Guergana K. Savova

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 12

Top Topics

Clef Evaluation Campaign

Natural Language Processing

Top Venues

J. Am. Medical Informatics Assoc.

npj Digit. Medicine

Publications

Marco Guevara, Shan Chen, Spencer Thomas, Tafadzwa L. Chaunzwa, Idalid Franco, Benjamin H. Kann, Shalini Moningi, Jack M. Qian, Madeleine Goldstein, Susan Harper, Hugo J. W. L. Aerts, Paul J. Catalano, Guergana K. Savova, Raymond H. Mak, Danielle S. Bitterman
Large language models to identify social determinants of health in electronic health records. npj Digit. Medicine 7 (1) (2024)
Shan Chen, Yingya Li, Sheng Lu, Hoang Van, Hugo J. W. L. Aerts, Guergana K. Savova, Danielle S. Bitterman
Evaluating the ChatGPT family of models for biomedical reasoning and classification. J. Am. Medical Informatics Assoc. 31 (4) (2024)
Jon Z. Cai, Kristin Wright-Bettner, Martha Palmer, Guergana K. Savova, James H. Martin
Adapting Abstract Meaning Representation Parsing to the Clinical Narrative - the SPRING THYME parser. CoRR (2024)
Marco Guevara, Shan Chen, Spencer Thomas, Tafadzwa L. Chaunzwa, Idalid Franco, Benjamin H. Kann, Shalini Moningi, Jack M. Qian, Madeleine Goldstein, Susan Harper, Hugo J. W. L. Aerts, Guergana K. Savova, Raymond H. Mak, Danielle S. Bitterman
Large Language Models to Identify Social Determinants of Health in Electronic Health Records. CoRR (2023)
Shan Chen, Yingya Li, Sheng Lu, Hoang Van, Hugo J. W. L. Aerts, Guergana K. Savova, Danielle S. Bitterman
Evaluation of ChatGPT Family of Models for Biomedical Reasoning and Classification. CoRR (2023)
Shan Chen, Marco Guevara, Shalini Moningi, Frank Hoebers, Hesham Elhalawani, Benjamin H. Kann, Fallon E. Chipidza, Jonathan Leeman, Hugo J. W. L. Aerts, Timothy A. Miller, Guergana K. Savova, Raymond H. Mak, Maryam Lustberg, Majid Afshar, Danielle S. Bitterman
The impact of using an AI chatbot to respond to patient messages. CoRR (2023)
Shan Chen, Marco Guevara, Nicolas Ramirez, Arpi Murray, Jeremy L. Warner, Hugo J. W. L. Aerts, Timothy A. Miller, Guergana K. Savova, Raymond H. Mak, Danielle S. Bitterman
Natural language processing to automatically extract the presence and severity of esophagitis in notes of patients undergoing radiotherapy. CoRR (2023)
Alon Geva, Steven H. Abman, Shannon F. Manzi, Dunbar D. Ivy, Mary Mullen, John Griffin, Chen Lin, Guergana K. Savova, Kenneth D. Mandl
Adverse drug event rates in pediatric pulmonary hypertension: a comparison of real-world data sources. J. Am. Medical Informatics Assoc. 27 (2) (2020)
Natalia Viani, Timothy A. Miller, Carlo Napolitano, Silvia G. Priori, Guergana K. Savova, Riccardo Bellazzi, Lucia Sacchi
Supervised methods to extract clinical events from cardiology reports in Italian. J. Biomed. Informatics 95 (2019)
Natalia Viani, Timothy A. Miller, Dmitriy Dligach, Steven Bethard, Carlo Napolitano, Silvia G. Priori, Riccardo Bellazzi, Lucia Sacchi, Guergana K. Savova
Recurrent Neural Network Architectures for Event Extraction from Italian Medical Reports. AIME (2017)
Chen Lin, Dmitriy Dligach, Timothy A. Miller, Steven Bethard, Guergana K. Savova
Multilayered temporal modeling for the clinical domain. J. Am. Medical Informatics Assoc. 23 (2) (2016)
Stéphane M. Meystre, Hongfang Liu, Rong Xu, Sivaram Arabandi, Kavishwar B. Wagholikar, Jon Patrick, Guergana K. Savova, Chunhua Weng, Pierre Zweigenbaum, Dina Demner-Fushman, Özlem Uzuner, Hua Xu
Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'. AMIA (2016)
Noémie Elhadad, Sameer Pradhan, Sharon Lipsky Gorman, Suresh Manandhar, Wendy W. Chapman, Guergana K. Savova
SemEval-2015 Task 14: Analysis of Clinical Text. SemEval@NAACL-HLT (2015)
Chen Lin, Elizabeth W. Karlson, Dmitriy Dligach, Monica P. Ramirez, Timothy A. Miller, Huan Mo, Natalie S. Braggs, Andrew Cagan, Vivian S. Gainer, Joshua C. Denny, Guergana K. Savova
Automatic identification of methotrexate-induced liver toxicity in patients with rheumatoid arthritis from the electronic medical record. J. Am. Medical Informatics Assoc. 22 (e1) (2015)
Sumithra Velupillai, Danielle L. Mowery, Lee M. Christensen, Noemie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman
Disease/Disorder Semantic Template Filling - Information Extraction Challenge in the ShARe/CLEF eHealth Evaluation Lab 2014. AMIA (2014)
William F. Styler IV, Steven Bethard, Sean Finan, Martha Palmer, Sameer Pradhan, Piet C. de Groen, Bradley James Erickson, Timothy A. Miller, Chen Lin, Guergana K. Savova, James Pustejovsky
Temporal Annotation in the Clinical Domain. Trans. Assoc. Comput. Linguistics 2 (2014)
Danielle L. Mowery, Sumithra Velupillai, Brett R. South, Lee M. Christensen, David Martínez, Liadh Kelly, Lorraine Goeuriot, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman
Task 2: ShARe/CLEF eHealth Evaluation Lab 2014. CLEF (Working Notes) (2014)
Dmitriy Dligach, Steven Bethard, Lee Becker, Timothy A. Miller, Guergana K. Savova
Discovering body site and severity modifiers in clinical texts. J. Am. Medical Informatics Assoc. 21 (3) (2014)
Danielle L. Mowery, Brett R. South, Lee M. Christensen, Laura-Maria Murtola, Sanna Salanterä, Hanna Suominen, David Martínez, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman
Task 2: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) (2013)
Stephen T. Wu, Vinod Kaggal, Dmitriy Dligach, James J. Masanz, Pei J. Chen, Lee Becker, Wendy Webber Chapman, Guergana K. Savova, Hongfang Liu, Christopher G. Chute
A common type system for clinical natural language processing. J. Biomed. Semant. 4 (2013)
Sameer Pradhan, Noémie Elhadad, Brett R. South, David Martínez, Lee M. Christensen, Amy Vogel, Hanna Suominen, Wendy W. Chapman, Guergana K. Savova
Task 1: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) (2013)
Daniel Albright, Arrick Lanfranchi, Anwen Fredriksen, William F. Styler IV, Colin Warner, Jena D. Hwang, Jinho D. Choi, Dmitriy Dligach, Rodney D. Nielsen, James H. Martin, Wayne H. Ward, Martha Palmer, Guergana K. Savova
Towards comprehensive syntactic and semantic annotations of the clinical narrative. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Hanna Suominen, Sanna Salanterä, Sumithra Velupillai, Wendy Webber Chapman, Guergana K. Savova, Noemie Elhadad, Sameer Pradhan, Brett R. South, Danielle L. Mowery, Gareth J. F. Jones, Johannes Leveling, Liadh Kelly, Lorraine Goeuriot, David Martínez, Guido Zuccon
Overview of the ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (2013)
Timothy A. Miller, Dmitriy Dligach, Steven Bethard, Sameer Pradhan, Chen Lin, Guergana K. Savova
Discovering Time Expressions in Clinical Text. AMIA (2013)
Susan Rea, Jyotishman Pathak, Guergana K. Savova, Thomas A. Oniki, Les Westberg, Calvin E. Beebe, Cui Tao, Craig G. Parker, Peter J. Haug, Stanley M. Huff, Christopher G. Chute
Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: The SHARPn project. J. Biomed. Informatics 45 (4) (2012)
Jiaping Zheng, Wendy Webber Chapman, Timothy A. Miller, Chen Lin, Rebecca S. Crowley, Guergana K. Savova
A system for coreference resolution for the clinical narrative. J. Am. Medical Informatics Assoc. 19 (4) (2012)
Guergana K. Savova, Janet E. Olson, Sean P. Murphy, Victoria L. Cafourek, Fergus J. Couch, Matthew P. Goetz, James N. Ingle, Vera J. Suman, Christopher G. Chute, Richard M. Weinshilboum
Automated discovery of drug treatment patterns for endocrine therapy of breast cancer within an electronic medical record. J. Am. Medical Informatics Assoc. 19 (e1) (2012)
Wendy Webber Chapman, Guergana K. Savova, Jiaping Zheng, Melissa Tharp, Rebecca S. Crowley
Anaphoric reference in clinical reports: Characteristics of an annotated corpus. J. Biomed. Informatics 45 (3) (2012)
Wendy Webber Chapman, Prakash M. Nadkarni, Lynette Hirschman, Leonard W. D'Avolio, Guergana K. Savova, Özlem Uzuner
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions. J. Am. Medical Informatics Assoc. 18 (5) (2011)
Jiaping Zheng, Wendy Webber Chapman, Rebecca S. Crowley, Guergana K. Savova
Coreference resolution: A review of general methodologies and applications in the clinical domain. J. Biomed. Informatics 44 (6) (2011)
Guergana K. Savova, Wendy Webber Chapman, Jiaping Zheng, Rebecca S. Crowley
Anaphoric relations in the clinical narrative: corpus creation. J. Am. Medical Informatics Assoc. 18 (4) (2011)
Sunghwan Sohn, Jean-Pierre A. Kocher, Christopher G. Chute, Guergana K. Savova
Drug side effect extraction from clinical narratives of psychiatry and psychology patients. J. Am. Medical Informatics Assoc. 18 (Supplement) (2011)
Guergana K. Savova, James J. Masanz, Philip V. Ogren, Jiaping Zheng, Sunghwan Sohn, Karin Kipper Schuler, Christopher G. Chute
Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. J. Am. Medical Informatics Assoc. 17 (5) (2010)
Cui Tao, Harold R. Solbrig, Deepak K. Sharma, Wei-Qi Wei, Guergana K. Savova, Christopher G. Chute
Time-Oriented Question Answering from Clinical Narratives Using Semantic-Web Techniques. ISWC (2) (2010)
Rodney D. Nielsen, James J. Masanz, Philip V. Ogren, Wayne H. Ward, James H. Martin, Guergana K. Savova, Martha Palmer
An architecture for complex clinical question answering. IHI (2010)
Lionel T. E. Cheng, Jiaping Zheng, Guergana K. Savova, Bradley James Erickson
Discerning Tumor Status from Unstructured MRI Reports - Completeness of Information in Existing Reports and Utility of Automated Natural Language Processing. J. Digit. Imaging 23 (2) (2010)
Iftikhar J. Kullo, Jin Fan, Jyotishman Pathak, Guergana K. Savova, Zeenat Ali, Christopher G. Chute
Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease. J. Am. Medical Informatics Assoc. 17 (5) (2010)
Sunghwan Sohn, Guergana K. Savova
Mayo Clinic Smoking Status Classification System: Extensions and Improvements. AMIA (2009)
Anni Coden, Guergana K. Savova, Igor L. Sominsky, Michael A. Tanenblatt, James J. Masanz, Karin Schuler, James W. Cooper, Wei Guan, Piet C. de Groen
Automatically extracting cancer disease characteristics from pathology reports into a Disease Knowledge Representation Model. J. Biomed. Informatics 42 (5) (2009)
Guergana K. Savova, Anni Coden, Igor L. Sominsky, Rie Johnson, Philip V. Ogren, Piet C. de Groen, Christopher G. Chute
Word sense disambiguation across two domains: Biomedical literature and clinical notes. J. Biomed. Informatics 41 (6) (2008)
Guergana K. Savova, Philip V. Ogren, Patrick H. Duffy, James D. Buntrock, Christopher G. Chute
Technical Brief: Mayo Clinic NLP System for Patient Smoking Status Identification. J. Am. Medical Informatics Assoc. 15 (1) (2008)
Karin Schuler, Vinod Kaggal, James J. Masanz, Philip V. Ogren, Guergana K. Savova
System Evaluation on a Named Entity Corpus from Clinical Notes. LREC (2008)
Philip V. Ogren, Guergana K. Savova, Christopher G. Chute
Constructing Evaluation Corpora for Automated Clinical Named Entity Recognition. LREC (2008)
Guergana K. Savova, Joan Bachenko
Designing for errors: similarities and differences of disfluency rates and prosodic characteristics across domains. INTERSPEECH (2003)
Guergana K. Savova, Joan Bachenko
Prosodic features of four types of disfluencies. DiSS (2003)
Marcelline R. Harris, Guergana K. Savova, Thomas M. Johnson, Christopher G. Chute
A term extraction tool for expanding content in the domain of functioning, disability, and health: proof of concept. J. Biomed. Informatics 36 (4-5) (2003)
Guergana K. Savova, Marcelline R. Harris, Thomas M. Johnson, Serguei V. S. Pakhomov, Christopher G. Chute
A Data-Driven Approach for Extracting "the Most Specific Term" for Ontology Development. AMIA (2003)