Alexandra Badea

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 10

Top Topics

Magnetic Resonance

Diffusion Tensor Mri

Top Venues

Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging

Frontiers Neuroinformatics

Publications

Cencheng Shen, Shangsi Wang, Alexandra Badea, Carey E. Priebe, Joshua T. Vogelstein
Discovering the signal subgraph: An iterative screening approach on graphs. Pattern Recognit. Lett. 184 (2024)
Eric W. Bridgeford, Jaewon Chung, Brian Gilbert, Sambit Panda, Adam Li, Cencheng Shen, Alexandra Badea, Brian Caffo, Joshua T. Vogelstein
Learning sources of variability from high-dimensional observational studies. CoRR (2023)
Alex J. Allphin, Darin P. Clark, Alexandra Badea, Cristian T. Badea
Anatomical and functional cardiac PCCT imaging pipeline for characterization of Apolipoprotein E mouse models. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2022)
Matthew D. Holbrook, Stephanie J. Blocker, Yvonne M. Mowery, Alexandra Badea, Yi Qi, David G. Kirsch, Cristian T. Badea
MRI-based radiomics of sarcomas in the preclinical arm of a co-clinical trial. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2020)
Runze Tang, Michael D. Ketcha, Alexandra Badea, Evan D. Calabrese, Daniel S. Margulies, Joshua T. Vogelstein, Carey E. Priebe, Daniel L. Sussman
Connectome Smoothing via Low-Rank Approximations. IEEE Trans. Medical Imaging 38 (6) (2019)
Alexandra Badea, Wenlin Wu, Jordan Shuff, Michele Wang, Robert J. Anderson, Yi Qi, G. Allan Johnson, Joan G. Wilson, Serge Koudoro, Eleftherios Garyfallidis, Carol A. Colton, David B. Dunson
Identifying Vulnerable Brain Networks in Mouse Models of Genetic Risk Factors for Late Onset Alzheimer's Disease. Frontiers Neuroinformatics 13 (2019)
Robert J. Anderson, James J. Cook, Natalie A. Delpratt, John C. Nouls, Bin Gu, James O. McNamara, Brian B. Avants, G. Allan Johnson, Alexandra Badea
Small Animal Multivariate Brain Analysis (SAMBA) - a High Throughput Pipeline with a Validation Framework. Neuroinformatics 17 (3) (2019)
Robert J. Anderson, James J. Cook, Natalie A. Delpratt, John C. Nouls, Bin Gu, James O. McNamara, Brian B. Avants, G. Allan Johnson, Alexandra Badea
An HPC Pipeline with Validation Framework for Small Animal Multivariate Brain Analysis (SAMBA). CoRR (2017)
G. Allan Johnson, Robert J. Anderson, James J. Cook, Christopher Long, Alexandra Badea
Image-processing pipelines: applications in magnetic resonance histology. Medical Imaging: Image Processing (2016)
Alexandra Badea, Lauren Kane, Robert J. Anderson, Yi Qi, Mark Foster, Gary P. Cofer, Neil Medvitz, Anne F. Buckley, Andreas K. Badea, William C. Wetsel, Carol A. Colton
The fornix provides multiple biomarkers to characterize circuit disruption in a mouse model of Alzheimer's disease. NeuroImage 142 (2016)
Evan Calabrese, Alexandra Badea, Christopher L. Coe, Gabriele R. Lubach, Yundi Shi, Martin Andreas Styner, G. Allan Johnson
A diffusion tensor MRI atlas of the postmortem rhesus macaque brain. NeuroImage 117 (2015)
Evan Calabrese, Alexandra Badea, Charles Watson, G. Allan Johnson
A quantitative magnetic resonance histology atlas of postnatal rat brain development with regional estimates of growth and variability. NeuroImage 71 (2013)
Darin P. Clark, Alexandra Badea, G. Allan Johnson, Cristian T. Badea
Constructing a 4D murine cardiac micro-CT atlas for automated segmentation and phenotyping applications. Medical Imaging: Image Processing (2013)
G. Allan Johnson, Evan Calabrese, Alexandra Badea, George Paxinos, Charles Watson
A multidimensional magnetic resonance histology atlas of the Wistar rat brain. NeuroImage 62 (3) (2012)
Alexandra Badea, Sally L. Gewalt, Brian B. Avants, James J. Cook, G. Allan Johnson
Quantitative mouse brain phenotyping based on single and multispectral MR protocols. NeuroImage 63 (3) (2012)
Teresa Wu, Min Hyeok Bae, Min Zhang, Rong Pan, Alexandra Badea
A prior feature SVM-MRF based method for mouse brain segmentation. NeuroImage 59 (3) (2012)
G. Allan Johnson, Alexandra Badea, Jeffrey Brandenburg, Gary P. Cofer, Boma Fubara, Song Liu, Jonathan Nissanov
Waxholm Space: An image-based reference for coordinating mouse brain research. NeuroImage 53 (2) (2010)
Alexandra Badea, G. Allan Johnson, Joanna L. Jankowsky
Remote sites of structural atrophy predict later amyloid formation in a mouse model of Alzheimer's disease. NeuroImage 50 (2) (2010)
Min Hyeok Bae, Rong Pan, Teresa Wu, Alexandra Badea
Automated segmentation of mouse brain images using extended MRF. NeuroImage 46 (3) (2009)
Alexandra Badea, G. Allan Johnson, Robert W. Williams
Genetic dissection of the mouse brain using high-field magnetic resonance microscopy. NeuroImage 45 (4) (2009)
Anjum A. Sharief, Alexandra Badea, Anders M. Dale, G. Allan Johnson
Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy. NeuroImage 39 (1) (2008)
Alexandra Badea, Peter Nicholls, G. Allan Johnson, William C. Wetsel
Neuroanatomical phenotypes in the Reeler mouse. NeuroImage 34 (4) (2007)
Alexandra Badea, A. A. Ali-Sharief, G. Allan Johnson
Morphometric analysis of the C57BL/6J mouse brain. NeuroImage 37 (3) (2007)
G. Allan Johnson, Anjum Ali-Sharief, Alexandra Badea, Jeffrey Brandenburg, Gary P. Cofer, Boma Fubara, Sally L. Gewalt, Laurence W. Hedlund, Lucy Upchurch
High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology. NeuroImage 37 (1) (2007)
Anjum A. Sharief, Anders M. Dale, Alexandra Badea, G. Allan Johnson
Automated segmentation of neuroanatomical structures in multispectral MR microscopy of the mouse brain. NeuroImage 27 (2) (2005)