Nathalie Reuter

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 9

Top Topics

Protein Sequences

Visual Exploration

Subcellular Localization

Surface Properties

Top Venues

PLoS Comput. Biol.

J. Chem. Inf. Model.

Nucleic Acids Res.

Publications

Parveen Gartan, Fahimeh Khorsand, Pushpak Mizar, Juha Ilmari Vahokovski, Luis F. Cervantes, Bengt Erik Haug, Ruth Brenk, Charles L. Brooks III, Nathalie Reuter
Investigating Polypharmacology through Targeting Known Human Neutrophil Elastase Inhibitors to Proteinase 3. J. Chem. Inf. Model. 64 (3) (2024)
Emmanuel E. Moutoussamy, Qaiser Waheed, Greta J. Binford, Hanif M. Khan, Shane M. Moran, Anna R. Eitel, Matthew H. J. Cordes, Nathalie Reuter
Specificity of Loxosceles α clade phospholipase D enzymes for choline-containing lipids: Role of a conserved aromatic cage. PLoS Comput. Biol. 18 (2) (2022)
Thibault Tubiana, Ian Sillitoe, Christine A. Orengo, Nathalie Reuter
Dissecting peripheral protein-membrane interfaces. PLoS Comput. Biol. 18 (12) (2022)
Mihaly Varadi, Stephen Anyango, David R. Armstrong, John M. Berrisford, Preeti Choudhary, Mandar S. Deshpande, Nurul Nadzirin, Sreenath Nair, Lukás Pravda, Ahsan Tanweer, Bissan Al-Lazikani, Claudia Andreini, Geoffrey J. Barton, David Bednar, Karel Berka, Tom L. Blundell, Kelly Brock, José María Carazo, Jirí Damborský, Alessia David, Sucharita Dey, Roland L. Dunbrack Jr., Juan Fernández-Recio, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Thomas A. Hopf, David Jakubec, Natarajan Kannan, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Nir London, José Ramón Macías, Mallur Srivatsan Madhusudhan, Debora S. Marks, Lennart Martens, Stuart A McGowan, Jake E. McGreig, Vivek Modi, R. Gonzalo Parra, Gerardo Pepe, Damiano Piovesan, Jaime Prilusky, Valeria Putignano, Leandro G. Radusky, Pathmanaban Ramasamy, Atilio O. Rausch, Nathalie Reuter, Luis A. Rodriguez, Nathan J. Rollins, Antonio Rosato, Pawel Rubach, Luis Serrano, Gulzar Singh, Petr Skoda, Carlos Oscar Sánchez Sorzano, Jan Stourac, Joanna I. Sulkowska, Radka Svobodová Vareková, Natalia Tichshenko, Silvio C. E. Tosatto, Wim F. Vranken, Mark N. Wass, Dandan Xue, Daniel Zaidman, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar
PDBe-KB: collaboratively defining the biological context of structural data. Nucleic Acids Res. 50 (D1) (2022)
Emmanuel E. Moutoussamy, Hanif M. Khan, Mary F. Roberts, Anne Gershenson, Christophe Chipot, Nathalie Reuter
Standard Binding Free Energy and Membrane Desorption Mechanism for a Phospholipase C. J. Chem. Inf. Model. 62 (24) (2022)
Bojan Krtenic, Adrian Drazic, Thomas Arnesen, Nathalie Reuter
Classification and phylogeny for the annotation of novel eukaryotic GNAT acetyltransferases. PLoS Comput. Biol. 16 (12) (2020)
Pierre Bedoucha, Nathalie Reuter, Helwig Hauser, Jan Byska
Visual exploration of large normal mode spaces to study protein flexibility. Comput. Graph. 90 (2020)
Edvin Fuglebakk, Nathalie Reuter
A model for hydrophobic protrusions on peripheral membrane proteins. PLoS Comput. Biol. 14 (7) (2018)
Sandhya P. Tiwari, Nathalie Reuter
Similarity in Shape Dictates Signature Intrinsic Dynamics Despite No Functional Conservation in TIM Barrel Enzymes. PLoS Comput. Biol. 12 (3) (2016)
Sandhya P. Tiwari, Edvin Fuglebakk, Siv Midtun Hollup, Lars Skjærven, Tristan Cragnolini, Svenn Helge Grindhaug, Kidane M. Tekle, Nathalie Reuter
WEBnm@ v2.0: Web server and services for comparing protein flexibility. BMC Bioinform. 15 (2014)
Július Parulek, Cagatay Turkay, Nathalie Reuter, Ivan Viola
Visual cavity analysis in molecular simulations. BMC Bioinform. 14 (S-19) (2013)
Július Parulek, Cagatay Turkay, Nathalie Reuter, Ivan Viola
Implicit surfaces for interactive graph based cavity analysis of molecular simulations. BioVis (2012)
Edvin Fuglebakk, Julian Echave, Nathalie Reuter
Measuring and comparing structural fluctuation patterns in large protein datasets. Bioinform. 28 (19) (2012)
Cagatay Turkay, Július Parulek, Nathalie Reuter, Helwig Hauser
Integrating cluster formation and cluster evaluation in interactive visual analysis. SCC (2011)
Lars Skjaerven, Barry J. Grant, Arturo Muga, Knut Teigen, James Andrew McCammon, Nathalie Reuter, Aurora Martinez
Conformational Sampling and Nucleotide-Dependent Transitions of the GroEL Subunit Probed by Unbiased Molecular Dynamics Simulations. PLoS Comput. Biol. 7 (3) (2011)
Cagatay Turkay, Július Parulek, Nathalie Reuter, Helwig Hauser
Interactive Visual Analysis of Temporal Cluster Structures. Comput. Graph. Forum 30 (3) (2011)
Ove Daae Lampe, Ivan Viola, Nathalie Reuter, Helwig Hauser
Two-Level Approach to Efficient Visualization of Protein Dynamics. IEEE Trans. Vis. Comput. Graph. 13 (6) (2007)
Lars Skjaerven, Inge Jonassen, Nathalie Reuter
TMM@: a web application for the analysis of transmembrane helix mobility. BMC Bioinform. 8 (2007)
Siv Midtun Hollup, Gisle Sælensminde, Nathalie Reuter
WEBnm@: a web application for normal mode analyses of proteins. BMC Bioinform. 6 (2005)
Elsa S. Henriques, Wely B. Floriano, Nathalie Reuter, André Melo, David Brown, José A. N. F. Gomes, Bernard Maigret, Marco A. C. Nascimento, Maria João Ramos
The search for a new model structure of beta-Factor XIIa. J. Comput. Aided Mol. Des. 15 (4) (2001)