela Lanekoff, Carina Lansing, Julia Laskin, Dongsheng Li, Yan Liu, Matthew J. Marshall, Erin A. Miller, Galya Orr, Paulo Pinheiro da Silva, Seun Ryu, Craig Szymanski, Mathew Thomas
Velo and REXAN - Integrated data management and high speed analysis for experimental facilities. eScience (2012)
Yen H. Le, Uday Kurkure, Nikos Paragios, Tao Ju, James P. Carson, Ioannis A. Kakadiaris
Similarity-Based Appearance-Prior for Fitting a Subdivision Mesh in Gene Expression Images. MICCAI (1) (2012)
Mathew Thomas, Brandi S. Heath, Julia Laskin, Dongsheng Li, Ellen Liu, Katrina Hui, Andrew P. Kuprat, Kerstin Kleese van Dam, James P. Carson
Visualization of high resolution spatial mass spectrometric data during acquisition. EMBC (2012)
Uday Kurkure, Yen H. Le, Nikos Paragios, Tao Ju, James P. Carson, Ioannis A. Kakadiaris
Markov Random Field-based fitting of a subdivision-based geometric atlas. ICCV (2011)
Matthew A. Enlow, Tao Ju, Ioannis A. Kakadiaris, James P. Carson
Lossless 3-D reconstruction and registration of semi-quantitative gene expression data in the mouse brain. EMBC (2011)
Uday Kurkure, Yen H. Le, Nikos Paragios, James P. Carson, Tao Ju, Ioannis A. Kakadiaris
Landmark/image-based deformable registration of gene expression data. CVPR (2011)
James P. Carson, Daniel R. Einstein, Kevin R. Minard, Michelle V. Fanucchi, Christopher D. Wallis, Richard A. Corley
High resolution lung airway cast segmentation with proper topology suitable for computational fluid dynamic simulations. Comput. Medical Imaging Graph. 34 (7) (2010)
Xiangmin Jiao, Daniel R. Einstein, Vladimir Dyedov, James P. Carson
Automatic identification and truncation of boundary outlets in complex imaging-derived biomedical geometries. Medical Biol. Eng. Comput. 47 (9) (2009)
Musodiq Bello, Tao Ju, James P. Carson, Joe D. Warren, Wah Chiu, Ioannis A. Kakadiaris
Learning-Based Segmentation Framework for Tissue Images Containing Gene Expression Data. IEEE Trans. Medical Imaging 26 (5) (2007)
Tao Ju, Joe D. Warren, James P. Carson, Gregor Eichele, Christina Thaller, Wah Chiu, Musodiq Bello, Ioannis A. Kakadiaris
Building 3D surface networks from 2D curve networks with application to anatomical modeling. Vis. Comput. 21 (8-10) (2005)
James P. Carson, Christina Thaller, Musodiq Bello, Wah Chiu, Tao Ju, Joe D. Warren, Ioannis A. Kakadiaris, Gregor Eichele
Data Mining in situ Gene Expression Patterns at Cellular Resolution. CSB Workshops (2005)
Musodiq Bello, Tao Ju, Joe D. Warren, James P. Carson, Wah Chiu, Christina Thaller, Gregor Eichele, Ioannis A. Kakadiaris
Hybrid Segmentation Framework for Tissue Images Containing Gene Expression Data. MICCAI (2005)
James P. Carson, Tao Ju, Christina Thaller, Musodiq Bello, Joe D. Warren, Gregor Eichele, Wah Chiu
Data Mining in situ Gene Expression Patterns at Cellular Resolution. CSB Workshops (2005)
James P. Carson, Tao Ju, Hui-Chen Lu, Christina Thaller, Mei Xu, Sarah L. Pallas, Michael C. Crair, Joe D. Warren, Wah Chiu, Gregor Eichele
A Digital Atlas to Characterize the Mouse Brain Transcriptome. PLoS Comput. Biol. 1 (4) (2005)
Ioannis A. Kakadiaris, Musodiq Bello, Shiva Arunachalam, Wei Kang, Tao Ju, Joe D. Warren, James P. Carson, Wah Chiu, Christina Thaller, Gregor Eichele
Landmark-Driven, Atlas-Based Segmentation of Mouse Brain Tissue Images Containing Gene Expression Data. MICCAI (1) (2004)
Joe D. Warren, Tao Ju, Gregor Eichele, Christina Thaller, Wah Chiu, James P. Carson
A geometric database for gene expression data. Symposium on Geometry Processing (2003)