Marco Reisert

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 26

Top Venues

NeuroImage

CoRR

IEEE Trans. Medical Imaging

Int. J. Comput. Assist. Radiol. Surg.

University of Freiburg, Freiburg im Breisgau, Germany (PHD)

Education History

University of Freiburg, Freiburg im Breisgau, Germany

PHD

Publications

Tugba Akinci D'Antonoli, Lucas K. Berger, Ashraya K. Indrakanti, Nathan Vishwanathan, Jakob Weiß, Matthias Jung, Zeynep Berkarda, Alexander Rau, Marco Reisert, Thomas Küstner, Alexandra Walter, Elmar M. Merkle, Martin Segeroth, Joshy Cyriac, Shan Yang, Jakob Wasserthal
TotalSegmentator MRI: Sequence-Independent Segmentation of 59 Anatomical Structures in MR images. CoRR (2024)
Robert Graf, Paul-Sören Platzek, Evamaria Olga Riedel, Constanze Ramschütz, Sophie Starck, Hendrik Kristian Möller, Matan Atad, Henry Völzke, Robin Bülow, Carsten Oliver Schmidt, Julia Rüdebusch, Matthias Jung, Marco Reisert, Jakob Weiss, Maximilian Löffler, Fabian Bamberg, Bene Wiestler, Johannes C. Paetzold, Daniel Rueckert, Jan Stefan Kirschke
TotalVibeSegmentator: Full Torso Segmentation for the NAKO and UK Biobank in Volumetric Interpolated Breath-hold Examination Body Images. CoRR (2024)
Suam Kim, Philipp Rebmann, Phuong Hien Tran, Elias Kellner, Marco Reisert, David Steybe, Jörg Bayer, Fabian Bamberg, Elmar Kotter, Maximilian Frederik Russe
Multiclass datasets expand neural network utility: an example on ankle radiographs. Int. J. Comput. Assist. Radiol. Surg. 18 (5) (2023)
Henrik Skibbe, Michal Byra, Akiya Watakabe, Tetsuo Yamamori, Marco Reisert
PatchMorph: A Stochastic Deep Learning Approach for Unsupervised 3D Brain Image Registration with Small Patches. CoRR (2023)
Marco Reisert, Maximilian Frederik Russe, Samer Elsheikh, Elias Kellner, Henrik Skibbe
Deep Neural Patchworks: Coping with Large Segmentation Tasks. CoRR (2022)
Cornelius Weiller, Marco Reisert, Volkmar Glauche, Mariachristina Musso, Michel Rijntjes
The dual-loop model for combining external and internal worlds in our brain. NeuroImage 263 (2022)
David Steybe, Philipp Poxleitner, Marc Christian Metzger, Leonard Simon Brandenburg, Rainer Schmelzeisen, Fabian Bamberg, Phuong Hien Tran, Elias Kellner, Marco Reisert, Maximilian Frederik Russe
Automated segmentation of head CT scans for computer-assisted craniomaxillofacial surgery applying a hierarchical patch-based stack of convolutional neural networks. Int. J. Comput. Assist. Radiol. Surg. 17 (11) (2022)
Lidia Konopleva, Kamil A. Il'yasov, Shi Jia Teo, Volker A. Coenen, Christoph P. Kaller, Marco Reisert
Robust intra-individual estimation of structural connectivity by Principal Component Analysis. NeuroImage 226 (2021)
Cornelius Weiller, Marco Reisert, Ivo Peto, Jürgen Hennig, Nikos Makris, Michael Petrides, Michel Rijntjes, Karl Egger
The ventral pathway of the human brain: A continuous association tract system. NeuroImage 234 (2021)
Marco Reisert, Cornelius Weiller, Jonas A. Hosp
Displaying the autonomic processing network in humans - a global tractography approach. NeuroImage 231 (2021)
Bibek Dhital, Marco Reisert, Elias Kellner, Valerij G. Kiselev
Intra-axonal diffusivity in brain white matter. NeuroImage 189 (2019)
Henrik Skibbe, Marco Reisert, Ken Nakae, Akiya Watakabe, Junichi Hata, Hiroaki Mizukami, Hideyuki Okano, Tetsuo Yamamori, Shin Ishii
PAT - Probabilistic Axon Tracking for Densely Labeled Neurons in Large 3-D Micrographs. IEEE Trans. Medical Imaging 38 (1) (2019)
Andreas Horn, Ningfei Li, Till Anselm Dembek, Ari Kappel, Chadwick B. Boulay, Siobhan Ewert, Anna Tietze, Andreas Husch, Thushara Perera, Wolf-Julian Neumann, Marco Reisert, Hang Si, Robert Oostenveld, Christopher Rorden, Fang-Cheng Yeh, Qianqian Fang, Todd M. Herrington, Johannes Vorwerk, Andrea A. Kühn
Lead-DBS v2: Towards a comprehensive pipeline for deep brain stimulation imaging. NeuroImage 184 (2019)
Marco Reisert, Volker A. Coenen, Christoph P. Kaller, Karl Egger, Henrik Skibbe
HAMLET: Hierarchical Harmonic Filters for Learning Tracts from Diffusion MRI. CoRR (2018)
Bibek Dhital, Elias Kellner, Valerij G. Kiselev, Marco Reisert
The absence of restricted water pool in brain white matter. NeuroImage 182 (2018)
Lidia Konopleva, Kamil A. Il'yasov, Henrik Skibbe, Valerij G. Kiselev, Elias Kellner, Bibek Dhital, Marco Reisert
Modelfree global tractography. NeuroImage 174 (2018)
Lena V. Schumacher, Marco Reisert, Kai Nitschke, Karl Egger, Horst Urbach, Jürgen Hennig, Cornelius Weiller, Christoph P. Kaller
Probing the reproducibility of quantitative estimates of structural connectivity derived from global tractography. NeuroImage 175 (2018)
Henrik Skibbe, Marco Reisert
Spherical Tensor Algebra: A Toolkit for 3D Image Processing. J. Math. Imaging Vis. 58 (3) (2017)
Dmitry Kurzhunov, Robert Borowiak, Marco Reisert, Axel Joachim Krafft, Ali Caglar Özen, Michael Bock
O MRI: Comparison of conventional and proton-constrained reconstructions. NeuroImage 155 (2017)
Marco Reisert, Elias Kellner, Bibek Dhital, Jürgen Hennig, Valerij G. Kiselev
Disentangling micro from mesostructure by diffusion MRI: A Bayesian approach. NeuroImage 147 (2017)
Neele S. Hübner, Anna E. Mechling, Hsu-Lei Lee, Marco Reisert, Thomas Bienert, Jürgen Hennig, Dominik von Elverfeldt, Laura-Adela Harsan
The connectomics of brain demyelination: Functional and structural patterns in the cuprizone mouse model. NeuroImage 146 (2017)
Karl Egger, P. Janz, M. D. Döbrössy, Thomas Bienert, Marco Reisert, Markus Obmann, Volkmar Glauche, C. Haas, Laura-Adela Harsan, Horst Urbach, Dominik von Elverfeldt
Microstructural effects of a neuro-modulating drug evaluated by diffusion tensor imaging. NeuroImage 127 (2016)
Marco Reisert, B. Dihtal, Elias Kellner, Henrik Skibbe, Christoph P. Kaller
Symmetric Wiener Processes for Probabilistic Tractography and Connectivity Estimation. MICCAI (1) (2015)
Daan Christiaens, Marco Reisert, Thijs Dhollander, Stefan Sunaert, Paul Suetens, Frederik Maes
Global tractography of multi-shell diffusion-weighted imaging data using a multi-tissue model. NeuroImage 123 (2015)
Elias Kellner, Bibek Dhital, Marco Reisert
Gibbs-Ringing Artifact Removal Based on Local Subvoxel-shifts. CoRR (2015)
Henrik Skibbe, Marco Reisert, Shin-ichi Maeda, Masanori Koyama, Shigeyuki Oba, Kei Ito, Shin Ishii
Efficient Monte Carlo Image Analysis for the Location of Vascular Entity. IEEE Trans. Medical Imaging 34 (2) (2015)
Henrik Skibbe, Marco Reisert, Shin Ishii
Efficient Metropolis-Hasting Image Analysis for the Location of Vascular Entity. GCPR (2014)
Alessandro Daducci, Erick Jorge Canales-Rodríguez, Maxime Descoteaux, Eleftherios Garyfallidis, Yaniv Gur, Ying-Chia Lin, Merry Mani, Sylvain Merlet, Michael Paquette, Alonso Ramirez-Manzanares, Marco Reisert, Paulo Reis Rodrigues, Farshid Sepehrband, Emmanuel Caruyer, Jeiran Choupan, Rachid Deriche, Mathews Jacob, Gloria Menegaz, Vesna Prckovska, Mariano Rivera, Yves Wiaux, Jean-Philippe Thiran
Quantitative Comparison of Reconstruction Methods for Intra-Voxel Fiber Recovery From Diffusion MRI. IEEE Trans. Medical Imaging 33 (2) (2014)
Esmeralda Ruiz Pujadas, Marco Reisert
Shape-Based Normalized Cuts Using Spectral Relaxation for Biomedical Segmentation. IEEE Trans. Image Process. 23 (1) (2014)
Marco Reisert, Valerij G. Kiselev, Bibek Dhital, Elias Kellner, Dmitry S. Novikov
MesoFT: Unifying Diffusion Modelling and Fiber Tracking. MICCAI (3) (2014)
Andreas Horn, Dirk Ostwald, Marco Reisert, Felix Blankenburg
The structural-functional connectome and the default mode network of the human brain. NeuroImage 102 (2014)
Marco Reisert, Henrik Skibbe
Fiber Continuity Based Spherical Deconvolution in Spherical Harmonic Domain. MICCAI (3) (2013)
Esmeralda Ruiz Pujadas, Marco Reisert
Image segmentation using normalized cuts with multiple priors. Medical Imaging: Image Processing (2013)
Marco Reisert, Henrik Skibbe, Valerij G. Kiselev
The Diffusion Dictionary in the Human Brain Is Short: Rotation Invariant Learning of Basis Functions. CDMRI/MMBC@MICCAI (2013)
Henrik Skibbe, Marco Reisert
Rotation Covariant Image Processing for Biomedical Applications. Comput. Math. Methods Medicine 2013 (2013)
Marco Reisert, Irina Mader, Roza Umarova, Simon Maier, Ludger Tebartz van Elst, Valerij G. Kiselev
Fiber density estimation from single q-shell diffusion imaging by tensor divergence. NeuroImage 77 (2013)
Jakob Assländer, Benjamin Zahneisen, Thimo Hugger, Marco Reisert, Hsu-Lei Lee, Pierre LeVan, Jürgen Hennig
Single shot whole brain imaging using spherical stack of spirals trajectories. NeuroImage 73 (2013)
Esmeralda Ruiz Pujadas, Marco Reisert, Li Bai
Non-euclidean basis function based level set segmentation with statistical shape prior. EMBC (2013)
Lingyu Ma, Marco Reisert, Hans Burkhardt
RENNSH: A Novel ά-Helix Identification Approach for Intermediate Resolution Electron Density Maps. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (1) (2012)
Peter F. Neher, Bram Stieltjes, Marco Reisert, Ignaz Reicht, Hans-Peter Meinzer, Klaus H. Fritzsche
MITK global tractography. Medical Imaging: Image Processing (2012)
Marco Reisert, Elias Kellner, Valerij G. Kiselev
About the Geometry of Asymmetric Fiber Orientation Distributions. IEEE Trans. Medical Imaging 31 (6) (2012)
Henrik Skibbe, Marco Reisert, Thorsten Schmidt, Thomas Brox, Olaf Ronneberger, Hans Burkhardt
Fast Rotation Invariant 3D Feature Computation Utilizing Efficient Local Neighborhood Operators. IEEE Trans. Pattern Anal. Mach. Intell. 34 (8) (2012)
Peter F. Neher, Bram Stieltjes, Marco Reisert, Ignaz Reicht, Hans-Peter Meinzer, Klaus H. Fritzsche
Integration eines globalen Traktographieverfahrens in das Medical Imaging Interaction Toolkit. Bildverarbeitung für die Medizin (2012)
Henrik Skibbe, Marco Reisert
Circular Fourier-HOG features for rotation invariant object detection in biomedical images. ISBI (2012)
Marco Reisert, Henrik Skibbe
Left-Invariant Diffusion on the Motion Group in terms of the Irreducible Representations of SO(3) CoRR (2012)
Marco Reisert, Henrik Skibbe, Valerij G. Kiselev
Fiber Density Estimation by Tensor Divergence. MICCAI (2) (2012)
Lingyu Ma, Marco Reisert, Christophe Wirth, Carola Hunte, Olaf Ronneberger, Hans Burkhardt
Alpha helix prediction based on Metropolis-Hastings sampling. ISBI (2011)
Henrik Skibbe, Marco Reisert, Hans Burkhardt
SHOG - Spherical HOG Descriptors for Rotation Invariant 3D Object Detection. DAGM-Symposium (2011)
Henrik Skibbe, Marco Reisert, Hans Burkhardt
Gaussian Neighborhood Descriptors for Brain Segmentation. MVA (2011)
Henrik Skibbe, Marco Reisert, Olaf Ronneberger, Hans Burkhardt
Spherical Bessel Filter for 3D object detection. ISBI (2011)
Pierre Fillard, Maxime Descoteaux, Alvina Goh, Sylvain Gouttard, Ben Jeurissen, James Malcolm, Alonso Ramirez-Manzanares, Marco Reisert, Ken E. Sakaie, Fatima Tensaouti, Ting Yo, Jean-François Mangin, Cyril Poupon
Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom. NeuroImage 56 (1) (2011)
Marco Reisert, Henrik Skibbe
Steerable Deconvolution Feature Detection as an Inverse Problem. DAGM-Symposium (2011)
Marco Reisert, Valerij G. Kiselev
Diffusion propagator imaging by model-driven regularization. GI-Jahrestagung (2011)
Marco Reisert, Irina Mader, Constantin Anastasopoulos, Matthias Weigel, Susanne Schnell, Valerij G. Kiselev
Global fiber reconstruction becomes practical. NeuroImage 54 (2) (2011)
Marco Reisert, Valerij G. Kiselev
Fiber Continuity: An Anisotropic Prior for ODF Estimation. IEEE Trans. Medical Imaging 30 (6) (2011)
Henrik Skibbe, Marco Reisert
Dense rotation invariant brain pyramids for automated human brain parcellation. GI-Jahrestagung (2011)
Matthias Schlachter, Marco Reisert, Corinna Herz, Fabienne Schlurmann, Silke Lassmann, Martin Werner, Hans Burkhardt, Olaf Ronneberger
Harmonic Filters for 3D Multichannel Data: Rotation Invariant Detection of Mitoses in Colorectal Cancer. IEEE Trans. Medical Imaging 29 (8) (2010)
Henrik Skibbe, Marco Reisert, Thorsten Schmidt, Klaus Palme, Olaf Ronneberger, Hans Burkhardt
3D Object Detection Using a Fast Voxel-Wise Local Spherical Fourier Tensor Transformation. DAGM-Symposium (2010)
Lazaros Mavridis, Vishwesh Venkatraman, David W. Ritchie, Naoto Morikawa, Rumen Andonov, Alexandre Cornu, Noël Malod-Dognin, Jacques Nicolas, Maja Temerinac-Ott, Marco Reisert, Hans Burkhardt, Apostolos Axenopoulos, Petros Daras
SHREC'10 Track: Protein Model Classification. 3DOR@Eurographics (2010)
Janis Fehr, Marco Reisert, Hans Burkhardt
Cross-Correlation and Rotation Estimation of Local 3D Vector Field Patches. ISVC (1) (2009)
Alexander Schneider, Jürgen Sturm, Cyrill Stachniss, Marco Reisert, Hans Burkhardt, Wolfram Burgard
Object identification with tactile sensors using bag-of-features. IROS (2009)
Henrik Skibbe, Marco Reisert, Olaf Ronneberger, Hans Burkhardt
Increasing the Dimension of Creativity in Rotation Invariant Feature Design Using 3D Tensorial Harmonics. DAGM-Symposium (2009)
Marco Reisert, Hans Burkhardt
Harmonic Filters for Generic Feature Detection in 3D. DAGM-Symposium (2009)
Henrik Skibbe, Qing Wang, Olaf Ronneberger, Hans Burkhardt, Marco Reisert
Fast computation of 3D spherical Fourier harmonic descriptors - a complete orthonormal basis for a rotational invariant representation of three-dimensional objects. ICCV Workshops (2009)
Marco Reisert, Hans Burkhardt
Equivariant Holomorphic Filters for Contour Denoising and Rapid Object Detection. IEEE Trans. Image Process. 17 (2) (2008)
Marco Reisert, Hans Burkhardt
Efficient Tensor Voting with 3D tensorial harmonics. CVPR Workshops (2008)
Marco Reisert
Group Integration Techniques in Pattern Analysis - A Kernel View. Ausgezeichnete Informatikdissertationen (2008)
Marco Reisert, Hans Burkhardt
Complex Derivative Filters. IEEE Trans. Image Process. 17 (12) (2008)
Janis Fehr, Marco Reisert, Hans Burkhardt
Fast and Accurate Rotation Estimation on the 2-Sphere without Correspondences. ECCV (2) (2008)
Marco Reisert, Olaf Ronneberger, Hans Burkhardt
A Fast and Reliable Coin Recognition System. DAGM-Symposium (2007)
Marco Reisert, Hans Burkhardt
Learning Equivariant Functions with Matrix Valued Kernels. J. Mach. Learn. Res. 8 (2007)
Marco Reisert, Olaf Ronneberger, Hans Burkhardt
Holomorphic Filters for Object Detection. DAGM-Symposium (2007)
Maja Temerinac, Marco Reisert, Hans Burkhardt
Invariant features for searching in protein fold databases. Int. J. Comput. Math. 84 (5) (2007)
Marco Reisert, Hans Burkhardt
Using Irreducible Group Representations for Invariant 3D Shape Description. DAGM-Symposium (2006)
Marco Reisert, Hans Burkhardt
Invariant Features for 3D-Data based on Group Integration using Directional Information and Spherical Harmonic Expansion. ICPR (4) (2006)
Marco Reisert, Hans Burkhardt
Feature Selection for Retrieval Purposes. ICIAR (1) (2006)
Marco Reisert, Hans Burkhardt
Second order 3D shape features: An exhaustive study. Comput. Graph. 30 (2) (2006)
Hans Burkhardt, Marco Reisert, Hongdong Li
Invariants for Discrete Structures ? An Extension of Haar Integrals over Transformation Groups to Dirac Delta Functions. DAGM-Symposium (2004)

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Publication Activity (10 Years)

Top Topics

Top Venues

Marco Reisert