A robust and accurate binning algorithm for metagenomic sequences with arbitrary species abundance ratio.
Henry C. M. LeungSiu-Ming YiuBin YangYu PengYi WangZhihua LiuJing-Chi ChenJunjie QinRuiqiang LiFrancis Y. L. ChinPublished in: Bioinform. (2011)
Keyphrases
- computationally efficient
- detection algorithm
- computational complexity
- high accuracy
- parameter tuning
- preprocessing
- optimization algorithm
- learning algorithm
- cost function
- search space
- objective function
- times faster
- simulated annealing
- particle swarm optimization
- expectation maximization
- experimental evaluation
- recognition algorithm
- optimal solution
- arbitrary length
- probabilistic model
- dynamic programming
- k means
- tree structure
- matching algorithm
- evolutionary algorithm
- completely automatic