Stuart Owen

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 5

Top Topics

High Throughput

Systems Biology

Top Venues

Nucleic Acids Res.

Future Gener. Comput. Syst.

Publications

Carole A. Goble, Finn Bacall, Stian Soiland-Reyes, Stuart Owen, Ignacio Eguinoa, Bert Droesbeke, Hervé Ménager, Laura Rodríguez-Navas, José María Fernández, Björn A. Grüning, Simone Leo, Luca Pireddu, Michael R. Crusoe, Johan Gustafsson, Salvador Capella-Gutiérrez, Frederik Coppens
The EOSC-Life Workflow Collaboratory for the Life Sciences. CoRDI (2023)
Alex R. Hardisty, Paul Brack, Carole A. Goble, Laurence Livermore, Ben Scott, Quentin Groom, Stuart Owen, Stian Soiland-Reyes
The Specimen Data Refinery: A Canonical Workflow Framework and FAIR Digital Object Approach to Speeding up Digital Mobilisation of Natural History Collections. Data Intell. 4 (2) (2022)
Paul Brack, Peter Crowther, Stian Soiland-Reyes, Stuart Owen, Douglas Lowe, Alan R. Williams, Quentin Groom, Mathias Dillen, Frederik Coppens, Björn A. Grüning, Ignacio Eguinoa, Philip Ewels, Carole A. Goble
Ten simple rules for making a software tool workflow-ready. PLoS Comput. Biol. 18 (3) (2022)
Katherine Wolstencroft, Olga Krebs, Jacky L. Snoep, Natalie J. Stanford, Finn Bacall, Martin Golebiewski, Rostyk Kuzyakiv, Quyen Nguyen, Stuart Owen, Stian Soiland-Reyes, Jakub Straszewski, David D. van Niekerk, Alan R. Williams, Lars Malmström, Bernd Rinn, Wolfgang Müller, Carole A. Goble
FAIRDOMHub: a repository and collaboration environment for sharing systems biology research. Nucleic Acids Res. 45 (Database-Issue) (2017)
Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Rostyk Kuzyakiv, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble
FAIRDOM approach for semantic interoperability of systems biology data and models. ODLS (2016)
Katherine Wolstencroft, Stuart Owen, Olga Krebs, Quyen Nguyen, Natalie J. Stanford, Martin Golebiewski, Andreas Weidemann, Meik Bittkowski, Lihua An, David Shockley, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble
SEEK: a systems biology data and model management platform. BMC Syst. Biol. 9 (2015)
Olga Krebs, Katy Wolstencroft, Natalie J. Stanford, Norman Morrison, Martin Golebiewski, Stuart Owen, Quyen Nguyen, Jacky L. Snoep, Wolfgang Müller, Carole A. Goble
FAIRDOM approach for semantic interoperability of systems biology data and models. ICBO (2015)
Katherine Wolstencroft, Stuart Owen, Matthew Horridge, Simon Jupp, Olga Krebs, Jacky L. Snoep, Franco B. du Preez, Wolfgang Müller, Robert Stevens, Carole A. Goble
Stealthy annotation of experimental biology by spreadsheets. Concurr. Comput. Pract. Exp. 25 (4) (2013)
Sean Bechhofer, Iain E. Buchan, David De Roure, Paolo Missier, John D. Ainsworth, Jiten Bhagat, Philip A. Couch, Don Cruickshank, Mark Delderfield, Ian Dunlop, Matthew Gamble, Danius T. Michaelides, Stuart Owen, David R. Newman, Shoaib Sufi, Carole A. Goble
Why linked data is not enough for scientists. Future Gener. Comput. Syst. 29 (2) (2013)
Katherine Wolstencroft, Robert Haines, Donal Fellows, Alan R. Williams, David Withers, Stuart Owen, Stian Soiland-Reyes, Ian Dunlop, Aleksandra Nenadic, Paul Fisher, Jiten Bhagat, Khalid Belhajjame, Finn Bacall, Alex R. Hardisty, Abraham Nieva de la Hidalga, Maria P. Balcazar Vargas, Shoaib Sufi, Carole A. Goble
The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Katherine Wolstencroft, Stuart Owen, Olga Krebs, Wolfgang Müller, Quyen Nguyen, Jacky L. Snoep, Carole A. Goble
Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform. ISWC (2) (2013)
Katherine Wolstencroft, Stuart Owen, Carole A. Goble, Quyen Nguyen, Olga Krebs, Wolfgang Müller
RightField: Semantic enrichment of Systems Biology data using spreadsheets. eScience (2012)
Katy Wolstencroft, Stuart Owen, Matthew Horridge, Wolfgang Müller, Finn Bacall, Jacky L. Snoep, Franco B. du Preez, Quyen Nguyen, Olga Krebs, Carole A. Goble
RightField: Scientific Knowledge Acquisition by Stealth through Ontology-Enabled Spreadsheets. EKAW (2012)
Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Katy Wolstencroft, Robert Stevens
Populous: a tool for building OWL ontologies from templates. BMC Bioinform. 13 (S-1) (2012)
Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Katy Wolstencroft, Robert Stevens
Populous: A Tool for Populating an Ontology. ICBO (2011)
Katy Wolstencroft, Stuart Owen, Matthew Horridge, Olga Krebs, Wolfgang Müller, Jacky L. Snoep, Franco B. du Preez, Carole A. Goble
RightField: embedding ontology annotation in spreadsheets. Bioinform. 27 (14) (2011)
Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. J. Biomed. Semant. 1 (2010)
Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft
Populous: A Tool for Populating Templates for OWL Ontologies. SWAT4LS (2010)
Sean Bechhofer, John D. Ainsworth, Jiten Bhagat, Iain E. Buchan, Philip A. Couch, Don Cruickshank, David De Roure, Mark Delderfield, Ian Dunlop, Matthew Gamble, Carole A. Goble, Danius T. Michaelides, Paolo Missier, Stuart Owen, David R. Newman, Shoaib Sufi
Why Linked Data is Not Enough for Scientists. eScience (2010)
Simon Jupp, Matthew Horridge, Luigi Iannone, Julie Klein, Stuart Owen, Joost Schanstra, Robert Stevens, Katy Wolstencroft
Populous: A tool for populating ontology templates CoRR (2010)
Paolo Missier, Stian Soiland-Reyes, Stuart Owen, Wei Tan, Aleksandra Nenadic, Ian Dunlop, Alan R. Williams, Tom Oinn, Carole A. Goble
Taverna, Reloaded. SSDBM (2010)
Katy Wolstencroft, Matthew Horridge, Stuart Owen, Wolfgang Müller, Finn Bacall, Jacky L. Snoep, Olga Krebs, Carole A. Goble
Rightfield: Embedding Ontology Term Selection into Spreadsheets for the Annotation of Biological Data. ISWC (Posters & Demos) (2010)
Peter Li, Juan I. Castrillo, Giles Velarde, Ingo Wassink, Stian Soiland-Reyes, Stuart Owen, David Withers, Tom Oinn, Matthew R. Pocock, Carole A. Goble, Stephen G. Oliver, Douglas B. Kell
Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data. BMC Bioinform. 9 (2008)