Frank Eisenhaber

Publication Activity (10 Years)

Years Active: 1993-2023
Publications (10 Years): 4

Top Topics

Similarity Scores

Genome Sequencing

Protein Structural

International Conference

Top Venues

J. Bioinform. Comput. Biol.

Health Inf. Sci. Syst.

Publications

Arsen O. Batagov, Rinkoo Dalan, Andrew Wu, Wenbin Lai, Colin S. Tan, Frank Eisenhaber
Generalized metabolic flux analysis framework provides mechanism-based predictions of ophthalmic complications in type 2 diabetes patients. Health Inf. Sci. Syst. 11 (1) (2023)
Sebastian Maurer-Stroh, Nora L. Krutz, Petra S. Kern, Vithiagaran Gunalan, Minh N. Nguyen, Vachiranee Limviphuvadh, Frank Eisenhaber, G. Frank Gerberick
AllerCatPro - prediction of protein allergenicity potential from the protein sequence. Bioinform. 35 (17) (2019)
Weihong Tay, Erwin Tantoso, Frank Eisenhaber, Wing-Cheong Wong
Translational Informatics Management System (TIMS): Towards OMICS based clinical data management for long term curation of clinical studies. J. Open Source Softw. 4 (40) (2019)
Zhang Zhang, Jun Yu, Frank Eisenhaber, Xin Gao, Takashi Gojobori
In Memory of Vladimir B. Bajic (1952-2019). Genom. Proteom. Bioinform. 17 (5) (2019)
Westley Arthur Sherman, Durga Kuchibhatla, Vachiranee Limviphuvadh, Sebastian Maurer-Stroh, Birgit Eisenhaber, Frank Eisenhaber
HPMV: Human protein mutation viewer - relating sequence mutations to protein sequence architecture and function changes. J. Bioinform. Comput. Biol. 13 (5) (2015)
Frank Eisenhaber, Westley Arthur Sherman
10 years for the Journal of Bioinformatics and Computational Biology (2003-2013) - A retrospective. J. Bioinform. Comput. Biol. 12 (3) (2014)
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
Guest Editorial for the International Conference on Genome Informatics (GIW 2013). IEEE ACM Trans. Comput. Biol. Bioinform. 11 (1) (2014)
Wing-Cheong Wong, Sebastian Maurer-Stroh, Birgit Eisenhaber, Frank Eisenhaber
On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation. BMC Bioinform. 15 (2014)
Frank Eisenhaber
Unix interfaces, Kleisli, bucandin structure, etc. - The heroic beginning of bioinformatics in Singapore. J. Bioinform. Comput. Biol. 12 (3) (2014)
Jianmin Ma, Frank Eisenhaber, Sebastian Maurer-Stroh
Automatic phylogenetic Classification of bacterial beta-Lactamase Sequences including Structural and Antibiotic substrate Preference Information. J. Bioinform. Comput. Biol. 11 (6) (2013)
Alexander Goncearenco, Simon Mitternacht, Taipang Yong, Birgit Eisenhaber, Frank Eisenhaber, Igor N. Berezovsky
SPACER: server for predicting allosteric communication and effects of regulation. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Sebastian Maurer-Stroh, He Gao, Hao Han, Lies Baeten, Joost Schymkowitz, Frederic Rousseau, Louxin Zhang, Frank Eisenhaber
Motif Discovery with Data Mining in 3D protein Structure Databases: Discovery, Validation and Prediction of the U-Shape zinc binding ("Huf-zinc") Motif. J. Bioinform. Comput. Biol. 11 (1) (2013)
Sebastian Maurer-Stroh, Vithiagaran Gunalan, Wing-Cheong Wong, Frank Eisenhaber
A Simple Shortcut to Unsupervised Alignment-Free phylogenetic genome Groupings, even from Unassembled sequencing reads. J. Bioinform. Comput. Biol. 11 (6) (2013)
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions. BMC Syst. Biol. 7 (S-6) (2013)
Vladimir A. Kuznetsov, Hwee Kuan Lee, Sebastian Maurer-Stroh, Maria Judit Molnár, Sándor Pongor, Birgit Eisenhaber, Frank Eisenhaber
How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health. Health Inf. Sci. Syst. 1 (1) (2013)
Frank Eisenhaber, Wing-Kin Sung, Limsoon Wong
The 24th International Conference on genome Informatics, Giw2013, in Singapore. J. Bioinform. Comput. Biol. 11 (6) (2013)
Frank Eisenhaber
A Decade after the First Full Human genome sequencing: when will We Understand our Own genome? J. Bioinform. Comput. Biol. 10 (5) (2012)
Fernanda L. Sirota, Arsen O. Batagov, Georg Schneider, Birgit Eisenhaber, Frank Eisenhaber, Sebastian Maurer-Stroh
Beware of Moving targets: Reference proteome Content Fluctuates substantially over the Years. J. Bioinform. Comput. Biol. 10 (6) (2012)
Wing-Cheong Wong, Sebastian Maurer-Stroh, Georg Schneider, Frank Eisenhaber
Transmembrane helix: simple or complex. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Joshua Tan, Durga Kuchibhatla, Fernanda L. Sirota, Westley A. Sherman, Tobias Gattermayer, Chia Yee Kwoh, Frank Eisenhaber, Georg Schneider, Sebastian Maurer-Stroh
Tachyon search speeds up retrieval of similar sequences by several orders of magnitude. Bioinform. 28 (12) (2012)
Wing-Cheong Wong, Sebastian Maurer-Stroh, Frank Eisenhaber
The Janus-Faced E-Values of Hmmer2: Extreme Value Distribution or logistic Function? J. Bioinform. Comput. Biol. 9 (1) (2011)
Wing-Cheong Wong, Sebastian Maurer-Stroh, Frank Eisenhaber
More Than 1, 001 Problems with Protein Domain Databases: Transmembrane Regions, Signal Peptides and the Issue of Sequence Homology. PLoS Comput. Biol. 6 (7) (2010)
Vachiranee Limviphuvadh, Ling Ling Chua, Frank Eisenhaber, Sharmila Adhikari, Sebastian Maurer-Stroh
Is Lgi2 the Candidate Gene for Partial Epilepsy with Pericentral Spikes? J. Bioinform. Comput. Biol. 8 (1) (2010)
Frank Eisenhaber, Chee Keong Kwoh, See-Kiong Ng, Wing-Kin Sung, Limsoon Wong
Brief Overview of Bioinformatics Activities in Singapore. PLoS Comput. Biol. 5 (9) (2009)
Hong Sain Ooi, Chia Yee Kwoh, Michael Wildpaner, Fernanda L. Sirota, Birgit Eisenhaber, Sebastian Maurer-Stroh, Wing-Cheong Wong, Alexander Schleiffer, Frank Eisenhaber, Georg Schneider
protein sequence annotation. Nucleic Acids Res. 37 (Web-Server-Issue) (2009)
Sebastian Maurer-Stroh, Manfred Koranda, Wolfgang Benetka, Georg Schneider, Fernanda L. Sirota, Frank Eisenhaber
Towards Complete Sets of Farnesylated and Geranylgeranylated Proteins. PLoS Comput. Biol. 3 (4) (2007)
Maria Novatchkova, Georg Schneider, Richard Fritz, Frank Eisenhaber, Alexander Schleiffer
DOUTfinder - identification of distant domain outliers using subsignificant sequence similarity. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Georg Schneider, Georg Neuberger, Michael Wildpaner, Sun Tian, Igor N. Berezovsky, Frank Eisenhaber
Application of a sensitive collection heuristic for very large protein families: Evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases. BMC Bioinform. 7 (2006)
Maria Novatchkova, Michael Wildpaner, Dieter Schweizer, Frank Eisenhaber
PhyloDome - visualization of taxonomic distributions of domains occurring in eukaryote protein sequence sets. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Maria Novatchkova, Andreas Bachmair, Birgit Eisenhaber, Frank Eisenhaber
Proteins with two SUMO-like domains in chromatin-associated complexes: The RENi (Rad60-Esc2-NIP45) family. BMC Bioinform. 6 (2005)
Miklós Cserzo, Frank Eisenhaber, Birgit Eisenhaber, István Simon
TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter. Bioinform. 20 (1) (2004)
Frank Eisenhaber, Birgit Eisenhaber, Werner Kubina, Sebastian Maurer-Stroh, Georg Neuberger, Georg Schneider, Michael Wildpaner
Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-, NMT and PTS1. Nucleic Acids Res. 31 (13) (2003)
Stefan Washietl, Frank Eisenhaber
Reannotation of the CELO genome characterizes a set of previously unassigned open reading frames and points to novel modes of host interaction in avian adenoviruses. BMC Bioinform. 4 (2003)
Michael Wildpaner, Georg Schneider, Alexander Schleiffer, Frank Eisenhaber
Taxonomy workbench. Bioinform. 17 (12) (2001)
Frank Eisenhaber, Peer Bork
Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries. Bioinform. 15 (7) (1999)
Shamil R. Sunyaev, Igor V. Rodchenkov, Frank Eisenhaber, Eugene N. Kuznetsov
Analysis of the position dependent amino acid probabilities and its application to the search for remote homologues. RECOMB (1998)
Frank Eisenhaber, Philip Lijnzaad, Patrick Argos, Chris Sander, Michael Scharf
The Double Cubic Lattice Method: Efficient Approaches to Numerical Integration of Surface Area and Volume and to Dot Surface Contouring of Molecular Assemblies. J. Comput. Chem. 16 (3) (1995)
Frank Eisenhaber, Patrick Argos
Improved strategy in analytic surface calculation for molecular systems: Handling of singularities and computational efficiency. J. Comput. Chem. 14 (11) (1993)