István Simon

Publication Activity (10 Years)

Years Active: 1975-2022
Publications (10 Years): 3

Top Topics

Higher Education

Protein Function

Amino Acid Sequences

Computational Methods

Top Venues

Nucleic Acids Res.

Publications

István Simon, Rod Dilnutt, Boglárka Simon-Hatala, Bärbel Fürstenau
Connecting art and science information systems through embodiment with the aim to enhance the innovation competency of STEM students in Higher Education. ACIS (2022)
Éva Schád, Erzsébet Fichó, Rita Pancsa, István Simon, Zsuzsanna Dosztányi, Bálint Mészáros
DIBS: a repository of disordered binding sites mediating interactions with ordered proteins. Bioinform. 34 (3) (2018)
Erzsébet Fichó, István Reményi, István Simon, Bálint Mészáros
MFIB: a repository of protein complexes with mutual folding induced by binding. Bioinform. 33 (22) (2017)
Bálint Mészáros, István Simon, Zsuzsanna Dosztányi
Predicting functional sites in disordered proteins - implications in disease. IWBBIO (2014)
Dániel Kozma, István Simon, Gábor E. Tusnády
PDBTM: Protein Data Bank of transmembrane proteins after 8 years. Nucleic Acids Res. 41 (Database-Issue) (2013)
Dániel Kozma, István Simon, Gábor E. Tusnády
CMWeb: an interactive on-line tool for analysing residue-residue contacts and contact prediction methods. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Bálint Mészáros, Judit Tóth, Beáta G. Vértessy, Zsuzsanna Dosztányi, István Simon
s. PLoS Comput. Biol. 7 (7) (2011)
Zsuzsanna Dosztányi, Bálint Mészáros, István Simon
Bioinformatical approaches to characterize intrinsically disordered/unstructured proteins. Briefings Bioinform. 11 (2) (2010)
Bálint Mészáros, István Simon, Zsuzsanna Dosztányi
Prediction of Protein Binding Regions in Disordered Proteins. PLoS Comput. Biol. 5 (5) (2009)
Zsuzsanna Dosztányi, Bálint Mészáros, István Simon
ANCHOR: web server for predicting protein binding regions in disordered proteins. Bioinform. 25 (20) (2009)
Gábor E. Tusnády, Lajos Kalmár, Hédi Hegyi, Peter Tompa, István Simon
TOPDOM: database of domains and motifs with conservative location in transmembrane proteins. Bioinform. 24 (12) (2008)
Ágnes Tóth-Petróczy, Christopher J. Oldfield, István Simon, Yuichiro Takagi, A. Keith Dunker, Vladimir N. Uversky, Mónika Fuxreiter
Malleable Machines in Transcription Regulation: The Mediator Complex. PLoS Comput. Biol. 4 (12) (2008)
Gábor E. Tusnády, Lajos Kalmár, István Simon
TOPDB: topology data bank of transmembrane proteins. Nucleic Acids Res. 36 (Database-Issue) (2008)
Mónika Fuxreiter, Peter Tompa, István Simon
Local structural disorder imparts plasticity on linear motifs. Bioinform. 23 (8) (2007)
Tímea Polgár, Csaba Magyar, István Simon, György M. Keserü
Impact of Ligand Protonation on Virtual Screening against β-Secretase (BACE1). J. Chem. Inf. Model. 47 (6) (2007)
Tamás Arányi, András Váradi, István Simon, Gábor E. Tusnády
The BiSearch web server. BMC Bioinform. 7 (2006)
Csaba Magyar, M. Michael Gromiha, Gerard Pujadas, Gábor E. Tusnády, István Simon
SRide: a server for identifying stabilizing residues in proteins. Nucleic Acids Res. 33 (Web-Server-Issue) (2005)
Gábor E. Tusnády, Zsuzsanna Dosztányi, István Simon
TMDET: web server for detecting transmembrane regions of proteins by using their 3D coordinates. Bioinform. 21 (7) (2005)
Gábor E. Tusnády, Zsuzsanna Dosztányi, István Simon
PDB_TM: selection and membrane localization of transmembrane proteins in the protein data bank. Nucleic Acids Res. 33 (Database-Issue) (2005)
Zsuzsanna Dosztányi, Veronika Csizmok, Peter Tompa, István Simon
IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinform. 21 (16) (2005)
Miklós Cserzo, Frank Eisenhaber, Birgit Eisenhaber, István Simon
TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter. Bioinform. 20 (1) (2004)
Éva Tüdos, András Fiser, Ágnes Simon, Zsuzsanna Dosztányi, Mónika Fuxreiter, Csaba Magyar, István Simon
Noncovalent Cross-links in Context with Other Structural and Functional Elements of Proteins. J. Chem. Inf. Model. 44 (2) (2004)
Gábor E. Tusnády, Zsuzsanna Dosztányi, István Simon
Transmembrane proteins in the Protein Data Bank: identification and classification. Bioinform. 20 (17) (2004)
Jennifer L. Gardy, Cory Spencer, Ke Wang, Martin Ester, Gábor E. Tusnády, István Simon, Sujun Hua, Katalin de Fays, Christophe G. Lambert, Kenta Nakai, Fiona S. L. Brinkman
PSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria. Nucleic Acids Res. 31 (13) (2003)
Zsuzsanna Dosztányi, Csaba Magyar, Gábor E. Tusnády, Miklós Cserzo, András Fiser, István Simon
Servers for sequence-structure relationship analysis and prediction. Nucleic Acids Res. 31 (13) (2003)
Zsuzsanna Dosztányi, Csaba Magyar, Gábor E. Tusnády, István Simon
SCide: Identification of Stabilization Centers in Proteins. Bioinform. 19 (7) (2003)
Gábor E. Tusnády, István Simon
The HMMTOP transmembrane topology prediction server. Bioinform. 17 (9) (2001)
Gábor E. Tusnády, István Simon
Topology of Membrane Proteins. J. Chem. Inf. Comput. Sci. 41 (2) (2001)
András Fiser, István Simon
Predicting the oxidation state of cysteines by multiple sequence alignment. Bioinform. 16 (3) (2000)
András Fiser, Zsuzsanna Dosztányi, István Simon
The role of long-range interactions in defining the secondary structure of proteins is overestimated. Comput. Appl. Biosci. 13 (3) (1997)
Chi Fai Ho, Christopher L. Morgan, István Simon
An advanced classroom computing environment and its applications. SIGCSE (1993)
Béla Bollobás, István Simon
Probabilistic Analysis of Disjoint Set Union Algorithms. SIAM J. Comput. 22 (5) (1993)
Béla Bollobás, Andrei Z. Broder, István Simon
The Cost Distribution of Clustering in Random Probing J. ACM 37 (2) (1990)
Béla Bollobás, István Simon
On the Expected Behaviour of Disjoint Set Union Algorithms STOC (1985)
Béla Bollobás, István Simon
Repeated Random Insertion into a Priority Queue. J. Algorithms 6 (4) (1985)
István Simon, John Gill
Polynomial Reducibilities and Upward Diagonalizations STOC (1977)
John Gill, István Simon
Ink, Dirty-Tape Turing Machines, and Quasicomplexity Measures. ICALP (1976)
István Simon
Two results on polynomial-time reducibilities. SIGACT News 8 (1) (1976)
Thomas Porter, István Simon
Random Insertion into a Priority Queue Structure. IEEE Trans. Software Eng. 1 (3) (1975)