Wendy Webber Chapman

Publication Activity (10 Years)

Years Active: 1999-2013
Publications (10 Years): 0

Top Topics

Domain Knowledge

Annotated Corpus

Top Venues

J. Biomed. Informatics

J. Am. Medical Informatics Assoc.

Publications

Jeffrey P. Ferraro, Hal Daumé III, Scott L. DuVall, Wendy Webber Chapman, Henk Harkema, Peter J. Haug
Improving performance of natural language processing part-of-speech tagging on clinical narratives through domain adaptation. J. Am. Medical Informatics Assoc. 20 (5) (2013)
Wendy Webber Chapman, Dieter Hillert, Sumithra Velupillai, Maria Kvist, Maria Skeppstedt, Brian E. Chapman, Mike Conway, Melissa Tharp, Danielle L. Mowery, Louise Deléger
Extending the NegEx Lexicon for Multiple Languages. MedInfo (2013)
Stephen T. Wu, Vinod Kaggal, Dmitriy Dligach, James J. Masanz, Pei J. Chen, Lee Becker, Wendy Webber Chapman, Guergana K. Savova, Hongfang Liu, Christopher G. Chute
A common type system for clinical natural language processing. J. Biomed. Semant. 4 (2013)
Guergana Savova, Wendy Webber Chapman, Noemie Elhadad, Martha Palmer
Panel: Shared Resources, Shared Code, and Shared Activities in Clinical Natural Language Processing. AMIA (2013)
Aron Henriksson, Mike Conway, Martin Duneld, Wendy Webber Chapman
Identifying Synonymy between SNOMED Clinical Terms of Varying Length Using Distributional Analysis of Electronic Health Records. AMIA (2013)
Mike Conway, John N. Dowling, Wendy Webber Chapman
Using chief complaints for syndromic surveillance: A review of chief complaint based classifiers in North America. J. Biomed. Informatics 46 (4) (2013)
Hanna Suominen, Sanna Salanterä, Sumithra Velupillai, Wendy Webber Chapman, Guergana K. Savova, Noemie Elhadad, Sameer Pradhan, Brett R. South, Danielle L. Mowery, Gareth J. F. Jones, Johannes Leveling, Liadh Kelly, Lorraine Goeuriot, David Martínez, Guido Zuccon
Overview of the ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (2013)
Lucila Ohno-Machado, Vineet Bafna, Aziz A. Boxwala, Brian E. Chapman, Wendy Webber Chapman, Kamalika Chaudhuri, Michele E. Day, Claudiu Farcas, Nathaniel D. Heintzman, Xiaoqian Jiang, Hyeoneui Kim, Jihoon Kim, Michael E. Matheny, Frederic S. Resnic, Staal A. Vinterbo
iDASH: integrating data for analysis, anonymization, and sharing. J. Am. Medical Informatics Assoc. 19 (2) (2012)
Mike Conway, Wendy Webber Chapman
Discovering Lexical Instantiations of Clinical Concepts using Web Services, WordNet and Corpus Resources. AMIA (2012)
Jiaping Zheng, Wendy Webber Chapman, Timothy A. Miller, Chen Lin, Rebecca S. Crowley, Guergana K. Savova
A system for coreference resolution for the clinical narrative. J. Am. Medical Informatics Assoc. 19 (4) (2012)
Wendy Webber Chapman, Guergana K. Savova, Jiaping Zheng, Melissa Tharp, Rebecca S. Crowley
Anaphoric reference in clinical reports: Characteristics of an annotated corpus. J. Biomed. Informatics 45 (3) (2012)
Brian E. Chapman, Wei Wei, Wendy Webber Chapman
The Frequency of ConText Lexical Items in Diverse Medical Texts. HISB (2012)
Danielle L. Mowery, Janyce Wiebe, Shyam Visweswaran, Henk Harkema, Wendy Webber Chapman
Building an automated SOAP classifier for emergency department reports. J. Biomed. Informatics 45 (1) (2012)
Hyeoneui Kim, Robert E. El-Kareh, Anupam Goel, F. N. U. Vineet, Wendy Webber Chapman
An approach to improve LOINC mapping through augmentation of local test names. J. Biomed. Informatics 45 (4) (2012)
Wendy Webber Chapman
Developing Resources to Assist in Development and Application of NLP to Clinical Texts. CLEF (Online Working Notes/Labs/Workshop) (2012)
Shazia Ashfaq, Amilcare Gentili, Wendy Webber Chapman, Brian E. Chapman
A Preliminary Approach for Creating a Semi-synthetic Multimodal Clinical Data Set from a Publicly Available Image Repository. AMIA (2012)
Brett R. South, Danielle L. Mowery, Óscar Ferrández, Shuying Shen, Ying Suo, Mingyuan Zhang, Annie Chen, Liqin Wang, Stéphane M. Meystre, Wendy Webber Chapman
On the Road Towards Developing a Publicly Available Corpus of De-identified Clinical Texts. AMIA (2012)
Danielle L. Mowery, Pamela W. Jordan, Janyce Wiebe, Wendy Webber Chapman, Lin Liu
Does Domain Knowledge Matter for Assertion Annotation in Clinical Texts? HISB (2012)
Wendy Webber Chapman, Prakash M. Nadkarni, Lynette Hirschman, Leonard W. D'Avolio, Guergana K. Savova, Özlem Uzuner
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions. J. Am. Medical Informatics Assoc. 18 (5) (2011)
Jiaping Zheng, Wendy Webber Chapman, Rebecca S. Crowley, Guergana K. Savova
Coreference resolution: A review of general methodologies and applications in the clinical domain. J. Biomed. Informatics 44 (6) (2011)
Henk Harkema, Wendy Webber Chapman, Melissa I. Saul, Evan S. Dellon, Robert E. Schoen, Ateev Mehrotra
Developing a natural language processing application for measuring the quality of colonoscopy procedures. J. Am. Medical Informatics Assoc. 18 (Supplement) (2011)
Brian E. Chapman, Sean Lee, Hyunseok Peter Kang, Wendy Webber Chapman
Document-level classification of CT pulmonary angiography reports based on an extension of the ConText algorithm. J. Biomed. Informatics 44 (5) (2011)
Guergana K. Savova, Wendy Webber Chapman, Jiaping Zheng, Rebecca S. Crowley
Anaphoric relations in the clinical narrative: corpus creation. J. Am. Medical Informatics Assoc. 18 (4) (2011)
Prakash M. Nadkarni, Lucila Ohno-Machado, Wendy Webber Chapman
Natural language processing: an introduction. J. Am. Medical Informatics Assoc. 18 (5) (2011)
Heather A. Piwowar, Wendy Webber Chapman
Public sharing of research datasets: A pilot study of associations. J. Informetrics 4 (2) (2010)
Wendy Webber Chapman, John N. Dowling, Atar Baer, David L. Buckeridge, Dennis Cochrane, Michael A. Conway, Peter L. Elkin, Jeremy U. Espino, Julia E. Gunn, Craig M. Hales, Lori Hutwagner, Mikaela Keller, Catherine Larson, Rebecca Noe, Anya Okhmatovskaia, Karen Olson, Marc Paladini, Matthew Scholer, Carol Sniegoski, David Thompson, Bill Lober
Developing syndrome definitions based on consensus and current use. J. Am. Medical Informatics Assoc. 17 (5) (2010)
Henk Harkema, John N. Dowling, Tyler Thornblade, Wendy Webber Chapman
ConText: An algorithm for determining negation, experiencer, and temporal status from clinical reports. J. Biomed. Informatics 42 (5) (2009)
Brett R. South, Shuying Shen, Makoto Jones, Jennifer H. Garvin, Matthew H. Samore, Wendy Webber Chapman, Adi V. Gundlapalli
Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease. BMC Bioinform. 10 (S-9) (2009)
Dina Demner-Fushman, Wendy Webber Chapman, Clement J. McDonald
What can natural language processing do for clinical decision support? J. Biomed. Informatics 42 (5) (2009)
Jeannie Yuhaniak Irwin, Henk Harkema, Lee M. Christensen, Titus Schleyer, Peter J. Haug, Wendy Webber Chapman
Methodology to Develop and Evaluate a Semantic Representation for NLP. AMIA (2009)
Wendy Webber Chapman, K. Bretonnel Cohen
Current issues in biomedical text mining and natural language processing. J. Biomed. Informatics 42 (5) (2009)
Wendy Webber Chapman, John N. Dowling, George Hripcsak
Evaluation of training with an annotation schema for manual annotation of clinical conditions from emergency department reports. Int. J. Medical Informatics 77 (2) (2008)
Heather A. Piwowar, Wendy Webber Chapman
A review of journal policies for sharing research data. ELPUB (2008)
Heather A. Piwowar, Wendy Webber Chapman
Identifying Data Sharing in Biomedical Literature. AMIA (2008)
Jagan Dara, John N. Dowling, Debbie A. Travers, Gregory F. Cooper, Wendy Webber Chapman
Evaluation of preprocessing techniques for chief complaint classification. J. Biomed. Informatics 41 (4) (2008)
Kaihong Liu, Wendy Webber Chapman, Rebecca Hwa, Rebecca S. Crowley
Methods Paper: Heuristic Sample Selection to Minimize Reference Standard Training Set for a Part-Of-Speech Tagger. J. Am. Medical Informatics Assoc. 14 (5) (2007)
Wendy Webber Chapman, John N. Dowling
Inductive creation of an annotation schema for manually indexing clinical conditions from emergency department reports. J. Biomed. Informatics 39 (2) (2006)
Wendy Webber Chapman, John N. Dowling, Michael M. Wagner
Research Paper: Generating a Reliable Reference Standard Set for Syndromic Case Classification. J. Am. Medical Informatics Assoc. 12 (6) (2005)
Wendy Webber Chapman, Lee M. Christensen, Michael M. Wagner, Peter J. Haug, Oleg Ivanov, John N. Dowling, Robert T. Olszewski
Classifying free-text triage chief complaints into syndromic categories with natural language processing. Artif. Intell. Medicine 33 (1) (2005)
Wendy Webber Chapman, John N. Dowling, Michael M. Wagner
Fever detection from free-text clinical records for biosurveillance. J. Biomed. Informatics 37 (2) (2004)
Per H. Gesteland, Reed M. Gardner, Fu-Chiang Tsui, Jeremy U. Espino, Robert T. Rolfs, Brent C. James, Wendy Webber Chapman, Andrew W. Moore, Michael M. Wagner
Application of Information Technology: Automated Syndromic Surveillance for the 2002 Winter Olympics. J. Am. Medical Informatics Assoc. 10 (6) (2003)
Wendy Webber Chapman, Gregory F. Cooper, Paul Hanbury, Brian E. Chapman, Lee H. Harrison, Michael M. Wagner
Research Paper: Creating a Text Classifier to Detect Radiology Reports Describing Mediastinal Findings Associated with Inhalational Anthrax and Other Disorders. J. Am. Medical Informatics Assoc. 10 (5) (2003)
Catherine Arnott-Smith, P. Zoë Stavri, Wendy Webber Chapman
In their own words? A terminological analysis of e-mail to a cancer information service. AMIA (2002)
Wendy Webber Chapman, Will Bridewell, Paul Hanbury, Gregory F. Cooper, Bruce G. Buchanan
A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries. J. Biomed. Informatics 34 (5) (2001)
Wendy Webber Chapman, Marcelo Fiszman, Brian E. Chapman, Peter J. Haug
A Comparison of Classification Algorithms to Automatically Identify Chest X-Ray Reports That Support Pneumonia. J. Biomed. Informatics 34 (1) (2001)
Marcelo Fiszman, Wendy Webber Chapman, Dominik Aronsky, R. Scott Evans, Peter J. Haug
Research Paper: Automatic Detection of Acute Bacterial Pneumonia from Chest X-ray Reports. J. Am. Medical Informatics Assoc. 7 (6) (2000)
Wendy Webber Chapman, Marcelo Fiszman, Peter J. Haug
Correct vs. Parsed Data for Inferring Pneumonia in Chest X-ray Reports. AMIA (1999)