Patrick H. Duffy

Publication Activity (10 Years)

Years Active: 2005-2016
Publications (10 Years): 1

Top Topics

Biological Data

Biologically Plausible

Data Mining Tools

Top Venues

Briefings Bioinform.

Publications

Steven N. Hart, Patrick H. Duffy, Daniel J. Quest, Asif Hossain, Michael A. Meiners, Jean-Pierre A. Kocher
VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files. Briefings Bioinform. 17 (2) (2016)
Jean-Pierre A. Kocher, Daniel J. Quest, Patrick H. Duffy, Michael A. Meiners, Raymond M. Moore, David N. Rider, Asif Hossain, Steven N. Hart, Valentin Dinu
The Biological Reference Repository (BioR): a rapid and flexible system for genomics annotation. Bioinform. 30 (13) (2014)
Yan W. Asmann, Sumit Middha, Asif Hossain, Saurabh Baheti, Ying Li, High-Seng Chai, Zhifu Sun, Patrick H. Duffy, Ahmed A. Hadad, Asha A. Nair, Xiaoyu Liu, Yuji Zhang, Eric W. Klee, Krishna R. Kalari, Jean-Pierre A. Kocher
TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data. Bioinform. 28 (2) (2012)
Guergana K. Savova, Philip V. Ogren, Patrick H. Duffy, James D. Buntrock, Christopher G. Chute
Technical Brief: Mayo Clinic NLP System for Patient Smoking Status Identification. J. Am. Medical Informatics Assoc. 15 (1) (2008)
Serguei V. S. Pakhomov, James D. Buntrock, Patrick H. Duffy
High Throughput Modularized NLP System for Clinical Text. ACL (2005)
Anni Coden, Sergey V. Pakhomov, Rie Kubota Ando, Patrick H. Duffy, Christopher G. Chute
Domain-specific language models and lexicons for tagging. J. Biomed. Informatics 38 (6) (2005)