Localized motif discovery in gene regulatory sequences.
Vipin NarangAnkush MittalWing-Kin SungPublished in: Bioinform. (2010)
Keyphrases
- gene regulatory
- transcription factor binding sites
- motif discovery
- biological sequences
- regulatory networks
- binding sites
- dna sequences
- transcription factors
- pattern discovery
- data mining tasks
- gene expression
- gene regulatory networks
- sequence data
- sequence databases
- multiobjective optimization
- computational biology
- sequence alignment
- genome wide
- microarray
- similarity search
- genomic sequences
- gene regulation
- data model
- component analysis
- protein sequences
- high throughput
- text mining
- nearest neighbor