Martin Middendorf

ORCID

Publication Activity (10 Years)

Years Active: 1992-2023
Publications (10 Years): 25

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

EvoCOP

CoRR

GECCO

University of Hanover, Hannover, Germany (PHD)

Education History

University of Hanover, Hannover, Germany

PHD

Publications

Lisa Fiedler, Matthias Bernt, Martin Middendorf, Peter F. Stadler
Detecting gene breakpoints in noisy genome sequences using position-annotated colored de-Bruijn graphs. BMC Bioinform. 24 (1) (2023)
Daniel Werner, Fatma Turna, Hoang Thanh Le, Martin Middendorf
XF-OPT/META: A Hyperparameter Optimization Framework Applied to the H -SPPBO Metaheuristic for the Dynamic TSP. SSCI (2023)
Tom Hartmann, Max Bannach, Martin Middendorf, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth
Complete edge-colored permutation graphs. Adv. Appl. Math. 139 (2022)
Philine Geser, Hoang Thanh Le, Tom Hartmann, Martin Middendorf
On permutation schedules for two-machine flow shops with buffer constraints and constant processing times on one machine. Eur. J. Oper. Res. 303 (2) (2022)
Qi Zhao, Bai Yan, Yuhui Shi, Martin Middendorf
Evolutionary Dynamic Multiobjective Optimization via Learning From Historical Search Process. IEEE Trans. Cybern. 52 (7) (2022)
Hoang Thanh Le, Martin Middendorf, Yuhui Shi
An Improvement Heuristic Based on Variable Neighborhood Search for Dynamic Orienteering Problems with Changing Node Values and Changing Budgets. SN Comput. Sci. 3 (4) (2022)
Tom Hartmann, Max Bannach, Martin Middendorf
Sorting Signed Permutations by Inverse Tandem Duplication Random Losses. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (6) (2021)
Edward Kupfer, Hoang Thanh Le, Johanna Zitt, Ying-Chi Lin, Martin Middendorf
A Hierarchical Simple Probabilistic Population-Based Algorithm Applied to the Dynamic TSP. SSCI (2021)
Hoang Thanh Le, Philine Geser, Martin Middendorf
Iterated Local Search and Other Algorithms for Buffered Two-Machine Permutation Flow Shops with Constant Processing Times on One Machine. Evol. Comput. 29 (3) (2021)
Hoang Thanh Le, Martin Middendorf, Yuhui Shi
An Improvement Heuristic Based on Variable Neighborhood Search for a Dynamic Orienteering Problem. EvoCOP (2021)
Yang Shen, Mingde Liu, Jian Yang, Yuhui Shi, Martin Middendorf
A Hybrid Swarm Intelligence Algorithm for Vehicle Routing Problem With Time Windows. IEEE Access 8 (2020)
Daniel Abitz, Tom Hartmann, Martin Middendorf
A weighted population update rule for PACO applied to the single machine total weighted tardiness problem. GECCO (2020)
Tom Hartmann, Max Bannach, Martin Middendorf, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth
Complete Edge-Colored Permutation Graphs. CoRR (2020)
Daniel Abitz, Tom Hartmann, Martin Middendorf
A Weighted Population Update Rule for PACO Applied to the Single Machine Total Weighted Tardiness Problem. CoRR (2020)
Tom Hartmann, Matthias Bernt, Martin Middendorf
An Exact Algorithm for Sorting by Weighted Preserving Genome Rearrangements. IEEE ACM Trans. Comput. Biol. Bioinform. 16 (1) (2019)
Hoang Thanh Le, Philine Geser, Martin Middendorf
An Iterated Local Search Algorithm for the Two-Machine Flow Shop Problem with Buffers and Constant Processing Times on One Machine. EvoCOP (2019)
Tom Hartmann, An-Chiang Chu, Martin Middendorf, Matthias Bernt
Combinatorics of Tandem Duplication Random Loss Mutations on Circular Genomes. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (1) (2018)
Tom Hartmann, Nicolas Wieseke, Roded Sharan, Martin Middendorf, Matthias Bernt
Genome Rearrangement with ILP. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (5) (2018)
Tom Hartmann, Matthias Bernt, Martin Middendorf
EqualTDRL: illustrating equivalent tandem duplication random loss rearrangements. BMC Bioinform. 19 (1) (2018)
Marc Hellmuth, Nicolas Wieseke, Marcus Lechner, Hans-Peter Lenhof, Martin Middendorf, Peter F. Stadler
Phylogenomics with Paralogs. CoRR (2017)
Ying-Chi Lin, Martin Clauß, Martin Middendorf
Simple Probabilistic Population-Based Optimization. IEEE Trans. Evol. Comput. 20 (2) (2016)
Yih-Chun Cheng, Tom Hartmann, Pei-Yun Tsai, Martin Middendorf
Population based ant colony optimization for reconstructing ECG signals. Evol. Intell. 9 (3) (2016)
Ruby L. V. Moritz, Enrico Reich, Matthias Bernt, Martin Middendorf
A Property Preserving Method for Extending a Single-Objective Problem Instance to Multiple Objectives with Specific Correlations. EvoCOP (2016)
Yih-Chun Cheng, Tom Hartmann, Pei-Yun Tsai, Martin Middendorf
Population Based Ant Colony Optimization for Reconstructing ECG Signals. EvoApplications (1) (2016)
Martin Clauß, Lydia Lotzmann, Martin Middendorf
A Population Based ACO Algorithm for the Combined Tours TSP Problem. EAI Endorsed Trans. Self Adapt. Syst. 2 (7) (2016)
Ruby L. V. Moritz, Enrico Reich, Maik Schwarz, Matthias Bernt, Martin Middendorf
Refined ranking relations for selection of solutions in multi objective metaheuristics. Eur. J. Oper. Res. 243 (2) (2015)
Daniel Merkle, Martin Middendorf, Alexander Scheidler
Task allocation in organic computing systems: networks with reconfigurable helper units. Int. J. Auton. Adapt. Commun. Syst. 8 (1) (2015)
Ruby L. V. Moritz, Martin Middendorf
Evolutionary Inheritance Mechanisms for Multi-criteriaDecision Making in Multi-agent Systems. GECCO (2015)
Sebastian Volke, Dirk Zeckzer, Gerik Scheuermann, Martin Middendorf
A Visual Method for Analysis and Comparison of Search Landscapes. GECCO (2015)
Ruby L. V. Moritz, Martin Middendorf
Decentralized and dynamic group formation of reconfigurable agents. Memetic Comput. 7 (2) (2015)
Martin Clauß, Lydia Lotzmann, Martin Middendorf
A Population Based ACO Algorithm for the Combined Tours TSP Problem. BICT (2015)
Nicolas Wieseke, Tom Hartmann, Matthias Bernt, Martin Middendorf
Cophylogenetic Reconciliation with ILP. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (6) (2015)
Simon Bin, Sebastian Volke, Gerik Scheuermann, Martin Middendorf
Comparing the Optimization Behaviour of Heuristics with Topology Based Visualization. TPNC (2014)
Ruby L. V. Moritz, Enrico Reich, Matthias Bernt, Martin Middendorf
The Influence of Correlated Objectives on Different Types of P-ACO Algorithms. EvoCOP (2014)
Manja Marz, Niko Beerenwinkel, Christian Drosten, Markus Fricke, Dmitrij Frishman, Ivo L. Hofacker, Dieter Hoffmann, Martin Middendorf, Thomas Rattei, Peter F. Stadler, Armin Töpfer
Challenges in RNA virus bioinformatics. Bioinform. 30 (13) (2014)
Nicolas Wieseke, Matthias Bernt, Martin Middendorf
Unifying Parsimonious Tree Reconciliation. WABI (2013)
Ruby L. V. Moritz, Martin Middendorf
Self-adaptable Group Formation of Reconfigurable Agents in Dynamic Environments. NICSO (2013)
Martin Clauß, Matthias Bernt, Martin Middendorf
A common interval guided ACO algorithm for permutation problems. SIS (2013)
Ruby L. V. Moritz, Enrico Reich, Maik Schwarz, Matthias Bernt, Martin Middendorf
Refined ranking relations for multi objective optimization andapplication to P-ACO. GECCO (2013)
Sebastian Volke, Martin Middendorf, Mario Hlawitschka, Jens Kasten, Dirk Zeckzer, Gerik Scheuermann
dPSO-Vis: Topology-based Visualization of Discrete Particle Swarm Optimization. Comput. Graph. Forum 32 (3) (2013)
Ying-Chi Lin, Martin Middendorf
Simple probabilistic population based optimization for combinatorial optimization. SIS (2013)
Matthias Bernt, Nicolas Wieseke, Martin Middendorf
On Weighting Schemes for Gene Order Analysis. GCB (2013)
Ruby L. V. Moritz, Martin Middendorf
Self-organized cooperation between agents that have to solve resource collection tasks. SIS (2013)
Alexander Scheidler, Daniel Merkle, Martin Middendorf
Swarm controlled emergence for ant clustering. Int. J. Intell. Comput. Cybern. 6 (1) (2013)
Ruby L. V. Moritz, Matthias Bernt, Martin Middendorf
Annotation guided local similarity search in multiple sequences and its application to mitochondrial genomes. BIBE (2012)
Matthias Bernt, Kun-Mao Chao, Jyun-Wei Kao, Martin Middendorf, Eric Tannier
Preserving Inversion Phylogeny Reconstruction. WABI (2012)
Konrad Diwold, Andrej Aderhold, Alexander Scheidler, Martin Middendorf
Performance evaluation of artificial bee colony optimization and new selection schemes. Memetic Comput. 3 (3) (2011)
Michael Geis, Martin Middendorf
Particle swarm optimization for finding RNA secondary structures. Int. J. Intell. Comput. Cybern. 4 (2) (2011)
Ruby L. V. Moritz, Kai Ramsch, Martin Middendorf
Trophallaxis-inspired self-organized task exchange in heterogeneous swarms. SWIS (2011)
Matthias Bernt, Kuan-Yu Chen, Ming-Chiang Chen, An-Chiang Chu, Daniel Merkle, Hung-Lung Wang, Kun-Mao Chao, Martin Middendorf
Finding all sorting tandem duplication random loss operations. J. Discrete Algorithms 9 (1) (2011)
Matthias Bernt, Martin Middendorf
A method for computing an inventory of metazoan mitochondrial gene order rearrangements. BMC Bioinform. 12 (S-9) (2011)
Wei Cheng, Bernd Scheuermann, Martin Middendorf
Quick-ACO: Accelerating Ant Decisions and Pheromone Updates in ACO. EvoCOP (2011)
Konrad Diwold, Daniel Himmelbach, René Meier, Carsten Baldauf, Martin Middendorf
Bonding as a swarm: applying bee nest-site selection behaviour to protein docking. GECCO (2011)
Alexander Scheidler, Martin Middendorf
Learning classifier systems to evolve classification rules for systems of memory constrained components. Evol. Intell. 4 (3) (2011)
Konrad Diwold, Timothy M. Schaerf, Mary R. Myerscough, Martin Middendorf, Madeleine Beekman
. Swarm Intell. 5 (2) (2011)
Daniel Merkle, Martin Middendorf, Nicolas Wieseke
A parameter-adaptive dynamic programming approach for inferring cophylogenies. BMC Bioinform. 11 (S-1) (2010)
Konrad Diwold, Madeleine Beekman, Martin Middendorf
Bee Nest Site Selection as an Optimization Process. ALIFE (2010)
Andrej Aderhold, Konrad Diwold, Alexander Scheidler, Martin Middendorf
Artificial Bee Colony Optimization: A New Selection Scheme and Its Performance. NICSO (2010)
Sebastian Lange, Martin Middendorf
Multi-level reconfigurable architectures in the switch model. J. Syst. Archit. 56 (2-3) (2010)
Konrad Diwold, Thomas Ruhnke, Martin Middendorf
Sensor Placement in Water Networks Using a Population-Based Ant Colony Optimization Algorithm. ICCCI (3) (2010)
Jörg Fliege, Nicola Beume, Jürgen Branke, Heinrich Braun, Nirupam Chakraborti, Kalyanmoy Deb, Sabine Helwig, Joshua D. Knowles, Martin Middendorf, Sanaz Mostaghim, Silvia Poles, Daniel E. Salazar Aponte, Shukla Pradymn, El-Ghazali Talbi
09041 Working Group on EMO for Robust Multiobjective Optimization (1st Round). Hybrid and Robust Approaches to Multiobjective Optimization (2009)
Andries P. Engelbrecht, Xiaodong Li, Martin Middendorf, Luca Maria Gambardella
Editorial Special Issue: Swarm Intelligence. IEEE Trans. Evol. Comput. 13 (4) (2009)
Konrad Diwold, Daniel Merkle, Martin Middendorf
Adapting to Dynamic Environments: Polyethism in Response Threshold Models for Social Insects. Adv. Complex Syst. 12 (3) (2009)
Alexander Scheidler, Martin Middendorf
Evolved cooperation and emergent communication structures in learning classifier based organic computing systems. GECCO (Companion) (2009)
Marc Hellmuth, Daniel Merkle, Martin Middendorf
Extended shapes for the combinatorial design of RNA sequences. Int. J. Comput. Biol. Drug Des. 2 (4) (2009)
Matthias Bernt, Ming-Chiang Chen, Daniel Merkle, Hung-Lung Wang, Kun-Mao Chao, Martin Middendorf
Finding All Sorting Tandem Duplication Random Loss Operations. CPM (2009)
Marc Hellmuth, Daniel Merkle, Martin Middendorf
On the Design of RNA Sequences for Realizing Extended Shapes. IJCBS (2009)
Hugo Hernández, Christian Blum, Martin Middendorf, Kai Ramsch, Alexander Scheidler
Self-synchronized duty-cycling for mobile sensor networks with energy harvesting capabilities: A swarm intelligence study. SIS (2009)
Tri Basuki Kurniawan, Noor Khafifah Khalid, Zuwairie Ibrahim, Marzuki Khalid, Martin Middendorf
Evaluation of Ordering Methods for DNA Sequence Design Based on Ant Colony System. Asia International Conference on Modelling and Simulation (2008)
Sebastian Lange, Martin Middendorf
Hyperreconfigurable architectures. FPL (2008)
Alexander Scheidler, Daniel Merkle, Martin Middendorf
Stability and performance of ant queue inspired task partitioning methods. Theory Biosci. 127 (2) (2008)
Alexander Scheidler, Christian Blum, Daniel Merkle, Martin Middendorf
Emergent Sorting in Networks of Router Agents. ANTS Conference (2008)
Matthias Bernt, Daniel Merkle, Martin Middendorf
Solving the Preserving Reversal Median Problem. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (3) (2008)
Daniel Merkle, Martin Middendorf, Alexander Scheidler
Self-Organized Task Allocation for Service Tasks in Computing Systems with Reconfigurable Components. J. Math. Model. Algorithms 7 (2) (2008)
Sebastian Lange, Martin Middendorf
Design Aspects of Multi-level Reconfigurable Architectures. J. Signal Process. Syst. 51 (1) (2008)
Stefan Janson, Daniel Merkle, Martin Middendorf
A decentralization approach for swarm intelligence algorithms in networks applied to multi swarm PSO. Int. J. Intell. Comput. Cybern. 1 (1) (2008)
Arne Brutschy, Alexander Scheidler, Daniel Merkle, Martin Middendorf
Learning from House-Hunting Ants: Collective Decision-Making in Organic Computing Systems. ANTS Conference (2008)
Matthias Bernt, Daniel Merkle, Martin Middendorf
An Algorithm for Inferring Mitogenome Rearrangements in a Phylogenetic Tree. RECOMB-CG (2008)
Michael Geis, Martin Middendorf
Creating melodies and baroque harmonies with ant colony optimization. Int. J. Intell. Comput. Cybern. 1 (2) (2008)
Jürgen Jost, Dirk Helbing, András Lörincz, Martin Middendorf
Editorial. Theory Biosci. 127 (2) (2008)
Alexander Scheidler, Daniel Merkle, Martin Middendorf
Congestion Control in Ant Like Moving Agent Systems. BICC (2008)
Daniel Merkle, Martin Middendorf
Swarm intelligence and signal processing [DSP Exploratory]. IEEE Signal Process. Mag. 25 (6) (2008)
Stefan Janson, Daniel Merkle, Martin Middendorf
Molecular docking with multi-objective Particle Swarm Optimization. Appl. Soft Comput. 8 (1) (2008)
Bernd Scheuermann, Stefan Janson, Martin Middendorf
Hardware-oriented ant colony optimization. J. Syst. Archit. 53 (7) (2007)
Michael Geis, Martin Middendorf
An ant colony optimizer for melody creation with baroque harmony. IEEE Congress on Evolutionary Computation (2007)
Matthias Bernt, Daniel Merkle, Martin Middendorf
A Fast and Exact Algorithm for the Perfect Reversal Median Problem. ISBRA (2007)
Matthias Bernt, Daniel Merkle, Martin Middendorf
Using median sets for inferring phylogenetic trees. Bioinform. 23 (2) (2007)
Matthias Bernt, Daniel Merkle, Kai Ramsch, Guido Fritzsch, Marleen Perseke, Detlef Bernhard, Martin Schlegel, Peter F. Stadler, Martin Middendorf
CREx: inferring genomic rearrangements based on common intervals. Bioinform. 23 (21) (2007)
Michael Geis, Martin Middendorf
A Particle Swarm Optimizer for Finding Minimum Free Energy RNA Secondary Structures. SIS (2007)
Daniel Merkle, Martin Middendorf, Alexander Scheidler
Swarm Controlled Emergence - Designing an Anti-Clustering Ant System. SIS (2007)
Stefan Janson, Martin Middendorf
On Trajectories of Particles in PSO. SIS (2007)
Daniel Merkle, Martin Middendorf
Marco Dorigo and Thomas Stützle, Ant Colony Optimization, MIT Press (2004) ISBN 0-262-04219-3. Eur. J. Oper. Res. 168 (1) (2006)
Sebastian Lange, Martin Middendorf
Cache Architectures for Reconfigurable Hardware. ERSA (2006)
Daniel Merkle, Martin Middendorf, Alexander Scheidler
Modeling Ant Brood ending Patterns with Cellular Automata. J. Cell. Autom. 1 (2) (2006)
Stefan Janson, Enrique Alba, Bernabé Dorronsoro, Martin Middendorf
Hierarchical Cellular Genetic Algorithm. EvoCOP (2006)
Matthias Bernt, Daniel Merkle, Martin Middendorf
Genome Rearrangement Based on Reversals that Preserve Conserved Intervals. IEEE ACM Trans. Comput. Biol. Bioinform. 3 (3) (2006)
Matthias Bernt, Daniel Merkle, Martin Middendorf
The Reversal Median Problem, Common Intervals, and Mitochondrial Gene Orders. CompLife (2006)
Sebastian Lange, Martin Middendorf
Granularity aspects for the design of multi-level reconfigurable architectures. FPT (2006)
Sebastian Lange, Martin Middendorf
Multi-level reconfigurable architectures in the switch model. IPDPS (2006)
Stefan Janson, Martin Middendorf
A hierarchical particle swarm optimizer for noisy and dynamic environments. Genet. Program. Evolvable Mach. 7 (4) (2006)

Martin Middendorf.css-eqlu8i{font-size:small;padding-left:4px;}

Publication Activity (10 Years)

Top Topics

Top Venues

Martin Middendorf