Wing-Kin Sung

ORCID

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 45

Top Venues

Publications

Jesper Jansson, Wing-Kin Sung, Seyed Ali Tabatabaee, Yutong Yang
A Faster Algorithm for Constructing the Frequency Difference Consensus Tree. STACS (2024)
Yan Zheng, Xuequn Shang, Wing-Kin Sung
SVsearcher: A more accurate structural variation detection method in long read data. Comput. Biol. Medicine 158 (2023)
Mustafa Umit Oner, Jared Marc Song Kye-Jet, Hwee Kuan Lee, Wing-Kin Sung
Distribution based MIL pooling filters: Experiments on a lymph node metastases dataset. Medical Image Anal. 87 (2023)
Roberto Grossi, Costas S. Iliopoulos, Jesper Jansson, Zara Lim, Wing-Kin Sung, Wiktor Zuba
Finding the Cyclic Covers of a String. WALCOM (2023)
Christopher Hampson, Daniel J. Harvey, Costas S. Iliopoulos, Jesper Jansson, Zara Lim, Wing-Kin Sung
MUL-Tree Pruning for Consistency and Compatibility. CPM (2023)
Qiangwei Zhou, Pengpeng Guan, Zhixian Zhu, Sheng Cheng, Cong Zhou, Huanhuan Wang, Qian Xu, Wing-Kin Sung, Guoliang Li
ASMdb: a comprehensive database for allele-specific DNA methylation in diverse organisms. Nucleic Acids Res. 50 (D1) (2022)
Mustafa Umit Oner, Wing-Kin Sung, Hwee Kuan Lee
Oner, Sung, and Lee: Researchers in digital pathology for the future of modern medicine. Patterns 3 (2) (2022)
Mustafa Umit Oner, Jianbin Chen, Egor Revkov, Anne James, Seow Ye Heng, Arife Neslihan Kaya, Jacob Josiah Santiago Alvarez, Angela Takano, Xin Min Cheng, Tony Kiat Hon Lim, Daniel Shao-Weng Tan, Weiwei Zhai, Anders Jacobsen Skanderup, Wing-Kin Sung, Hwee Kuan Lee
Obtaining spatially resolved tumor purity maps using deep multiple instance learning in a pan-cancer study. Patterns 3 (2) (2022)
Mustafa Umit Oner, Mei Ying Ng, Danilo Medina Giron, Cecilia Ee Chen Xi, Louis Ang Yuan Xiang, Malay Singh, Weimiao Yu, Wing-Kin Sung, Chin Fong Wong, Hwee Kuan Lee
An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases. Patterns 3 (12) (2022)
M. Sohel Rahman, Kunihiko Sadakane, Wing-Kin Sung
Guest editors' foreword. J. Graph Algorithms Appl. 25 (2) (2021)
Ramesh Rajaby, Wing-Kin Sung
SurVIndel: improving CNV calling from high-throughput sequencing data through statistical testing. Bioinform. 37 (11) (2021)
Anik Sarker, Wing-Kin Sung, M. Sohel Rahman
-gathering problem on the line. Theor. Comput. Sci. 866 (2021)
Jesper Jansson, Konstantinos Mampentzidis, Ramesh Rajaby, Wing-Kin Sung
Computing the Rooted Triplet Distance Between Phylogenetic Networks. Algorithmica 83 (6) (2021)
Xi Zeng, Linghao Zhao, Chenhang Shen, Yi Zhou, Guoliang Li, Wing-Kin Sung
HIVID2: an accurate tool to detect virus integrations in the host genome. Bioinform. 37 (13) (2021)
Mai Alzamel, Panagiotis Charalampopoulos, Costas S. Iliopoulos, Solon P. Pissis, Jakub Radoszewski, Wing-Kin Sung
Faster algorithms for 1-mappability of a sequence. Theor. Comput. Sci. 812 (2020)
Mustafa Umit Oner, Hwee Kuan Lee, Wing-Kin Sung
Weakly Supervised Clustering by Exploiting Unique Class Count. ICLR (2020)
Hayam Alamro, Mai Alzamel, Costas S. Iliopoulos, Solon P. Pissis, Wing-Kin Sung, Steven Watts
Efficient Identification of k-Closed Strings. Int. J. Found. Comput. Sci. 31 (5) (2020)
Mustafa Umit Oner, Jared Marc Song Kye-Jet, Hwee Kuan Lee, Wing-Kin Sung
Studying The Effect of MIL Pooling Filters on MIL Tasks. CoRR (2020)
Qiangwei Zhou, Ze Wang, Jing Li, Wing-Kin Sung, Guoliang Li
MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification. BMC Bioinform. 21 (1) (2020)
Qiangwei Zhou, Jing-Quan Lim, Wing-Kin Sung, Guoliang Li
An integrated package for bisulfite DNA methylation data analysis with Indel-sensitive mapping. BMC Bioinform. 20 (1) (2019)
Jesper Jansson, Ramesh Rajaby, Wing-Kin Sung
An Efficient Algorithm for the Rooted Triplet Distance Between Galled Trees. J. Comput. Biol. 26 (9) (2019)
Mai Alzamel, Costas S. Iliopoulos, W. F. Smyth, Wing-Kin Sung
Off-line and on-line algorithms for closed string factorization. Theor. Comput. Sci. 792 (2019)
M. Sohel Rahman, Wing-Kin Sung, Ryuhei Uehara
Guest Editors' Foreword. J. Graph Algorithms Appl. 23 (5) (2019)
Mustafa Umit Oner, Hwee Kuan Lee, Wing-Kin Sung
A Weakly Supervised Learning Based Clustering Framework. CoRR (2019)
Anik Sarker, Wing-Kin Sung, M. Sohel Rahman
A Linear Time Algorithm for the r-Gathering Problem on the Line (Extended Abstract). WALCOM (2019)
Wing-Kin Sung
Greedy Consensus Tree and Maximum Greedy Consensus Tree Problems. WALCOM (2019)
Jesper Jansson, Konstantinos Mampentzidis, Ramesh Rajaby, Wing-Kin Sung
Computing the Rooted Triplet Distance Between Phylogenetic Networks. IWOCA (2019)
Jesper Jansson, Andrzej Lingas, Ramesh Rajaby, Wing-Kin Sung
Determining the Consistency of Resolved Triplets and Fan Triplets. J. Comput. Biol. 25 (7) (2018)
Pawel Gawrychowski, Gad M. Landau, Wing-Kin Sung, Oren Weimann
A Faster Construction of Greedy Consensus Trees. ICALP (2018)
Jesper Jansson, Ramesh Rajaby, Chuanqi Shen, Wing-Kin Sung
Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (1) (2018)
Jesper Jansson, Andrzej Lingas, Ramesh Rajaby, Wing-Kin Sung
Determining the Consistency of Resolved Triplets and Fan Triplets. RECOMB (2017)
Jesper Jansson, Ramesh Rajaby, Wing-Kin Sung
An Efficient Algorithm for the Rooted Triplet Distance Between Galled Trees. AlCoB (2017)
Ramesh Rajaby, Wing-Kin Sung
Computing Asymmetric Median Tree of Two Trees via Better Bipartite Matching Algorithm. IWOCA (2017)
Mai Alzamel, Panagiotis Charalampopoulos, Costas S. Iliopoulos, Solon P. Pissis, Jakub Radoszewski, Wing-Kin Sung
Faster algorithms for 1-mappability of a sequence. CoRR (2017)
Pawel Gawrychowski, Gad M. Landau, Wing-Kin Sung, Oren Weimann
A Faster Construction of Phylogenetic Consensus Trees. CoRR (2017)
Jesper Jansson, Zhaoxian Li, Wing-Kin Sung
On finding the Adams consensus tree. Inf. Comput. 256 (2017)
Mai Alzamel, Panagiotis Charalampopoulos, Costas S. Iliopoulos, Solon P. Pissis, Jakub Radoszewski, Wing-Kin Sung
Faster Algorithms for 1-Mappability of a Sequence. COCOA (2) (2017)
Hayam Alamro, Mai Alzamel, Costas S. Iliopoulos, Solon P. Pissis, Steven Watts, Wing-Kin Sung
Efficient Identification of k-Closed Strings. EANN (2017)
Chandana Tennakoon, Wing-Kin Sung
BATVI: Fast, sensitive and accurate detection of virus integrations. BMC Bioinform. 18 (S-3) (2017)
Jesper Jansson, Wing-Kin Sung, Hoa Vu, Siu-Ming Yiu
Faster Algorithms for Computing the R* Consensus Tree. Algorithmica 76 (4) (2016)
Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
Improved Algorithms for Constructing Consensus Trees. J. ACM 63 (3) (2016)
Jesper Jansson, Wing-Kin Sung
Minimal Phylogenetic Supertrees and Local Consensus Trees. MFCS (2016)
Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung
Linked Dynamic Tries with Applications to LZ-Compression in Sublinear Time and Space. Algorithmica 71 (4) (2015)
Jesper Jansson, Zhaoxian Li, Wing-Kin Sung
On Finding the Adams Consensus Tree. STACS (2015)
Wing-Kin Sung, Kunihiko Sadakane, Tetsuo Shibuya, Abha Belorkar, Iana Pyrogova
An O(m, log m)-Time Algorithm for Detecting Superbubbles. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (4) (2015)
Huy Hoang Do, Wing-Kin Sung
CWig: compressed representation of Wiggle/BedGraph format. Bioinform. 30 (18) (2014)
Huy Hoang Do, Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung
Fast relative Lempel-Ziv self-index for similar sequences. Theor. Comput. Sci. 532 (2014)
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
Guest Editorial for the International Conference on Genome Informatics (GIW 2013). IEEE ACM Trans. Comput. Biol. Bioinform. 11 (1) (2014)
Jesper Jansson, Wing-Kin Sung, Hoa Vu, Siu-Ming Yiu
Faster Algorithms for Computing the R* Consensus Tree. ISAAC (2014)
ZhiZhuo Zhang, Guoliang Li, Kim-Chuan Toh, Wing-Kin Sung
3D Chromosome Modeling with Semi-Definite Programming and Hi-C Data. J. Comput. Biol. 20 (11) (2013)
Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
An Optimal Algorithm for Building the Majority Rule Consensus Tree. RECOMB (2013)
ZhiZhuo Zhang, Cheng Wei Chang, Hugo Willy, Edwin Cheung, Wing-Kin Sung
Simultaneously Learning DNA Motif Along with Its Position and Sequence Rank Preferences Through Expectation Maximization Algorithm. J. Comput. Biol. 20 (3) (2013)
Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree. WABI (2013)
Kunihiko Sadakane, Wing-Kin Sung
Compact Data structures for Big Data (NII Shonan Meeting 2013-10). NII Shonan Meet. Rep. 2013 (2013)
Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
Improved Algorithms for Constructing Consensus Trees. SODA (2013)
Jesper Jansson, Chuanqi Shen, Wing-Kin Sung
Algorithms for the Majority Rule (+) Consensus Tree and the Frequency Difference Consensus Tree. CoRR (2013)
ZhiZhuo Zhang, Guoliang Li, Kim-Chuan Toh, Wing-Kin Sung
Inference of Spatial Organizations of Chromosomes Using Semi-definite Embedding Approach and Hi-C Data. RECOMB (2013)
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions. BMC Syst. Biol. 7 (S-6) (2013)
Jesper Jansson, Wing-Kin Sung
Constructing the R* Consensus Tree of Two Trees in Subcubic Time. Algorithmica 66 (2) (2013)
Huy Hoang Do, Wing-Kin Sung
Compressed Directed Acyclic Word Graph with Application in Local Alignment. Algorithmica 67 (2) (2013)
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
The 24th International Conference on genome Informatics, Giw2013, in Singapore. J. Bioinform. Comput. Biol. 11 (6) (2013)
Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung
Ultra-succinct representation of ordered trees with applications. J. Comput. Syst. Sci. 78 (2) (2012)
Huy Hoang Do, Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung
Fast Relative Lempel-Ziv Self-index for Similar Sequences. FAW-AAIM (2012)
Jurek Czyzowicz, Stefan Dobrev, Leszek Gasieniec, David Ilcinkas, Jesper Jansson, Ralf Klasing, Ioannis Lignos, Russell Martin, Kunihiko Sadakane, Wing-Kin Sung
More efficient periodic traversal in anonymous undirected graphs. Theor. Comput. Sci. 444 (2012)
Wing-Kin Sung
Bioinformatics Applications in Genomics. Computer 45 (6) (2012)
Yun Cui, Jesper Jansson, Wing-Kin Sung
Polynomial-Time Algorithms for Building a Consensus MUL-Tree. J. Comput. Biol. 19 (9) (2012)
Chandana Tennakoon, Rikky W. Purbojati, Wing-Kin Sung
-mismatch mapping. Bioinform. 28 (16) (2012)
Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung
CRAM: Compressed Random Access Memory. ICALP (1) (2012)
ZhiZhuo Zhang, Cheng Wei Chang, Hugo Willy, Edwin Cheung, Wing-Kin Sung
Simultaneously Learning DNA Motif along with Its Position and Sequence Rank Preferences through EM Algorithm. RECOMB (2012)
Huy Hoang Do, Wing-Kin Sung
Compressed Directed Acyclic Word Graph with Application in Local Alignment. COCOON (2011)
Thomas K. F. Wong, Tak Wah Lam, Wing-Kin Sung, Brenda W. Y. Cheung, Siu-Ming Yiu
Structural Alignment of RNA with Complex Pseudoknot Structure. J. Comput. Biol. 18 (1) (2011)
Viet Tung Hoang, Wing-Kin Sung
Improved Algorithms for Maximum Agreement and Compatible Supertrees. Algorithmica 59 (2) (2011)
ZhiZhuo Zhang, Cheng Wei Chang, Wan Ling Goh, Wing-Kin Sung, Edwin Cheung
CENTDIST: discovery of co-associated factors by motif distribution. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Sylvain Guillemot, Jesper Jansson, Wing-Kin Sung
Computing a Smallest Multilabeled Phylogenetic Tree from Rooted Triplets. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (4) (2011)
Song Gao, Niranjan Nagarajan, Wing-Kin Sung
Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences. RECOMB (2011)
Song Gao, Wing-Kin Sung, Niranjan Nagarajan
Opera: Reconstructing Optimal Genomic Scaffolds with High-Throughput Paired-End Sequences. J. Comput. Biol. 18 (11) (2011)
Pramila Nuwantha Ariyaratne, Wing-Kin Sung
assembler using short paired-end reads. Bioinform. 27 (2) (2011)
Yun Cui, Jesper Jansson, Wing-Kin Sung
Algorithms for Building Consensus MUL-trees. ISAAC (2011)
Wing-Kai Hon, Kunihiko Sadakane, Wing-Kin Sung
Succinct data structures for Searchable Partial Sums with optimal worst-case performance. Theor. Comput. Sci. 412 (39) (2011)
Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong
A linear size index for approximate pattern matching. J. Discrete Algorithms 9 (4) (2011)
Shlomo Moran, Sagi Snir, Wing-Kin Sung
Partial convex recolorings of trees and galled networks: Tight upper and lower bounds. ACM Trans. Algorithms 7 (4) (2011)
Rakhi Malpani, Meiliu Lu, Du Zhang, Wing-Kin Sung
Mining transcriptional association rules from breast cancer profile data. IRI (2011)
Han Xu, Lusy Handoko, Xueliang Wei, Chaopeng Ye, Jianpeng Sheng, Chia-Lin Wei, Feng Lin, Wing-Kin Sung
A signal-noise model for significance analysis of ChIP-seq with negative control. Bioinform. 26 (9) (2010)
Songbo Huang, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Siu-Ming Yiu
Indexing Similar DNA Sequences. AAIM (2010)
Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong
Compressed Indexes for Approximate String Matching. Algorithmica 58 (2) (2010)
Jesper Jansson, Wing-Kin Sung
Constructing the R* Consensus Tree of Two Trees in Subcubic Time. ESA (1) (2010)
Vipin Narang, Ankush Mittal, Wing-Kin Sung
Localized motif discovery in gene regulatory sequences. Bioinform. 26 (9) (2010)
Hugo Willy, Fushan Song, Zeyar Aung, See-Kiong Ng, Wing-Kin Sung
SLiM on Diet: finding short linear motifs on domain interaction interfaces in Protein Data Bank. Bioinform. 26 (8) (2010)
Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung
Compressed random access memory CoRR (2010)
Jurek Czyzowicz, Stefan Dobrev, Leszek Gasieniec, David Ilcinkas, Jesper Jansson, Ralf Klasing, Ioannis Lignos, Russell A. Martin, Kunihiko Sadakane, Wing-Kin Sung
More Efficient Periodic Traversal in Anonymous Undirected Graphs. SIROCCO (2009)
Wing-Kai Hon, Kunihiko Sadakane, Wing-Kin Sung
Breaking a Time-and-Space Barrier in Constructing Full-Text Indices. SIAM J. Comput. 38 (6) (2009)
Sylvain Guillemot, Jesper Jansson, Wing-Kin Sung
Computing a Smallest Multi-labeled Phylogenetic Tree from Rooted Triplets. ISAAC (2009)
Thomas K. F. Wong, Siu-Ming Yiu, Tak Wah Lam, Wing-Kin Sung
The 2-Interval Pattern Matching Problems and Its Application to ncRNA Scanning. BICoB (2009)
Thomas K. F. Wong, Tak Wah Lam, Wing-Kin Sung, Siu-Ming Yiu
Structural Alignment of RNA with Complex Pseudoknot Structure. WABI (2009)
Frank Eisenhaber, Chee Keong Kwoh, See-Kiong Ng, Wing-Kin Sung, Limsoon Wong
Brief Overview of Bioinformatics Activities in Singapore. PLoS Comput. Biol. 5 (9) (2009)
Jurek Czyzowicz, Stefan Dobrev, Leszek Gasieniec, David Ilcinkas, Jesper Jansson, Ralf Klasing, Yannis Lignos, Russell A. Martin, Kunihiko Sadakane, Wing-Kin Sung
More efficient periodic traversal in anonymous undirected graphs CoRR (2009)
Viet Tung Hoang, Wing-Kin Sung
Fixed Parameter Polynomial Time Algorithms for Maximum Agreement and Compatible Supertrees. STACS (2008)
Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Chi-Kwong Wong, Siu-Ming Yiu
Compressed indexing and local alignment of DNA. Bioinform. 24 (6) (2008)
Han Xu, Chia-Lin Wei, Feng Lin, Wing-Kin Sung
An HMM approach to genome-wide identification of differential histone modification sites from ChIP-seq data. Bioinform. 24 (20) (2008)
Vinsensius B. Vega, Yijun Ruan, Wing-Kin Sung
A Streamlined and Generalized Analysis of Chromatin ImmunoPrecipitation Paired-End diTag Data. ICCS (3) (2008)

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Publication Activity (10 Years)

Top Topics

Top Venues

Wing-Kin Sung