Henry C. M. Leung

Publication Activity (10 Years)

Years Active: 2004-2020
Publications (10 Years): 4

Top Topics

Mixed Membership

Bayesian Network Structure

Relaxation Algorithm

Top Venues

J. Comput. Biol.

Publications

Wui Wang Lui, Amy W. S. Leung, Henry C. M. Leung, Yan Xin, Jade L. L. Teng, Patrick C. Y. Woo, Tak Wah Lam, Ruibang Luo
MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read Metagenomics. BIBM (2020)
Ye Wu, Ruibang Luo, Henry C. M. Leung, Hing-Fung Ting, Tak Wah Lam
RENET: A Deep Learning Approach for Extracting Gene-Disease Associations from Literature. RECOMB (2019)
Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
Mixed Membership Sparse Gaussian Conditional Random Fields. ADMA (2017)
Dinghua Li, Yukun Huang, Henry C. M. Leung, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam
MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs. BMC Bioinform. 18 (S-12) (2017)
Xiao Zhu, Henry C. M. Leung, Rongjie Wang, Francis Y. L. Chin, Siu-Ming Yiu, Guangri Quan, Yajie Li, Rui Zhang, Qinghua Jiang, Bo Liu, Yucui Dong, Guohui Zhou, Yadong Wang
misFinder: identify mis-assemblies in an unbiased manner using reference and paired-end reads. BMC Bioinform. 16 (2015)
Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
IDBA-MTP: A Hybrid Metatranscriptomic Assembler Based on Protein Information. J. Comput. Biol. 22 (5) (2015)
Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
IDBA-MTP: A Hybrid MetaTranscriptomic Assembler Based on Protein Information. RECOMB (2014)
Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Yunpeng Cai, Francis Y. L. Chin
Learning Sparse Gaussian Bayesian Network Structure by Variable Grouping. ICDM (2014)
Jianyu Shi, Siu-Ming Yiu, Yiming Li, Henry C. M. Leung, Francis Y. L. Chin
. BIBM (2014)
Ming-Yang Kao, Henry C. M. Leung, He Sun, Yong Zhang
Deterministic polynomial-time algorithms for designing short DNA words. Theor. Comput. Sci. 494 (2013)
Henry C. M. Leung, Siu-Ming Yiu, John Parkinson, Francis Y. L. Chin
Assembler for Metatranscriptomic Data Generated from Next-Generation Sequencing Technology. J. Comput. Biol. 20 (7) (2013)
Hoa Vu, Francis Y. L. Chin, Wing-Kai Hon, Henry C. M. Leung, Kunihiko Sadakane, Ken Wing-Kin Sung, Siu-Ming Yiu
-Reticulated Phylogenetic Network from a Set of Gene Trees. ISBRA (2013)
Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu
Non-adaptive complex group testing with multiple positive sets. Theor. Comput. Sci. 505 (2013)
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Ming-Ju Lv, Xin-Guang Zhu, Francis Y. L. Chin
IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels. Bioinform. 29 (13) (2013)
Jie Yang, Henry C. M. Leung, Siu-Ming Yiu, Yunpeng Cai, Francis Y. L. Chin
Intra- and inter-sparse multiple output regression with application on environmental microbial community study. BIBM (2013)
Xiao Zhu, Henry C. M. Leung, Francis Y. L. Chin, Siu-Ming Yiu, Guangri Quan, Bo Liu, Yadong Wang
PERGA: A Paired-End Read Guided De Novo Assembler for Extending Contigs Using SVM Approach. BCB (2013)
Yi Wang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
MetaCluster 4.0: A Novel Binning Algorithm for NGS Reads and Huge Number of Species. J. Comput. Biol. 19 (2) (2012)
Yi Wang, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample. Bioinform. 28 (18) (2012)
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinform. 28 (11) (2012)
Ming-Yang Kao, Henry C. M. Leung, He Sun, Yong Zhang
Deterministic Polynomial-Time Algorithms for Designing Short DNA Words CoRR (2012)
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
T-IDBA: A de novo Iterative de Bruijn Graph Assembler for Transcriptome - (Extended Abstract). RECOMB (2011)
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
assembler for metagenomic data. Bioinform. 27 (13) (2011)
Henry C. M. Leung, Siu-Ming Yiu, Bin Yang, Yu Peng, Yi Wang, Zhihua Liu, Jing-Chi Chen, Junjie Qin, Ruiqiang Li, Francis Y. L. Chin
A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio. Bioinform. 27 (11) (2011)
Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu
Non-adaptive Complex Group Testing with Multiple Positive Sets. TAMC (2011)
Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu
Adaptive Phenotype Testing for AND/OR Items. ISAAC (2011)
Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Francis Y. L. Chin
IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler. RECOMB (2010)
Shuen-Yi Leung, Henry C. M. Leung, Carlos Lu Xiang, Siu-Ming Yiu, Francis Y. L. Chin
Predicting metabolic pathways from metabolic networks with limited biological knowledge. BIBM Workshops (2010)
Ming-Yang Kao, Henry C. M. Leung, He Sun, Yong Zhang
Deterministic Polynomial-Time Algorithms for Designing Short DNA Words. TAMC (2010)
Bin Yang, Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Junjie Qin, Ruiqiang Li, Francis Y. L. Chin
MetaCluster: unsupervised binning of environmental genomic fragments and taxonomic annotation. BCB (2010)
Henry C. M. Leung, Qian Xiang, Siu-Ming Yiu, Francis Y. L. Chin
Predicting Protein Complexes from PPI Data: A Core-Attachment Approach. J. Comput. Biol. 16 (2) (2009)
Francis Y. L. Chin, Henry C. M. Leung, Wei-Lin Li, Siu-Ming Yiu
Finding optimal threshold for correction error reads in DNA assembling. BMC Bioinform. 10 (S-1) (2009)
Bin Yang, Yu Peng, Henry C. M. Leung, Siu-Ming Yiu, Jing-Chi Chen, Francis Y. L. Chin
Unsupervised binning of environmental genomic fragments based on an error robust selection of l-mers. DTMBIO (2009)
Francis Y. L. Chin, Henry C. M. Leung
DNA Motif Representation with Nucleotide Dependency. IEEE ACM Trans. Comput. Biol. Bioinform. 5 (1) (2008)
Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Siu, Siu-Ming Yiu
Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency. APBC (2008)
Henry C. M. Leung, Francis Y. L. Chin, Bethany Man-Yee Chan
Discovering Motifs With Transcription Factor Domain Knowledge. Pacific Symposium on Biocomputing (2007)
Francis Y. L. Chin, Henry C. M. Leung, Wing-Kin Sung, Siu-Ming Yiu
The Point Placement Problem on a Line - Improved Bounds for Pairwise Distance Queries. WABI (2007)
Henry C. M. Leung, Francis Y. L. Chin
An efficient motif discovery algorithm with unknown motif length and number of binding sites. Int. J. Data Min. Bioinform. 1 (2) (2006)
Henry C. M. Leung, Francis Y. L. Chin
Finding motifs from all sequences with and without binding sites. Bioinform. 22 (18) (2006)
Henry C. M. Leung, Francis Y. L. Chin
Algorithms for Challenging Motif Problems. J. Bioinform. Comput. Biol. 4 (1) (2006)
Henry C. M. Leung, Francis Y. L. Chin
Discovering DNA Motifs with Nucleotide Dependency. BIBE (2006)
Francis Y. L. Chin, Henry C. M. Leung
An Efficient Algorithm for String Motif Discovery. APBC (2006)
Giovanni de Marco, Monique de Bonis, P. Vrignaud, Henry C. M. Leung, I. Peretti
Changes in effective connectivity during incidental and intentional perception of fearful faces. NeuroImage 30 (3) (2006)
Henry C. M. Leung, Francis Y. L. Chin
An Efficient Algorithm for the Extended (l, d)-Motif Problem with Unknown Number of Binding Sites. BIBE (2005)
Henry C. M. Leung, Francis Y. L. Chin, Siu-Ming Yiu, Ronald Rosenfeld, Wai Wan Tsang
Finding Motifs with Insufficient Number of Strong Binding Sites. J. Comput. Biol. 12 (6) (2005)
Francis Y. L. Chin, Henry C. M. Leung
Voting algorithms for discovering long motifs. APBC (2005)
Henry C. M. Leung, Francis Y. L. Chin
Finding exact optimal motifs in matrix representation by partitioning. ECCB/JBI (2005)
Henry C. M. Leung, Francis Y. L. Chin
)-Motif Problem with Negative Set. WABI (2005)
Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu, Tak Wah Lam, Roni Rosenfeld, Wai Wan Tsang, David K. Smith, Y. Jiang
Finding motifs for insufficient number of sequences with strong binding to transcription facto. RECOMB (2004)